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Items: 1 to 50 of 82

1.

Genetic associations of breast and prostate cancer are enriched for regulatory elements identified in disease-related tissues.

Chen H, Kichaev G, Bien SA, MacDonald JW, Wang L, Bammler TK, Auer P, Pasaniuc B, Lindström S.

Hum Genet. 2019 Oct;138(10):1091-1104. doi: 10.1007/s00439-019-02041-5. Epub 2019 Jun 22.

2.

α7 Nicotinic Acetylcholine Receptor Signaling Modulates Ovine Fetal Brain Astrocytes Transcriptome in Response to Endotoxin.

Cao M, MacDonald JW, Liu HL, Weaver M, Cortes M, Durosier LD, Burns P, Fecteau G, Desrochers A, Schulkin J, Antonelli MC, Bernier RA, Dorschner M, Bammler TK, Frasch MG.

Front Immunol. 2019 May 9;10:1063. doi: 10.3389/fimmu.2019.01063. eCollection 2019.

3.

PI3K-Yap activity drives cortical gyrification and hydrocephalus in mice.

Roy A, Murphy RM, Deng M, MacDonald JW, Bammler TK, Aldinger KA, Glass IA, Millen KJ.

Elife. 2019 May 16;8. pii: e45961. doi: 10.7554/eLife.45961.

4.

In utero exposure to diesel exhaust is associated with alterations in neonatal cardiomyocyte transcription, DNA methylation and metabolic perturbation.

Goodson JM, MacDonald JW, Bammler TK, Chien WM, Chin MT.

Part Fibre Toxicol. 2019 Apr 11;16(1):17. doi: 10.1186/s12989-019-0301-9.

5.

Autophagy accounts for approximately one-third of mitochondrial protein turnover and is protein selective.

Vincow ES, Thomas RE, Merrihew GE, Shulman NJ, Bammler TK, MacDonald JW, MacCoss MJ, Pallanck LJ.

Autophagy. 2019 Sep;15(9):1592-1605. doi: 10.1080/15548627.2019.1586258. Epub 2019 Mar 21.

PMID:
30865561
6.

Dried blood spot compared to plasma measurements of blood-based biomarkers of brain injury in neonatal encephalopathy.

Massaro AN, Wu YW, Bammler TK, MacDonald JW, Mathur A, Chang T, Mayock D, Mulkey SB, van Meurs K, Afsharinejad Z, Juul SE.

Pediatr Res. 2019 Apr;85(5):655-661. doi: 10.1038/s41390-019-0298-7. Epub 2019 Jan 19.

PMID:
30661082
7.

Human kidney on a chip assessment of polymyxin antibiotic nephrotoxicity.

Weber EJ, Lidberg KA, Wang L, Bammler TK, MacDonald JW, Li MJ, Redhair M, Atkins WM, Tran C, Hines KM, Herron J, Xu L, Monteiro MB, Ramm S, Vaidya V, Vaara M, Vaara T, Himmelfarb J, Kelly EJ.

JCI Insight. 2018 Dec 20;3(24). pii: 123673. doi: 10.1172/jci.insight.123673.

8.

Elevated CO2 impairs olfactory-mediated neural and behavioral responses and gene expression in ocean-phase coho salmon (Oncorhynchus kisutch).

Williams CR, Dittman AH, McElhany P, Busch DS, Maher MT, Bammler TK, MacDonald JW, Gallagher EP.

Glob Chang Biol. 2019 Mar;25(3):963-977. doi: 10.1111/gcb.14532. Epub 2018 Dec 18.

PMID:
30561876
9.

Human Organ-Specific Endothelial Cell Heterogeneity.

Marcu R, Choi YJ, Xue J, Fortin CL, Wang Y, Nagao RJ, Xu J, MacDonald JW, Bammler TK, Murry CE, Muczynski K, Stevens KR, Himmelfarb J, Schwartz SM, Zheng Y.

iScience. 2018 Jun 29;4:20-35. doi: 10.1016/j.isci.2018.05.003. Epub 2018 May 9.

10.

The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1.

