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Items: 1 to 50 of 507

1.

Genetic Control of Root Architectural Plasticity in Maize.

Schneider HM, Klein SP, Hanlon MT, Nord EA, Kaeppler S, Brown KM, Warry A, Bhosale R, Lynch JP.

J Exp Bot. 2020 Feb 21. pii: eraa084. doi: 10.1093/jxb/eraa084. [Epub ahead of print]

PMID:
32080722
2.

Long-lived regulatory T cells generated during severe bronchiolitis in infancy influence later progression to asthma.

Lynch JP, Werder RB, Curren BF, Sikder MAA, Ullah A, Sebina I, Rashid RB, Zhang V, Upham JW, Hill GR, Steptoe RJ, Phipps S.

Mucosal Immunol. 2020 Feb 17. doi: 10.1038/s41385-020-0268-8. [Epub ahead of print]

PMID:
32066837
3.

Multiscale computational models can guide experimentation and targeted measurements for crop improvement.

Benes B, Guan K, Lang M, Long SP, Lynch JP, Marshall-Colón A, Peng B, Schnable J, Sweetlove L, Turk M.

Plant J. 2020 Feb 13. doi: 10.1111/tpj.14722. [Epub ahead of print]

PMID:
32053236
4.

Maize genomes to fields (G2F): 2014-2017 field seasons: genotype, phenotype, climatic, soil, and inbred ear image datasets.

McFarland BA, AlKhalifah N, Bohn M, Bubert J, Buckler ES, Ciampitti I, Edwards J, Ertl D, Gage JL, Falcon CM, Flint-Garcia S, Gore MA, Graham C, Hirsch CN, Holland JB, Hood E, Hooker D, Jarquin D, Kaeppler SM, Knoll J, Kruger G, Lauter N, Lee EC, Lima DC, Lorenz A, Lynch JP, McKay J, Miller ND, Moose SP, Murray SC, Nelson R, Poudyal C, Rocheford T, Rodriguez O, Romay MC, Schnable JC, Schnable PS, Scully B, Sekhon R, Silverstein K, Singh M, Smith M, Spalding EP, Springer N, Thelen K, Thomison P, Tuinstra M, Wallace J, Walls R, Wills D, Wisser RJ, Xu W, Yeh CT, de Leon N.

BMC Res Notes. 2020 Feb 12;13(1):71. doi: 10.1186/s13104-020-4922-8.

5.

Mucormycosis.

Reid G, Lynch JP 3rd, Fishbein MC, Clark NM.

Semin Respir Crit Care Med. 2020 Feb;41(1):99-114. doi: 10.1055/s-0039-3401992. Epub 2020 Jan 30.

PMID:
32000287
6.

Omadacycline: A Novel Oral and Intravenous Aminomethylcycline Antibiotic Agent.

Zhanel GG, Esquivel J, Zelenitsky S, Lawrence CK, Adam HJ, Golden A, Hink R, Berry L, Schweizer F, Zhanel MA, Bay D, Lagacé-Wiens PRS, Walkty AJ, Lynch JP 3rd, Karlowsky JA.

Drugs. 2020 Feb;80(3):285-313. doi: 10.1007/s40265-020-01257-4. Review.

PMID:
31970713
7.

Understanding Misdemeanor Enforcement: The Roles of Calls for Service and Community Characteristics.

Glazener EM, Kozlowski MM, Lynch JP, Smith JS.

J Community Psychol. 2020 Jan;48(1):13-35. doi: 10.1002/jcop.22285. Epub 2019 Dec 9.

PMID:
31816100
8.

Capillary Proliferation in Systemic-Sclerosis-Related Pulmonary Fibrosis: Association with Pulmonary Hypertension.

