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Decoding human fetal liver haematopoiesis.

Popescu DM, Botting RA, Stephenson E, Green K, Webb S, Jardine L, Calderbank EF, Polanski K, Goh I, Efremova M, Acres M, Maunder D, Vegh P, Gitton Y, Park JE, Vento-Tormo R, Miao Z, Dixon D, Rowell R, McDonald D, Fletcher J, Poyner E, Reynolds G, Mather M, Moldovan C, Mamanova L, Greig F, Young MD, Meyer KB, Lisgo S, Bacardit J, Fuller A, Millar B, Innes B, Lindsay S, Stubbington MJT, Kowalczyk MS, Li B, Ashenberg O, Tabaka M, Dionne D, Tickle TL, Slyper M, Rozenblatt-Rosen O, Filby A, Carey P, Villani AC, Roy A, Regev A, Chédotal A, Roberts I, Göttgens B, Behjati S, Laurenti E, Teichmann SA, Haniffa M.

Nature. 2019 Oct 9. doi: 10.1038/s41586-019-1652-y. [Epub ahead of print]


Single-cell landscape in mammary epithelium reveals bipotent-like cells associated with breast cancer risk and outcome.

Chen W, Morabito SJ, Kessenbrock K, Enver T, Meyer KB, Teschendorff AE.

Commun Biol. 2019 Aug 9;2:306. doi: 10.1038/s42003-019-0554-8. eCollection 2019.


BBKNN: Fast Batch Alignment of Single Cell Transcriptomes.

Polański K, Park JE, Young MD, Miao Z, Meyer KB, Teichmann SA.

Bioinformatics. 2019 Aug 10. pii: btz625. doi: 10.1093/bioinformatics/btz625. [Epub ahead of print]


Transfers to Hemodialysis Among US Patients Initiating Renal Replacement Therapy With Peritoneal Dialysis.

McGill RL, Weiner DE, Ruthazer R, Miskulin DC, Meyer KB, Lacson E Jr.

Am J Kidney Dis. 2019 Jul 10. pii: S0272-6386(19)30801-7. doi: 10.1053/j.ajkd.2019.05.014. [Epub ahead of print]


RTNduals: An R/Bioconductor package for analysis of co-regulation and inference of dual regulons.

Chagas VS, Groeneveld CS, Oliveira KG, Trefflich S, de Almeida RC, Ponder BAJ, Meyer KB, Jones SJM, Robertson AG, Castro MAA.

Bioinformatics. 2019 Jun 28. pii: btz534. doi: 10.1093/bioinformatics/btz534. [Epub ahead of print]


A cellular census of human lungs identifies novel cell states in health and in asthma.

Vieira Braga FA, Kar G, Berg M, Carpaij OA, Polanski K, Simon LM, Brouwer S, Gomes T, Hesse L, Jiang J, Fasouli ES, Efremova M, Vento-Tormo R, Talavera-López C, Jonker MR, Affleck K, Palit S, Strzelecka PM, Firth HV, Mahbubani KT, Cvejic A, Meyer KB, Saeb-Parsy K, Luinge M, Brandsma CA, Timens W, Angelidis I, Strunz M, Koppelman GH, van Oosterhout AJ, Schiller HB, Theis FJ, van den Berge M, Nawijn MC, Teichmann SA.

Nat Med. 2019 Jul;25(7):1153-1163. doi: 10.1038/s41591-019-0468-5. Epub 2019 Jun 17.


The Human Lung Cell Atlas: A High-Resolution Reference Map of the Human Lung in Health and Disease.

Schiller HB, Montoro DT, Simon LM, Rawlins EL, Meyer KB, Strunz M, Vieira Braga FA, Timens W, Koppelman GH, Budinger GRS, Burgess JK, Waghray A, van den Berge M, Theis FJ, Regev A, Kaminski N, Rajagopal J, Teichmann SA, Misharin AV, Nawijn MC.

Am J Respir Cell Mol Biol. 2019 Jul;61(1):31-41. doi: 10.1165/rcmb.2018-0416TR.


Effects of in utero and lactational exposure to phthalates on reproductive development and glycemic homeostasis in rats.

