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Items: 1 to 50 of 501

1.

Prevalent, persistent anal HPV infection and squamous intraepithelial lesions: Findings from a cohort of men living with HIV in South Africa.

Chikandiwa A, Pisa PT, Tamalet C, Muller EE, Michelow P, Chersich MF, Mayaud P, Delany-Moretlwe S.

PLoS One. 2019 Dec 5;14(12):e0225571. doi: 10.1371/journal.pone.0225571. eCollection 2019.

2.

Clinical Characteristics of Mycoplasma genitalium and the Usefulness of Syndromic Management Among Women Living With Human Immunodeficiency Virus.

Ong JJ, Magooa MP, Chikandiwa A, Kelly H, Didelot MN, Muller EE, Maseko V, Segondy M, Delany-Moretlwe S, Kularatne R, Mayaud P; HARP Study Group.

Sex Transm Dis. 2019 Dec;46(12):801-804. doi: 10.1097/OLQ.0000000000001054.

PMID:
31764768
3.

Clinical characteristics of Mycoplasma genitalium and the usefulness of syndromic management among women living with HIV.

Ong JJ, Magooa MP, Chikandiwa A, Kelly H, Didelot MN, Muller EE, Maseko V, Segondy M, Delany-Moretlwe S, Kularatne R, Mayaud P; HARP Study Group*.

Sex Transm Dis. 2019 Jul 25. doi: 10.1097/OLQ.0000000000001054. [Epub ahead of print]

PMID:
31356531
4.

Determining Microbial Niche Breadth in the Environment for Better Ecosystem Fate Predictions.

Muller EEL.

mSystems. 2019 Jun 11;4(3). pii: e00080-19. doi: 10.1128/mSystems.00080-19.

5.

The Prevalence of Mycoplasma genitalium and Association With Human Immunodeficiency Virus Infection in Symptomatic Patients, Johannesburg, South Africa, 2007-2014.

Mahlangu MP, Müller EE, Venter JME, Maseko DV, Kularatne RS.

Sex Transm Dis. 2019 Jun;46(6):395-399. doi: 10.1097/OLQ.0000000000000984.

6.

Exercise training prior to night shift work improves physical work capacity and arterial stiffness.

Schäfer C, Mayr B, Müller EE, Augner C, Hannemann J, Böger RH, Schönfelder M, Niebauer J.

Eur J Prev Cardiol. 2019 May 8:2047487319848196. doi: 10.1177/2047487319848196. [Epub ahead of print] No abstract available.

PMID:
31067130
7.

Incidence, Persistence, Clearance, and Correlates of Genital Human Papillomavirus Infection and Anogenital Warts in a Cohort of Men Living With Human Immunodeficiency Virus in South Africa.

Chikandiwa A, Pisa PT, Muller EE, Tamalet C, Mayaud P, Chersich MF, Delany-Moretlwe S.

Sex Transm Dis. 2019 May;46(5):347-353. doi: 10.1097/OLQ.0000000000000979.

8.

Incidence, persistence, clearance and correlates of genital human papillomavirus infection and anogenital warts in a cohort of men living with HIV South Africa.

Chikandiwa A, Pisa PT, Muller EE, Tamalet C, Mayaud P, Chersich MF, Delany-Moretlwe S.

Sex Transm Dis. 2019 Feb 20. doi: 10.1097/OLQ.0000000000000979. [Epub ahead of print]

PMID:
30801450
9.

The prevalence of Mycoplasma genitalium and association with HIV infection in symptomatic patients, Johannesburg, South Africa, 2007-2014.

Mahlangu MP, Müller EE, Venter JM, Maseko DV, Kularatne RS.

Sex Transm Dis. 2019 Feb 11. doi: 10.1097/OLQ.0000000000000984. [Epub ahead of print]

PMID:
30762718
10.

Macrolide and fluoroquinolone resistance-associated mutations in Mycoplasma genitalium in Johannesburg, South Africa, 2007-2014.

Muller EE, Mahlangu MP, Lewis DA, Kularatne RS.

BMC Infect Dis. 2019 Feb 13;19(1):148. doi: 10.1186/s12879-019-3797-6.

11.