Seki A, Anklesaria Z, Saggar R, Dodson MW, Schwab K, Liu MC, Charan Ashana D, Miller WD, Vangala S, DerHovanessian A, Channick R, Shaikh F, Belperio JA, Weigt SS, Lynch JP, Ross DJ, Sullivan L, Khanna D, Shapiro SS, Sager J, Gargani L, Stanziola A, Bossone E, Schraufnagel DE, Fishbein G, Xu H, Fishbein MC, Wallace WD, Saggar R.

ACR Open Rheumatol. 2019 Mar 15;1(1):26-36. doi: 10.1002/acr2.1003. eCollection 2019 Mar.

9.

Genetic components of root architecture and anatomy adjustments to water-deficit stress in spring barley.

Oyiga BC, Palczak J, Wojciechowski T, Lynch JP, Naz AA, Léon J, Ballvora A.

Plant Cell Environ. 2019 Nov 16. doi: 10.1111/pce.13683. [Epub ahead of print]

PMID:
31734943
10.

Endotype-phenotyping may predict a treatment response in progressive fibrosing interstitial lung disease.

Hoffmann-Vold AM, Weigt SS, Saggar R, Palchevskiy V, Volkmann ER, Liang LL, Ross D, Ardehali A, Lynch JP 3rd, Belperio JA.

EBioMedicine. 2019 Dec;50:379-386. doi: 10.1016/j.ebiom.2019.10.050. Epub 2019 Nov 12.

11.

The contribution of age structure to the international homicide decline.

Rennó Santos M, Testa A, Porter LC, Lynch JP.

PLoS One. 2019 Oct 9;14(10):e0222996. doi: 10.1371/journal.pone.0222996. eCollection 2019.

12.

Root cortical anatomy is associated with differential pathogenic and symbiotic fungal colonization in maize.

Galindo-Castañeda T, Brown KM, Kuldau GA, Roth GW, Wenner NG, Ray S, Schneider H, Lynch JP.

Plant Cell Environ. 2019 Nov;42(11):2999-3014. doi: 10.1111/pce.13615. Epub 2019 Aug 12.

PMID:
31314912
13.

Genotypic variation and nitrogen stress effects on root anatomy in maize are node specific.

Yang JT, Schneider HM, Brown KM, Lynch JP.

J Exp Bot. 2019 Oct 15;70(19):5311-5325. doi: 10.1093/jxb/erz293.

14.

Laser ablation tomography for visualization of root colonization by edaphic organisms.

Strock CF, Schneider HM, Galindo-Castañeda T, Hall BT, Van Gansbeke B, Mather DE, Roth MG, Chilvers MI, Guo X, Brown K, Lynch JP.

J Exp Bot. 2019 Oct 15;70(19):5327-5342. doi: 10.1093/jxb/erz271.

15.

Pulmonary and Bronchiolar Involvement in Sjogren's Syndrome.

Chung A, Wilgus ML, Fishbein G, Lynch JP 3rd.

Semin Respir Crit Care Med. 2019 Apr;40(2):235-254. doi: 10.1055/s-0039-1688448. Epub 2019 May 28.

PMID:
31137063
16.

Increasing the Complexity of Organoid Cultures: Current Status and Future Challenges.

Lynch JP.

Cell Mol Gastroenterol Hepatol. 2019;8(1):155-156. doi: 10.1016/j.jcmgh.2019.04.005. Epub 2019 May 15. No abstract available.

17.

CCR4 expression on host T cells is a driver for alloreactive responses and lung rejection.

Palchevskiy V, Xue YY, Kern R, Weigt SS, Gregson AL, Song SX, Fishbein MC, Hogaboam CM, Sayah DM, Lynch JP 3rd, Keane MP, Brooks DG, Belperio JA.

JCI Insight. 2019 May 14;5. pii: 121782. doi: 10.1172/jci.insight.121782.

18.

KLF4 activates NFκB signaling and esophageal epithelial inflammation via the Rho-related GTP-binding protein RHOF.

Shaverdashvili K, Padlo J, Weinblatt D, Jia Y, Jiang W, Rao D, Laczkó D, Whelan KA, Lynch JP, Muir AB, Katz JP.