Venturelli AC, Meyer KB, Fischer SV, Kita DH, Philipsen RA, Morais RN, Martino Andrade AJ.

Toxicology. 2019 Jun 1;421:30-40. doi: 10.1016/j.tox.2019.03.008. Epub 2019 Mar 30.


RTNsurvival : An R/Bioconductor package for regulatory network survival analysis.

Groeneveld CS, Chagas VS, Jones SJM, Robertson AG, Ponder BAJ, Meyer KB, Castro MAA.

Bioinformatics. 2019 Mar 28. pii: btz229. doi: 10.1093/bioinformatics/btz229. [Epub ahead of print]


Improving CKD-Specific Patient-Reported Measures of Health-Related Quality of Life.

Ware JE Jr, Richardson MM, Meyer KB, Gandek B.

J Am Soc Nephrol. 2019 Apr;30(4):664-677. doi: 10.1681/ASN.2018080814. Epub 2019 Mar 21.


Integrated Care for People with Kidney Disease: The Perspective of a Nonprofit Dialysis Provider.

Johnson DS, Meyer KB.

Clin J Am Soc Nephrol. 2019 Mar 7;14(3):448-450. doi: 10.2215/CJN.13641118. Epub 2019 Jan 29. No abstract available.


Genome-wide CRISPR Screens in T Helper Cells Reveal Pervasive Crosstalk between Activation and Differentiation.

Henriksson J, Chen X, Gomes T, Ullah U, Meyer KB, Miragaia R, Duddy G, Pramanik J, Yusa K, Lahesmaa R, Teichmann SA.

Cell. 2019 Feb 7;176(4):882-896.e18. doi: 10.1016/j.cell.2018.11.044. Epub 2019 Jan 10.


Leading Integrated Kidney Care Entities of the Future.

Johnson DS, Meyer KB.

Adv Chronic Kidney Dis. 2018 Nov;25(6):523-529. doi: 10.1053/j.ackd.2018.09.001. Review.


Hemodialysis patient characteristics associated with better experience as measured by the In-center Hemodialysis Consumer Assessment of Healthcare Providers and Systems (ICH CAHPS) survey.

Dad T, Tighiouart H, Lacson E Jr, Meyer KB, Weiner DE, Richardson MM.

BMC Nephrol. 2018 Nov 28;19(1):340. doi: 10.1186/s12882-018-1147-3.


Single-cell reconstruction of the early maternal-fetal interface in humans.

Vento-Tormo R, Efremova M, Botting RA, Turco MY, Vento-Tormo M, Meyer KB, Park JE, Stephenson E, Polański K, Goncalves A, Gardner L, Holmqvist S, Henriksson J, Zou A, Sharkey AM, Millar B, Innes B, Wood L, Wilbrey-Clark A, Payne RP, Ivarsson MA, Lisgo S, Filby A, Rowitch DH, Bulmer JN, Wright GJ, Stubbington MJT, Haniffa M, Moffett A, Teichmann SA.

Nature. 2018 Nov;563(7731):347-353. doi: 10.1038/s41586-018-0698-6. Epub 2018 Nov 14.


Genome-wide analyses reveal the IRE1a-XBP1 pathway promotes T helper cell differentiation by resolving secretory stress and accelerating proliferation.

Pramanik J, Chen X, Kar G, Henriksson J, Gomes T, Park JE, Natarajan K, Meyer KB, Miao Z, McKenzie ANJ, Mahata B, Teichmann SA.

Genome Med. 2018 Oct 24;10(1):76. doi: 10.1186/s13073-018-0589-3.


High-Dose Seasonal Influenza Vaccine in Patients Undergoing Dialysis.

Miskulin DC, Weiner DE, Tighiouart H, Lacson EK Jr, Meyer KB, Dad T, Manley HJ.

Clin J Am Soc Nephrol. 2018 Nov 7;13(11):1703-1711. doi: 10.2215/CJN.03390318. Epub 2018 Oct 23.


Evaluation of non-response to the In-Center Hemodialysis Consumer Assessment of Healthcare Providers and Systems (ICH CAHPS) survey.

Dad T, Tighiouart H, Fenton JJ, Lacson E Jr, Meyer KB, Miskulin DC, Weiner DE, Richardson MM.