Prevalence and Antimicrobial Resistance of Mycoplasma genitalium Infection Among Women Living With Human Immunodeficiency Virus in South Africa: A Prospective Cohort Study.

Ong JJ, Magooa MP, Chikandiwa A, Kelly H, Didelot MN, Muller EE, Maseko V, Segondy M, Delany-Moretlwe S, Kularatne R, Mayaud P; HIV in Africa Research Partnership Study Group .

Clin Infect Dis. 2019 Aug 16;69(5):873-876. doi: 10.1093/cid/ciz045.

PMID:
30698679
12.

Comparison of an in-house real-time duplex PCR assay with commercial HOLOGIC® APTIMA assays for the detection of Neisseria gonorrhoeae and Chlamydia trachomatis in urine and extra-genital specimens.

Venter JME, Mahlangu PM, Müller EE, Lewis DA, Rebe K, Struthers H, McIntyre J, Kularatne RS.

BMC Infect Dis. 2019 Jan 3;19(1):6. doi: 10.1186/s12879-018-3629-0.

13.

Exercise responsive micro ribonucleic acids identify patients with coronary artery disease.

Mayr B, Müller EE, Schäfer C, Droese S, Breitenbach-Koller H, Schönfelder M, Niebauer J.

Eur J Prev Cardiol. 2019 Mar;26(4):348-355. doi: 10.1177/2047487318808014. Epub 2018 Oct 29.

PMID:
30373378
14.

Sequential Isolation of DNA, RNA, Protein, and Metabolite Fractions from Murine Organs and Intestinal Contents for Integrated Omics of Host-Microbiota Interactions.

Shah P, Muller EEL, Lebrun LA, Wampach L, Wilmes P.

Methods Mol Biol. 2018;1841:279-291. doi: 10.1007/978-1-4939-8695-8_19.

PMID:
30259493
15.

Expressed protein profile of a Tectomicrobium and other microbial symbionts in the marine sponge Aplysina aerophoba as evidenced by metaproteomics.

Chaib De Mares M, Jiménez DJ, Palladino G, Gutleben J, Lebrun LA, Muller EEL, Wilmes P, Sipkema D, van Elsas JD.

Sci Rep. 2018 Aug 7;8(1):11795. doi: 10.1038/s41598-018-30134-0.

16.

A year of monitoring 20 mesophilic full-scale bioreactors reveals the existence of stable but different core microbiomes in bio-waste and wastewater anaerobic digestion systems.

Calusinska M, Goux X, Fossépré M, Muller EEL, Wilmes P, Delfosse P.

Biotechnol Biofuels. 2018 Jul 19;11:196. doi: 10.1186/s13068-018-1195-8. eCollection 2018.

17.

Trends in the relative prevalence of genital ulcer disease pathogens and association with HIV infection in Johannesburg, South Africa, 2007-2015.

Kularatne RS, Muller EE, Maseko DV, Kufa-Chakezha T, Lewis DA.

PLoS One. 2018 Apr 4;13(4):e0194125. doi: 10.1371/journal.pone.0194125. eCollection 2018.

18.

Oropharyngeal HPV infection: prevalence and sampling methods among HIV-infected men in South Africa.

Chikandiwa A, Pisa PT, Chersich MF, Muller EE, Mayaud P, Delany-Moretlwe S.

Int J STD AIDS. 2018 Jul;29(8):776-780. doi: 10.1177/0956462418755882. Epub 2018 Feb 22.

19.

First draft genome sequence of a strain belonging to the Zoogloea genus and its gene expression in situ.

Muller EEL, Narayanasamy S, Zeimes M, Laczny CC, Lebrun LA, Herold M, Hicks ND, Gillece JD, Schupp JM, Keim P, Wilmes P.

Stand Genomic Sci. 2017 Oct 18;12:64. doi: 10.1186/s40793-017-0274-y. eCollection 2017.

20.

Prevalence of anogenital HPV infection, related disease and risk factors among HIV-infected men in inner-city Johannesburg, South Africa: baseline findings from a cohort study.

Chikandiwa A, Chimoyi L, Pisa PT, Chersich MF, Muller EE, Michelow P, Mayaud P, Delany-Moretlwe S.

BMC Public Health. 2017 Jul 4;17(Suppl 3):425. doi: 10.1186/s12889-017-4354-0.