PLoS One. 2019 Apr 18;14(4):e0215746. doi: 10.1371/journal.pone.0215746. eCollection 2019.

19.

Analysis of the MILES cohort reveals determinants of disease progression and treatment response in lymphangioleiomyomatosis.

Gupta N, Lee HS, Young LR, Strange C, Moss J, Singer LG, Nakata K, Barker AF, Chapman JT, Brantly ML, Stocks JM, Brown KK, Lynch JP 3rd, Goldberg HJ, Downey GP, Taveira-DaSilva AM, Krischer JP, Setchell K, Trapnell BC, Inoue Y, McCormack FX; NIH Rare Lung Disease Consortium.

Eur Respir J. 2019 Apr 4;53(4). pii: 1802066. doi: 10.1183/13993003.02066-2018. Print 2019 Apr.

PMID:
30846465
20.

Organoids and Engineered Organ Systems.

Samuelson LC, Lynch JP.

Cell Mol Gastroenterol Hepatol. 2019;7(3):679-681. doi: 10.1016/j.jcmgh.2019.02.005. Epub 2019 Mar 2. No abstract available.

21.

Unintended consequences of changes to lung allocation policy.

Puri V, Hachem RR, Frye CC, Harrison MS, Semenkovich TR, Lynch JP, Ridolfi G, Rowe C, Meyers BF, Patterson GA, Kozower BD, Pasque MK, Nava RG, Marklin GF, Brockmeier D, Sweet SC, Chapman WC, Kreisel D.

Am J Transplant. 2019 Aug;19(8):2164-2167. doi: 10.1111/ajt.15307. Epub 2019 Mar 18.

PMID:
30758137
22.

Root phenotypes for improved nutrient capture: an underexploited opportunity for global agriculture.

Lynch JP.

New Phytol. 2019 Jul;223(2):548-564. doi: 10.1111/nph.15738. Epub 2019 Mar 21. Review.

PMID:
30746704
23.

Transbronchial Cryobiopsies.

Oh SS, Wallace WD, Shaikh F, Lynch JP 3rd.

Semin Respir Crit Care Med. 2018 Dec;39(6):637-648. doi: 10.1055/s-0038-1676645. Epub 2019 Jan 14. Review.

PMID:
30641581
24.

Augmented concentrations of CX3CL1 are associated with interstitial lung disease in systemic sclerosis.

Hoffmann-Vold AM, Weigt SS, Palchevskiy V, Volkmann E, Saggar R, Li N, Midtvedt Ø, Lund MB, Garen T, Fishbein MC, Ardehali A, Ross DJ, Ueland T, Aukrust P, Lynch JP 3rd, Elashoff RM, Molberg Ø, Belperio JA.

PLoS One. 2018 Nov 20;13(11):e0206545. doi: 10.1371/journal.pone.0206545. eCollection 2018.

25.

Granulomatosis with Polyangiitis (Wegener's Granulomatosis): Evolving Concepts in Treatment.

Lynch JP 3rd, Derhovanessian A, Tazelaar H, Belperio JA.

Semin Respir Crit Care Med. 2018 Aug;39(4):434-458. doi: 10.1055/s-0038-1660874. Epub 2018 Nov 7. Review.

PMID:
30404111
26.

Host-Pathogen Interactions: What the EHEC Are We Learning from Host Genome-Wide Screens?

Lynch JP, Lesser CF.

mBio. 2018 Oct 9;9(5). pii: e01837-18. doi: 10.1128/mBio.01837-18.

27.

Greater lateral root branching density in maize improves phosphorus acquisition from low phosphorus soil.

Jia X, Liu P, Lynch JP.

J Exp Bot. 2018 Sep 14;69(20):4961-4970. doi: 10.1093/jxb/ery252.

28.

The Xerobranching Response Represses Lateral Root Formation When Roots Are Not in Contact with Water.