BMC Health Serv Res. 2018 Oct 19;18(1):790. doi: 10.1186/s12913-018-3618-4.


Characterizing Approaches to Dialysis Decision Making with Older Adults: A Qualitative Study of Nephrologists.

Ladin K, Pandya R, Perrone RD, Meyer KB, Kannam A, Loke R, Oskoui T, Weiner DE, Wong JB.

Clin J Am Soc Nephrol. 2018 Aug 7;13(8):1188-1196. doi: 10.2215/CJN.01740218. Epub 2018 Jul 26.


Unexpected, ubiquitous exposure of pregnant Brazilian women to diisopentyl phthalate, one of the most potent antiandrogenic phthalates.

Bertoncello Souza M, Passoni MT, Pälmke C, Meyer KB, Venturelli AC, Araújo G, de Castilhos BS, Morais RN, Dalsenter PR, Swan SH, Koch HM, Martino-Andrade AJ.

Environ Int. 2018 Oct;119:447-454. doi: 10.1016/j.envint.2018.06.042. Epub 2018 Jul 20.


Mate value discrepancies, the Dark Triad and relationship satisfaction: A Euclidean distances approach.

Goetz CD, Meyer KB.

Evol Psychol Sci. 2018 Jun;4(2):134-140. doi: 10.1007/s40806-017-0122-8. Epub 2017 Sep 27.


Delaying and Averting Dialysis Treatment: Patient Protection or Moral Hazard?

Johnson DS, Meyer KB.

Am J Kidney Dis. 2018 Aug;72(2):251-254. doi: 10.1053/j.ajkd.2018.01.042. Epub 2018 Mar 14. No abstract available.


Discussing Conservative Management With Older Patients With CKD: An Interview Study of Nephrologists.

Ladin K, Pandya R, Kannam A, Loke R, Oskoui T, Perrone RD, Meyer KB, Weiner DE, Wong JB.

Am J Kidney Dis. 2018 May;71(5):627-635. doi: 10.1053/j.ajkd.2017.11.011. Epub 2018 Feb 1.


A Peer-to-Peer Mentoring Program for In-Center Hemodialysis: A Patient-Centered Quality Improvement Program.

St Clair Russell J, Southerland S, Huff ED, Thomson M, Meyer KB, Lynch JR.

Nephrol Nurs J. 2017 Nov-Dec;44(6):481-496.


Identification of a Critical Window for Ganciclovir-Induced Disruption of Testicular Development in Rats.

Meyer KB, Martino Andrade AJ, Venturelli AC, Kita DH, Machado DLB, Adams Philipsen R, do Nascimento Silva AA, Cantão I, Moreira DL, da Silva Junior VA, Stumpp T, Morais RN.

Toxicol Sci. 2018 Apr 1;162(2):488-498. doi: 10.1093/toxsci/kfx276.


ERα Binding by Transcription Factors NFIB and YBX1 Enables FGFR2 Signaling to Modulate Estrogen Responsiveness in Breast Cancer.

Campbell TM, Castro MAA, de Oliveira KG, Ponder BAJ, Meyer KB.

Cancer Res. 2018 Jan 15;78(2):410-421. doi: 10.1158/0008-5472.CAN-17-1153. Epub 2017 Nov 27.


Amazing and Fantastic Infection Control: The Case of Dialyzer Reuse.

Gabbay E, Meyer KB.

Am J Kidney Dis. 2017 Jun;69(6):717-719. doi: 10.1053/j.ajkd.2017.03.003. No abstract available.


The Use of a Multidimensional Measure of Dialysis Adequacy-Moving beyond Small Solute Kinetics.

Perl J, Dember LM, Bargman JM, Browne T, Charytan DM, Flythe JE, Hickson LJ, Hung AM, Jadoul M, Lee TC, Meyer KB, Moradi H, Shafi T, Teitelbaum I, Wong LP, Chan CT; American Society of Nephrology Dialysis Advisory Group.

Clin J Am Soc Nephrol. 2017 May 8;12(5):839-847. doi: 10.2215/CJN.08460816. Epub 2017 Mar 17. Review.