21.

Genome Sequence of the Dichloromethane-Degrading Bacterium Hyphomicrobium sp. Strain GJ21.

Bringel F, Postema CP, Mangenot S, Bibi-Triki S, Chaignaud P, Farhan Ul Haque M, Gruffaz C, Hermon L, Louhichi Y, Maucourt B, Muller EEL, Nadalig T, Lajus A, Rouy Z, Médigue C, Barbe V, Janssen DB, Vuilleumier S.

Genome Announc. 2017 Jul 27;5(30). pii: e00622-17. doi: 10.1128/genomeA.00622-17.

22.

Integrated meta-omic analyses of the gastrointestinal tract microbiome in patients undergoing allogeneic hematopoietic stem cell transplantation.

Kaysen A, Heintz-Buschart A, Muller EEL, Narayanasamy S, Wampach L, Laczny CC, Graf N, Simon A, Franke K, Bittenbring J, Wilmes P, Schneider JG.

Transl Res. 2017 Aug;186:79-94.e1. doi: 10.1016/j.trsl.2017.06.008. Epub 2017 Jun 20.

23.

Colonization and Succession within the Human Gut Microbiome by Archaea, Bacteria, and Microeukaryotes during the First Year of Life.

Wampach L, Heintz-Buschart A, Hogan A, Muller EEL, Narayanasamy S, Laczny CC, Hugerth LW, Bindl L, Bottu J, Andersson AF, de Beaufort C, Wilmes P.

Front Microbiol. 2017 May 2;8:738. doi: 10.3389/fmicb.2017.00738. eCollection 2017.

24.

Alpine Skiing as Winter-Time High-Intensity Training.

Stöggl TL, Schwarzl C, Müller EE, Nagasaki M, Stöggl J, Schönfelder M, Niebauer J.

Med Sci Sports Exerc. 2017 Sep;49(9):1859-1867. doi: 10.1249/MSS.0000000000001289.

PMID:
28398944
25.

Hopanoid-free Methylobacterium extorquens DM4 overproduces carotenoids and has widespread growth impairment.

Bradley AS, Swanson PK, Muller EE, Bringel F, Caroll SM, Pearson A, Vuilleumier S, Marx CJ.

PLoS One. 2017 Mar 20;12(3):e0173323. doi: 10.1371/journal.pone.0173323. eCollection 2017.

26.

IMP: a pipeline for reproducible reference-independent integrated metagenomic and metatranscriptomic analyses.

Narayanasamy S, Jarosz Y, Muller EE, Heintz-Buschart A, Herold M, Kaysen A, Laczny CC, Pinel N, May P, Wilmes P.

Genome Biol. 2016 Dec 16;17(1):260.

27.

The prevalence of human papillomavirus infections and associated risk factors in men-who-have-sex-with-men in Cape Town, South Africa.

Müller EE, Rebe K, Chirwa TF, Struthers H, McIntyre J, Lewis DA.

BMC Infect Dis. 2016 Aug 22;16(1):440. doi: 10.1186/s12879-016-1706-9.

28.

Identification, Recovery, and Refinement of Hitherto Undescribed Population-Level Genomes from the Human Gastrointestinal Tract.

Laczny CC, Muller EE, Heintz-Buschart A, Herold M, Lebrun LA, Hogan A, May P, de Beaufort C, Wilmes P.

Front Microbiol. 2016 Jun 21;7:884. doi: 10.3389/fmicb.2016.00884. eCollection 2016.

29.

Effects of a 12-week alpine skiing intervention on endothelial progenitor cells, peripheral arterial tone and endothelial biomarkers in the elderly.

Niederseer D, Steidle-Kloc E, Mayr M, Müller EE, Cadamuro J, Patsch W, Dela F, Müller E, Niebauer J.

Int J Cardiol. 2016 Jul 1;214:343-7. doi: 10.1016/j.ijcard.2016.03.229. Epub 2016 Apr 2.

PMID:
27085126
30.

A Comparison between Alpine Skiing, Cross-Country Skiing and Indoor Cycling on Cardiorespiratory and Metabolic Response.

Stöggl T, Schwarzl C, Müller EE, Nagasaki M, Stöggl J, Scheiber P, Schönfelder M, Niebauer J.