Elsen GE, Bedogni F, Hodge RD, Bammler TK, MacDonald JW, Lindtner S, Rubenstein JLR, Hevner RF.

Front Neurosci. 2018 Aug 22;12:571. doi: 10.3389/fnins.2018.00571. eCollection 2018.

11.

Evidence of cardiac involvement in the fetal inflammatory response syndrome: disruption of gene networks programming cardiac development in nonhuman primates.

Mitchell T, MacDonald JW, Srinouanpranchanh S, Bammler TK, Merillat S, Boldenow E, Coleman M, Agnew K, Baldessari A, Stencel-Baerenwald JE, Tisoncik-Go J, Green RR, Gale MJ Jr, Rajagopal L, Adams Waldorf KM.

Am J Obstet Gynecol. 2018 Apr;218(4):438.e1-438.e16. doi: 10.1016/j.ajog.2018.01.009. Epub 2018 Feb 21.

12.

Human Cervical Mucus Plugs Exhibit Insufficiencies in Antimicrobial Activity Towards Group B Streptococcus.

Vornhagen J, Quach P, Santana-Ufret V, Alishetti V, Brokaw A, Armistead B, Qing Tang H, MacDonald JW, Bammler TK, Adams Waldorf KM, Uldbjerg N, Rajagopal L.

J Infect Dis. 2018 Apr 23;217(10):1626-1636. doi: 10.1093/infdis/jiy076.

13.

Impact of processing methods on urinary biomarkers analysis in neonates.

Starr MC, Askenazi DJ, Goldstein SL, MacDonald JW, Bammler TK, Afsharinejad Z, D Brophy P, Juul SE, Mayock DE, Hingorani SR.

Pediatr Nephrol. 2018 Jan;33(1):181-186. doi: 10.1007/s00467-017-3779-0. Epub 2017 Aug 19.

14.

In utero exposure to diesel exhaust particulates is associated with an altered cardiac transcriptional response to transverse aortic constriction and altered DNA methylation.

Goodson JM, Weldy CS, MacDonald JW, Liu Y, Bammler TK, Chien WM, Chin MT.

FASEB J. 2017 Nov;31(11):4935-4945. doi: 10.1096/fj.201700032R. Epub 2017 Jul 27.

15.

Genetic determinants of susceptibility to silver nanoparticle-induced acute lung inflammation in mice.

Scoville DK, Botta D, Galdanes K, Schmuck SC, White CC, Stapleton PL, Bammler TK, MacDonald JW, Altemeier WA, Hernandez M, Kleeberger SR, Chen LC, Gordon T, Kavanagh TJ.

FASEB J. 2017 Oct;31(10):4600-4611. doi: 10.1096/fj.201700187R. Epub 2017 Jul 17.

16.

Time Course of Inflammatory Gene Expression Following Crush Injury in Murine Skeletal Muscle.

Voss JG, Shagal AG, Tsuji JM, MacDonald JW, Bammler TK, Farin FM, St Pierre Schneider B.

Nurs Res. 2017 Mar/Apr;66(2):63-74. doi: 10.1097/NNR.0000000000000209.

PMID:
28252568
17.

Long-term outdoor air pollution and DNA methylation in circulating monocytes: results from the Multi-Ethnic Study of Atherosclerosis (MESA).

Chi GC, Liu Y, MacDonald JW, Barr RG, Donohue KM, Hensley MD, Hou L, McCall CE, Reynolds LM, Siscovick DS, Kaufman JD.

Environ Health. 2016 Dec 1;15(1):119.

18.

Group B Streptococcus circumvents neutrophils and neutrophil extracellular traps during amniotic cavity invasion and preterm labor.

Boldenow E, Gendrin C, Ngo L, Bierle C, Vornhagen J, Coleman M, Merillat S, Armistead B, Whidbey C, Alishetti V, Santana-Ufret V, Ogle J, Gough M, Srinouanprachanh S, MacDonald JW, Bammler TK, Bansal A, Liggitt HD, Rajagopal L, Adams Waldorf KM.

Sci Immunol. 2016 Oct;1(4). pii: eaah4576. doi: 10.1126/sciimmunol.aah4576. Epub 2016 Oct 14.