BaalChIP: Bayesian analysis of allele-specific transcription factor binding in cancer genomes.

de Santiago I, Liu W, Yuan K, O'Reilly M, Chilamakuri CS, Ponder BA, Meyer KB, Markowetz F.

Genome Biol. 2017 Feb 24;18(1):39. doi: 10.1186/s13059-017-1165-7.


Long-term experiences of Norwegian live kidney donors: qualitative in-depth interviews.

Meyer KB, Bjørk IT, Wahl AK, Lennerling A, Andersen MH.

BMJ Open. 2017 Feb 16;7(2):e014072. doi: 10.1136/bmjopen-2016-014072.


Antihypertensive medications and risk of death and hospitalizations in US hemodialysis patients: Evidence from a cohort study to inform hypertension treatment practices.

Shafi T, Sozio SM, Luly J, Bandeen-Roche KJ, St Peter WL, Ephraim PL, McDermott A, Herzog CA, Crews DC, Scialla JJ, Tangri N, Miskulin DC, Michels WM, Jaar BG, Zager PG, Meyer KB, Wu AW, Boulware LE; DEcIDE Network Patient Outcomes in End Stage Renal Disease Study Investigators.

Medicine (Baltimore). 2017 Feb;96(5):e5924. doi: 10.1097/MD.0000000000005924.


Identification of Post-Transcriptional Modulators of Breast Cancer Transcription Factor Activity Using MINDy.

Campbell TM, Castro MA, Ponder BA, Meyer KB.

PLoS One. 2016 Dec 20;11(12):e0168770. doi: 10.1371/journal.pone.0168770. eCollection 2016.


Vascular imaging for hemodialysis vascular access planning.

McGill RL, Ruthazer R, Lacson E Jr, Meyer KB, Miskulin DC, Weiner DE.

Hemodial Int. 2017 Oct;21(4):490-497. doi: 10.1111/hdi.12513. Epub 2016 Nov 20.


Manipulation of pre and postnatal androgen environments and anogenital distance in rats.

Kita DH, Meyer KB, Venturelli AC, Adams R, Machado DL, Morais RN, Swan SH, Gennings C, Martino-Andrade AJ.

Toxicology. 2016 Aug 10;368-369:152-161. doi: 10.1016/j.tox.2016.08.021. Epub 2016 Sep 14.


Intravenous iron administration strategies and anemia management in hemodialysis patients.

Michels WM, Jaar BG, Ephraim PL, Liu Y, Miskulin DC, Tangri N, Crews DC, Scialla JJ, Shafi T, Sozio SM, Bandeen-Roche K, Cook CJ, Meyer KB, Boulware LE; DEcIDE Network Patient Outcomes in End Stage Renal Disease Study Investigators.

Nephrol Dial Transplant. 2017 Jan 1;32(1):173-181. doi: 10.1093/ndt/gfw316.


Comparison of techniques for culture of dialysis water and fluid.

Maltais JB, Meyer KB, Foster MC.

Hemodial Int. 2017 Apr;21(2):197-205. doi: 10.1111/hdi.12477. Epub 2016 Sep 5.


Peripherally Inserted Central Catheters and Hemodialysis Outcomes.

McGill RL, Ruthazer R, Meyer KB, Miskulin DC, Weiner DE.

Clin J Am Soc Nephrol. 2016 Aug 8;11(8):1434-40. doi: 10.2215/CJN.01980216. Epub 2016 Jun 23.


FGFR2 risk SNPs confer breast cancer risk by augmenting oestrogen responsiveness.

Campbell TM, Castro MAA, de Santiago I, Fletcher MNC, Halim S, Prathalingam R, Ponder BAJ, Meyer KB.

Carcinogenesis. 2016 Aug;37(8):741-750. doi: 10.1093/carcin/bgw065. Epub 2016 May 28.


Germline polymorphisms in an enhancer of PSIP1 are associated with progression-free survival in epithelial ovarian cancer.