J Sports Sci Med. 2016 Feb 23;15(1):184-95. eCollection 2016 Mar.

31.

Effects of skiing on cardiorespiratory and metabolic responses in middle-aged subjects with increased cardiovascular risk.

Stöggl T, Schwarzl C, Müller EE, Nagasaki M, Stöggl J, Scheiber P, Schönfelder M, Niebauer J.

Int J Cardiol. 2016 Jan 15;203:618-20. doi: 10.1016/j.ijcard.2015.11.016. Epub 2015 Nov 4. No abstract available.

PMID:
26580342
32.

In situ phenotypic heterogeneity among single cells of the filamentous bacterium Candidatus Microthrix parvicella.

Sheik AR, Muller EE, Audinot JN, Lebrun LA, Grysan P, Guignard C, Wilmes P.

ISME J. 2016 May;10(5):1274-9. doi: 10.1038/ismej.2015.181. Epub 2015 Oct 27.

33.

Comparative integrated omics: identification of key functionalities in microbial community-wide metabolic networks.

Roume H, Heintz-Buschart A, Muller EEL, May P, Satagopam VP, Laczny CC, Narayanasamy S, Lebrun LA, Hoopmann MR, Schupp JM, Gillece JD, Hicks ND, Engelthaler DM, Sauter T, Keim PS, Moritz RL, Wilmes P.

NPJ Biofilms Microbiomes. 2015 Jun 17;1:15007. doi: 10.1038/npjbiofilms.2015.7. eCollection 2015.

34.

Integrated omics for the identification of key functionalities in biological wastewater treatment microbial communities.

Narayanasamy S, Muller EE, Sheik AR, Wilmes P.

Microb Biotechnol. 2015 May;8(3):363-8. doi: 10.1111/1751-7915.12255. Epub 2015 Feb 12.

35.

Community-integrated omics links dominance of a microbial generalist to fine-tuned resource usage.

Muller EE, Pinel N, Laczny CC, Hoopmann MR, Narayanasamy S, Lebrun LA, Roume H, Lin J, May P, Hicks ND, Heintz-Buschart A, Wampach L, Liu CM, Price LB, Gillece JD, Guignard C, Schupp JM, Vlassis N, Baliga NS, Moritz RL, Keim PS, Wilmes P.

Nat Commun. 2014 Nov 26;5:5603. doi: 10.1038/ncomms6603.

36.

Mycoplasma genitalium is associated with increased genital HIV type 1 RNA in Zimbabwean women.

Napierala Mavedzenge S, Müller EE, Lewis DA, Chipato T, Morrison CS, Weiss HA.

J Infect Dis. 2015 May 1;211(9):1388-98. doi: 10.1093/infdis/jiu644. Epub 2014 Nov 17.

PMID:
25404521
37.

Lipid-based biofuel production from wastewater.

Muller EE, Sheik AR, Wilmes P.

Curr Opin Biotechnol. 2014 Dec;30:9-16. doi: 10.1016/j.copbio.2014.03.007. Epub 2014 Apr 23. Review.

38.

Systematic design of 18S rRNA gene primers for determining eukaryotic diversity in microbial consortia.

Hugerth LW, Muller EE, Hu YO, Lebrun LA, Roume H, Lundin D, Wilmes P, Andersson AF.

PLoS One. 2014 Apr 22;9(4):e95567. doi: 10.1371/journal.pone.0095567. eCollection 2014. Erratum in: PLoS One. 2015;10(1):e0117636.

39.

Genes of the N-methylglutamate pathway are essential for growth of Methylobacterium extorquens DM4 with monomethylamine.

Gruffaz C, Muller EE, Louhichi-Jelail Y, Nelli YR, Guichard G, Bringel F.

Appl Environ Microbiol. 2014 Jun;80(11):3541-50. doi: 10.1128/AEM.04160-13. Epub 2014 Mar 28.

40.

A hundred years of activated sludge: time for a rethink.

Sheik AR, Muller EE, Wilmes P.

Front Microbiol. 2014 Mar 3;5:47. doi: 10.3389/fmicb.2014.00047. eCollection 2014.

41.

Sequential isolation of metabolites, RNA, DNA, and proteins from the same unique sample.