19.

From the Cover: Cadmium Exposure Differentially Alters Odorant-Driven Behaviors and Expression of Olfactory Receptors in Juvenile Coho Salmon (Oncorhynchus kisutch).

Williams CR, MacDonald JW, Bammler TK, Paulsen MH, Simpson CD, Gallagher EP.

Toxicol Sci. 2016 Dec;154(2):267-277. Epub 2016 Sep 11.

20.

A Novel Three-Dimensional Human Peritubular Microvascular System.

Ligresti G, Nagao RJ, Xue J, Choi YJ, Xu J, Ren S, Aburatani T, Anderson SK, MacDonald JW, Bammler TK, Schwartz SM, Muczynski KA, Duffield JS, Himmelfarb J, Zheng Y.

J Am Soc Nephrol. 2016 Aug;27(8):2370-81. doi: 10.1681/ASN.2015070747. Epub 2015 Dec 11.

21.

Histone Deacetylase Inhibitors Antagonize Distinct Pathways to Suppress Tumorigenesis of Embryonal Rhabdomyosarcoma.

Vleeshouwer-Neumann T, Phelps M, Bammler TK, MacDonald JW, Jenkins I, Chen EY.

PLoS One. 2015 Dec 4;10(12):e0144320. doi: 10.1371/journal.pone.0144320. eCollection 2015.

22.

Network analysis of microRNA and mRNA seasonal dynamics in a highly plastic sensorimotor neural circuit.

Larson TA, Lent KL, Bammler TK, MacDonald JW, Wood WE, Caras ML, Thatra NM, Budzillo A, Perkel DJ, Brenowitz EA.

BMC Genomics. 2015 Nov 6;16:905. doi: 10.1186/s12864-015-2175-z.

23.

Olfactory Transcriptional Analysis of Salmon Exposed to Mixtures of Chlorpyrifos and Malathion Reveal Novel Molecular Pathways of Neurobehavioral Injury.

Wang L, Espinoza HM, MacDonald JW, Bammler TK, Williams CR, Yeh A, Louie KW, Marcinek DJ, Gallagher EP.

Toxicol Sci. 2016 Jan;149(1):145-57. doi: 10.1093/toxsci/kfv223. Epub 2015 Oct 22.

24.

Choriodecidual Group B Streptococcal Infection Induces miR-155-5p in the Fetal Lung in Macaca nemestrina.

McAdams RM, Bierle CJ, Boldenow E, Weed S, Tsai J, Beyer RP, MacDonald JW, Bammler TK, Liggitt HD, Farin FM, Vanderhoeven J, Rajagopal L, Adams Waldorf KM.

Infect Immun. 2015 Oct;83(10):3909-17. doi: 10.1128/IAI.00695-15. Epub 2015 Jul 20.

25.

Transcriptional analysis of human cranial compartments with different embryonic origins.

Homayounfar N, Park SS, Afsharinejad Z, Bammler TK, MacDonald JW, Farin FM, Mecham BH, Cunningham ML.

Arch Oral Biol. 2015 Sep;60(9):1450-60. doi: 10.1016/j.archoralbio.2015.06.008. Epub 2015 Jul 2.

26.

Effect of Traumatic Brain Injury, Erythropoietin, and Anakinra on Hepatic Metabolizing Enzymes and Transporters in an Experimental Rat Model.

Anderson GD, Peterson TC, Vonder Haar C, Farin FM, Bammler TK, MacDonald JW, Kantor ED, Hoane MR.

AAPS J. 2015 Sep;17(5):1255-67. doi: 10.1208/s12248-015-9792-y. Epub 2015 Jun 12.

27.

Infant sex-specific placental cadmium and DNA methylation associations.

Mohanty AF, Farin FM, Bammler TK, MacDonald JW, Afsharinejad Z, Burbacher TM, Siscovick DS, Williams MA, Enquobahrie DA.

Environ Res. 2015 Apr;138:74-81. doi: 10.1016/j.envres.2015.02.004. Epub 2015 Feb 18.

28.