French JD, Johnatty SE, Lu Y, Beesley J, Gao B, Kalimutho M, Henderson MJ, Russell AJ, Kar S, Chen X, Hillman KM, Kaufmann S, Sivakumaran H, O'Reilly M, Wang C, Korbie DJ; Australian Ovarian Cancer Study Group; Australian Ovarian Cancer Study, Lambrechts D, Despierre E, Van Nieuwenhuysen E, Lambrechts S, Vergote I, Karlan B, Lester J, Orsulic S, Walsh C, Fasching PA, Beckmann MW, Ekici AB, Hein A, Matsuo K, Hosono S, Pisterer J, Hillemanns P, Nakanishi T, Yatabe Y, Goodman MT, Lurie G, Matsuno RK, Thompson PJ, Pejovic T, Bean Y, Heitz F, Harter P, du Bois A, Schwaab I, Hogdall E, Kjaer SK, Jensen A, Hogdall C, Lundvall L, Engelholm SA, Brown B, Flanagan JM, Metcalf MD, Siddiqui N, Sellers T, Fridley B, Cunningham J, Schildkraut JM, Iversen E, Weber RP, Brennan D, Berchuck A, Pharoah P, Harnett P, Norris MD, Haber M, Goode EL, Lee JS, Khanna KK, Meyer KB, Chenevix-Trench G, deFazio A, Edwards SL, MacGregor S; Ovarian Cancer Association Consortium.

Oncotarget. 2016 Feb 9;7(6):6353-68. doi: 10.18632/oncotarget.7047.


Going Upstream: Coordination to Improve CKD Care.

Johnson DS, Kapoian T, Taylor R, Meyer KB.

Semin Dial. 2016 Mar-Apr;29(2):125-34. doi: 10.1111/sdi.12461. Epub 2016 Jan 14.


Regulators of genetic risk of breast cancer identified by integrative network analysis.

Castro MA, de Santiago I, Campbell TM, Vaughn C, Hickey TE, Ross E, Tilley WD, Markowetz F, Ponder BA, Meyer KB.

Nat Genet. 2016 Jan;48(1):12-21. doi: 10.1038/ng.3458. Epub 2015 Nov 30.


Evidence Underlying KDIGO (Kidney Disease: Improving Global Outcomes) Guideline Recommendations: A Systematic Review.

Alseiari M, Meyer KB, Wong JB.

Am J Kidney Dis. 2016 Mar;67(3):417-22. doi: 10.1053/j.ajkd.2015.09.016. Review.


Satisfaction with Care of Patients on Hemodialysis.

Richardson MM, Paine SS, Grobert ME, Stidley CA, Gabbay E, Harford AM, Zager PG, Miskulin DC, Meyer KB.

Clin J Am Soc Nephrol. 2015 Aug 7;10(8):1428-34. doi: 10.2215/CJN.11241114. Epub 2015 Jun 30.


Dialysate fluid endotoxin: assaying claims to cleanliness.

Meyer KB.

Am J Kidney Dis. 2015 Jun;65(6):817-9. doi: 10.1053/j.ajkd.2015.03.003. No abstract available.


Infection prevention and the medical director: uncharted territory.

Kapoian T, Meyer KB, Johnson DS.

Clin J Am Soc Nephrol. 2015 May 7;10(5):863-74. doi: 10.2215/CJN.06050614. Epub 2015 Feb 20. Review.


Randomized controlled trials 3: Measurement and analysis of patient-reported outcomes.

Richardson MM, Grobert ME, Meyer KB.

Methods Mol Biol. 2015;1281:191-206. doi: 10.1007/978-1-4939-2428-8_11.


Fine-scale mapping of the 5q11.2 breast cancer locus reveals at least three independent risk variants regulating MAP3K1.