Roume H, Heintz-Buschart A, Muller EE, Wilmes P.

Methods Enzymol. 2013;531:219-36. doi: 10.1016/B978-0-12-407863-5.00011-3.

PMID:
24060123
42.

Condensing the omics fog of microbial communities.

Muller EE, Glaab E, May P, Vlassis N, Wilmes P.

Trends Microbiol. 2013 Jul;21(7):325-33. doi: 10.1016/j.tim.2013.04.009. Epub 2013 Jun 10.

PMID:
23764387
43.

Determination of Neisseria gonorrhoeae susceptibility to ciprofloxacin in clinical specimens from men using a real-time PCR assay.

Magooa MP, Müller EE, Gumede L, Lewis DA.

Int J Antimicrob Agents. 2013 Jul;42(1):63-7. doi: 10.1016/j.ijantimicag.2013.02.026. Epub 2013 Apr 24.

PMID:
23623337
44.

Phenotypic and genetic characterization of the first two cases of extended-spectrum-cephalosporin-resistant Neisseria gonorrhoeae infection in South Africa and association with cefixime treatment failure.

Lewis DA, Sriruttan C, Müller EE, Golparian D, Gumede L, Fick D, de Wet J, Maseko V, Coetzee J, Unemo M.

J Antimicrob Chemother. 2013 Jun;68(6):1267-70. doi: 10.1093/jac/dkt034. Epub 2013 Feb 14.

PMID:
23416957
45.

Anorexigenic postprandial responses of PYY and GLP1 to slow ice cream consumption: preservation in obese adolescents, but not in obese adults.

Rigamonti AE, Agosti F, Compri E, Giunta M, Marazzi N, Muller EE, Cella SG, Sartorio A.

Eur J Endocrinol. 2013 Feb 20;168(3):429-36. doi: 10.1530/EJE-12-0867. Print 2013 Mar.

PMID:
23239758
46.

Genome sequence of "Candidatus Microthrix parvicella" Bio17-1, a long-chain-fatty-acid-accumulating filamentous actinobacterium from a biological wastewater treatment plant.

Muller EE, Pinel N, Gillece JD, Schupp JM, Price LB, Engelthaler DM, Levantesi C, Tandoi V, Luong K, Baliga NS, Korlach J, Keim PS, Wilmes P.

J Bacteriol. 2012 Dec;194(23):6670-1. doi: 10.1128/JB.01765-12.

47.

Growth hormone variants: a potential avenue for a better diagnostic characterization of growth hormone deficiency in children.

Rigamonti AE, Bozzola M, Banfi G, Meazza C, Müller EE, Cella SG.

J Endocrinol Invest. 2012 Nov;35(10):937-44. doi: 10.3275/8647. Epub 2012 Oct 1. Review.

PMID:
23027770
48.

GH and cortisol responses following an acute session of respiratory muscle endurance training in severely obese patients.

Sartorio A, Agosti F, Patrizi A, Gattico A, Tringali G, Giunta M, Muller EE, Rigamonti AE.

Horm Metab Res. 2013 Mar;45(3):239-44. doi: 10.1055/s-0032-1323767. Epub 2012 Sep 12.

PMID:
22972178
49.

Complete genome sequences of six strains of the genus Methylobacterium.

Marx CJ, Bringel F, Chistoserdova L, Moulin L, Farhan Ul Haque M, Fleischman DE, Gruffaz C, Jourand P, Knief C, Lee MC, Muller EE, Nadalig T, Peyraud R, Roselli S, Russ L, Goodwin LA, Ivanova N, Kyrpides N, Lajus A, Land ML, Médigue C, Mikhailova N, Nolan M, Woyke T, Stolyar S, Vorholt JA, Vuilleumier S.

J Bacteriol. 2012 Sep;194(17):4746-8. doi: 10.1128/JB.01009-12.

50.

GH responses to two consecutive bouts of respiratory muscle endurance training in healthy adults.

Sartorio A, Agosti F, Patrizi A, Tringali G, Marazzi N, Giunta M, Muller EE, Rigamonti AE.

J Endocrinol Invest. 2013 Apr;36(4):255-60. doi: 10.3275/8523. Epub 2012 Jul 24.

PMID:
22842679

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