A Combination Therapy of Nicotinamide and Progesterone Improves Functional Recovery following Traumatic Brain Injury.

Peterson TC, Hoane MR, McConomy KS, Farin FM, Bammler TK, MacDonald JW, Kantor ED, Anderson GD.

J Neurotrauma. 2015 Jun 1;32(11):765-79. doi: 10.1089/neu.2014.3530. Epub 2015 Feb 26.

29.

Repeated gestational exposure of mice to chlorpyrifos oxon is associated with paraoxonase 1 (PON1) modulated effects in maternal and fetal tissues.

Cole TB, Li WF, Co AL, Hay AM, MacDonald JW, Bammler TK, Farin FM, Costa LG, Furlong CE.

Toxicol Sci. 2014 Oct;141(2):409-22. doi: 10.1093/toxsci/kfu144. Epub 2014 Jul 28.

30.

Comparison of the effect of minocycline and simvastatin on functional recovery and gene expression in a rat traumatic brain injury model.

Vonder Haar C, Anderson GD, Elmore BE, Moore LH, Wright AM, Kantor ED, Farin FM, Bammler TK, MacDonald JW, Hoane MR.

J Neurotrauma. 2014 May 15;31(10):961-75. doi: 10.1089/neu.2013.3119. Epub 2014 Jan 20.

31.

Comparison of the effects of erythropoietin and anakinra on functional recovery and gene expression in a traumatic brain injury model.

Anderson GD, Peterson TC, Vonder Haar C, Kantor ED, Farin FM, Bammler TK, Macdonald JW, Hoane MR.

Front Pharmacol. 2013 Oct 17;4:129. doi: 10.3389/fphar.2013.00129. eCollection 2013.

32.

Gestational age-dependent changes in gene expression of metabolic enzymes and transporters in pregnant mice.

Shuster DL, Bammler TK, Beyer RP, Macdonald JW, Tsai JM, Farin FM, Hebert MF, Thummel KE, Mao Q.

Drug Metab Dispos. 2013 Feb;41(2):332-42. doi: 10.1124/dmd.112.049718. Epub 2012 Nov 21. Erratum in: Drug Metab Dispos. 2013 Mar;41(3):682.

33.

Coagulation factor X activates innate immunity to human species C adenovirus.

Doronin K, Flatt JW, Di Paolo NC, Khare R, Kalyuzhniy O, Acchione M, Sumida JP, Ohto U, Shimizu T, Akashi-Takamura S, Miyake K, MacDonald JW, Bammler TK, Beyer RP, Farin FM, Stewart PL, Shayakhmetov DM.

Science. 2012 Nov 9;338(6108):795-8. doi: 10.1126/science.1226625. Epub 2012 Sep 27.

34.

Candidate genes for panhypopituitarism identified by gene expression profiling.

Mortensen AH, MacDonald JW, Ghosh D, Camper SA.

Physiol Genomics. 2011 Oct 6;43(19):1105-16. doi: 10.1152/physiolgenomics.00080.2011. Epub 2011 Aug 9.

35.

Genetics, gene expression and bioinformatics of the pituitary gland.

Davis SW, Potok MA, Brinkmeier ML, Carninci P, Lyons RH, MacDonald JW, Fleming MT, Mortensen AH, Egashira N, Ghosh D, Steel KP, Osamura RY, Hayashizaki Y, Camper SA.

Horm Res. 2009 Apr;71 Suppl 2:101-15. doi: 10.1159/000192447. Epub 2009 Apr 29.

36.

Regulator of sex-limitation KRAB zinc finger proteins modulate sex-dependent and -independent liver metabolism.

Krebs CJ, Khan S, MacDonald JW, Sorenson M, Robins DM.

Physiol Genomics. 2009 Jun 10;38(1):16-28. doi: 10.1152/physiolgenomics.90391.2008. Epub 2009 Apr 7.

37.

Discovery of transcriptional regulators and signaling pathways in the developing pituitary gland by bioinformatic and genomic approaches.

Brinkmeier ML, Davis SW, Carninci P, MacDonald JW, Kawai J, Ghosh D, Hayashizaki Y, Lyons RH, Camper SA.