Glubb DM, Maranian MJ, Michailidou K, Pooley KA, Meyer KB, Kar S, Carlebur S, O'Reilly M, Betts JA, Hillman KM, Kaufmann S, Beesley J, Canisius S, Hopper JL, Southey MC, Tsimiklis H, Apicella C, Schmidt MK, Broeks A, Hogervorst FB, van der Schoot CE, Muir K, Lophatananon A, Stewart-Brown S, Siriwanarangsan P, Fasching PA, Ruebner M, Ekici AB, Beckmann MW, Peto J, dos-Santos-Silva I, Fletcher O, Johnson N, Pharoah PD, Bolla MK, Wang Q, Dennis J, Sawyer EJ, Tomlinson I, Kerin MJ, Miller N, Burwinkel B, Marme F, Yang R, Surowy H, Guénel P, Truong T, Menegaux F, Sanchez M, Bojesen SE, Nordestgaard BG, Nielsen SF, Flyger H, González-Neira A, Benitez J, Zamora MP, Arias Perez JI, Anton-Culver H, Neuhausen SL, Brenner H, Dieffenbach AK, Arndt V, Stegmaier C, Meindl A, Schmutzler RK, Brauch H, Ko YD, Brüning T; GENICA Network, Nevanlinna H, Muranen TA, Aittomäki K, Blomqvist C, Matsuo K, Ito H, Iwata H, Tanaka H, Dörk T, Bogdanova NV, Helbig S, Lindblom A, Margolin S, Mannermaa A, Kataja V, Kosma VM, Hartikainen JM; kConFab Investigators, Wu AH, Tseng CC, Van Den Berg D, Stram DO, Lambrechts D, Zhao H, Weltens C, van Limbergen E, Chang-Claude J, Flesch-Janys D, Rudolph A, Seibold P, Radice P, Peterlongo P, Barile M, Capra F, Couch FJ, Olson JE, Hallberg E, Vachon C, Giles GG, Milne RL, McLean C, Haiman CA, Henderson BE, Schumacher F, Le Marchand L, Simard J, Goldberg MS, Labrèche F, Dumont M, Teo SH, Yip CH, See MH, Cornes B, Cheng CY, Ikram MK, Kristensen V; Norwegian Breast Cancer Study, Zheng W, Halverson SL, Shrubsole M, Long J, Winqvist R, Pylkäs K, Jukkola-Vuorinen A, Kauppila S, Andrulis IL, Knight JA, Glendon G, Tchatchou S, Devilee P, Tollenaar RA, Seynaeve C, Van Asperen CJ, García-Closas M, Figueroa J, Chanock SJ, Lissowska J, Czene K, Klevebring D, Darabi H, Eriksson M, Hooning MJ, Hollestelle A, Martens JW, Collée JM, Hall P, Li J, Humphreys K, Shu XO, Lu W, Gao YT, Cai H, Cox A, Cross SS, Reed MW, Blot W, Signorello LB, Cai Q, Shah M, Ghoussaini M, Kang D, Choi JY, Park SK, Noh DY, Hartman M, Miao H, Lim WY, Tang A, Hamann U, Torres D, Jakubowska A, Lubinski J, Jaworska K, Durda K, Sangrajrang S, Gaborieau V, Brennan P, McKay J, Olswold C, Slager S, Toland AE, Yannoukakos D, Shen CY, Wu PE, Yu JC, Hou MF, Swerdlow A, Ashworth A, Orr N, Jones M, Pita G, Alonso MR, Álvarez N, Herrero D, Tessier DC, Vincent D, Bacot F, Luccarini C, Baynes C, Ahmed S, Healey CS, Brown MA, Ponder BA, Chenevix-Trench G, Thompson DJ, Edwards SL, Easton DF, Dunning AM, French JD.

Am J Hum Genet. 2015 Jan 8;96(1):5-20. doi: 10.1016/j.ajhg.2014.11.009. Epub 2014 Dec 18.


Intravenous iron exposure and mortality in patients on hemodialysis.

Miskulin DC, Tangri N, Bandeen-Roche K, Zhou J, McDermott A, Meyer KB, Ephraim PL, Michels WM, Jaar BG, Crews DC, Scialla JJ, Sozio SM, Shafi T, Wu AW, Cook C, Boulware LE; Developing Evidence to Inform Decisions about Effectiveness (DEcIDE) Network Patient Outcomes in End Stage Renal Disease Study Investigators.

Clin J Am Soc Nephrol. 2014 Nov 7;9(11):1930-9. doi: 10.2215/CJN.03370414. Epub 2014 Oct 15.


Incentives for caution: the in-center hemodialysis consumer assessment of healthcare providers and systems survey and experience of care.

Gabbay E, Meyer KB.

Clin J Am Soc Nephrol. 2014 Jun 6;9(6):1005-6. doi: 10.2215/CJN.03950414. Epub 2014 May 15. No abstract available.

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