Genomics. 2009 May;93(5):449-60. doi: 10.1016/j.ygeno.2008.11.010. Epub 2009 Feb 11.

38.

CXCL12 activates a robust transcriptional response in human prostate epithelial cells.

Begley LA, MacDonald JW, Day ML, Macoska JA.

J Biol Chem. 2007 Sep 14;282(37):26767-74. Epub 2007 Jul 12.

39.

CDX2 promotes anchorage-independent growth by transcriptional repression of IGFBP-3.

Chun SY, Chen F, Washburn JG, MacDonald JW, Innes KL, Zhao R, Cruz-Correa MR, Dang LH, Dang DT.

Oncogene. 2007 Jul 12;26(32):4725-9. Epub 2007 Feb 5.

PMID:
17297462
40.

COPA--cancer outlier profile analysis.

MacDonald JW, Ghosh D.

Bioinformatics. 2006 Dec 1;22(23):2950-1. Epub 2006 Aug 7.

PMID:
16895932
41.

CXCL12 overexpression and secretion by aging fibroblasts enhance human prostate epithelial proliferation in vitro.

Begley L, Monteleon C, Shah RB, Macdonald JW, Macoska JA.

Aging Cell. 2005 Dec;4(6):291-8.

42.

Regionally specific atrophy of the corpus callosum in AD, MCI and cognitive complaints.

Wang PJ, Saykin AJ, Flashman LA, Wishart HA, Rabin LA, Santulli RB, McHugh TL, MacDonald JW, Mamourian AC.

Neurobiol Aging. 2006 Nov;27(11):1613-7. Epub 2005 Nov 4.

43.

Concordant copy number and transcriptional activity of genes mapping to derivative chromosomes 8 during cellular immortalization in vitro.

Begley L, Keeney D, Beheshti B, Squire JA, Kant R, Chaib H, MacDonald JW, Rhim J, Macoska JA.

Genes Chromosomes Cancer. 2006 Feb;45(2):136-46.

44.

FLAIR lesion volume in multiple sclerosis: relation to processing speed and verbal memory.

Randolph JJ, Wishart HA, Saykin AJ, McDonald BC, Schuschu KR, MacDonald JW, Mamourian AC, Fadul CE, Ryan KA, Kasper LH.

J Int Neuropsychol Soc. 2005 Mar;11(2):205-9.

PMID:
15962708
45.

Deafness-related plasticity in the inferior colliculus: gene expression profiling following removal of peripheral activity.

Holt AG, Asako M, Lomax CA, MacDonald JW, Tong L, Lomax MI, Altschuler RA.

J Neurochem. 2005 Jun;93(5):1069-86.

46.

Evolution of 8p loss in transformed human prostate epithelial cells.

Macoska JA, Paris P, Collins C, Andaya A, Beheshti B, Chaib H, Kant R, Begley L, MacDonald JW, Squire JA.

Cancer Genet Cytogenet. 2004 Oct 1;154(1):36-43.

PMID:
15381370
47.

Injuries to Scottish farmers while tagging and clipping cattle: a cross-sectional survey.

Lindsay S, Selvaraj S, Macdonald JW, Godden DJ.

Occup Med (Lond). 2004 Mar;54(2):86-91.

PMID:
15020726
48.

Haploinsufficiency and reduced expression of genes localized to the 8p chromosomal region in human prostate tumors.

Chaib H, MacDonald JW, Vessella RL, Washburn JG, Quinn JE, Odman A, Rubin MA, Macoska JA.

Genes Chromosomes Cancer. 2003 Jul;37(3):306-13.

49.

Defibrillation by general practitioners: an audit of resuscitation in a Scottish rural practice.

Macdonald JW, Brewster MF, Isles CG.

Scott Med J. 1993 Jun;38(3):79-80.

PMID:
8356430
50.

Supervision of physician assistants and other health-care professionals. Physician responsibility.

MacDonald JW.

J Fla Med Assoc. 1993 Apr;80(4):261-4. No abstract available.

PMID:
8099366

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