Orman-Ligeza B, Morris EC, Parizot B, Lavigne T, Babé A, Ligeza A, Klein S, Sturrock C, Xuan W, Novák O, Ljung K, Fernandez MA, Rodriguez PL, Dodd IC, De Smet I, Chaumont F, Batoko H, Périlleux C, Lynch JP, Bennett MJ, Beeckman T, Draye X.

Curr Biol. 2018 Oct 8;28(19):3165-3173.e5. doi: 10.1016/j.cub.2018.07.074. Epub 2018 Sep 27.

29.

Maize Genomes to Fields: 2014 and 2015 field season genotype, phenotype, environment, and inbred ear image datasets.

AlKhalifah N, Campbell DA, Falcon CM, Gardiner JM, Miller ND, Romay MC, Walls R, Walton R, Yeh CT, Bohn M, Bubert J, Buckler ES, Ciampitti I, Flint-Garcia S, Gore MA, Graham C, Hirsch C, Holland JB, Hooker D, Kaeppler S, Knoll J, Lauter N, Lee EC, Lorenz A, Lynch JP, Moose SP, Murray SC, Nelson R, Rocheford T, Rodriguez O, Schnable JC, Scully B, Smith M, Springer N, Thomison P, Tuinstra M, Wisser RJ, Xu W, Ertl D, Schnable PS, De Leon N, Spalding EP, Edwards J, Lawrence-Dill CJ.

BMC Res Notes. 2018 Jul 9;11(1):452. doi: 10.1186/s13104-018-3508-1.

30.

Co-optimization of axial root phenotypes for nitrogen and phosphorus acquisition in common bean.

Rangarajan H, Postma JA, Lynch JP.

Ann Bot. 2018 Aug 27;122(3):485-499. doi: 10.1093/aob/mcy092.

31.

Ethylene modulates root cortical senescence in barley.

Schneider HM, Wojciechowski T, Postma JA, Brown KM, Lynch JP.

Ann Bot. 2018 Jun 28;122(1):95-105. doi: 10.1093/aob/mcy059.

32.

Correction to: Imipenem-Relebactam and Meropenem-Vaborbactam: Two Novel Carbapenem-β-Lactamase Inhibitor Combinations.

Zhanel GG, Lawrence CK, Adam H, Schweizer F, Zelenitsky S, Zhanel M, Lagacé-Wiens PRS, Walkty A, Denisuik A, Golden A, Gin AS, Hoban DJ, Lynch JP 3rd, Karlowsky JA.

Drugs. 2018 May;78(7):787. doi: 10.1007/s40265-018-0910-x.

PMID:
29748749
33.

PGD2/DP2 receptor activation promotes severe viral bronchiolitis by suppressing IFN-λ production.

Werder RB, Lynch JP, Simpson JC, Zhang V, Hodge NH, Poh M, Forbes-Blom E, Kulis C, Smythe ML, Upham JW, Spann K, Everard ML, Phipps S.

Sci Transl Med. 2018 May 9;10(440). pii: eaao0052. doi: 10.1126/scitranslmed.aao0052.

PMID:
29743346
34.

Author Correction: A mechanistic framework for auxin dependent Arabidopsis root hair elongation to low external phosphate.

Bhosale R, Giri J, Pandey BK, Giehl RFH, Hartmann A, Traini R, Truskina J, Leftley N, Hanlon M, Swarup K, Rashed A, Voß U, Alonso J, Stepanova A, Yun J, Ljung K, Brown KM, Lynch JP, Dolan L, Vernoux T, Bishopp A, Wells D, von Wirén N, Bennett MJ, Swarup R.

Nat Commun. 2018 May 2;9(1):1818. doi: 10.1038/s41467-018-04281-x.

35.

A mechanistic framework for auxin dependent Arabidopsis root hair elongation to low external phosphate.

Bhosale R, Giri J, Pandey BK, Giehl RFH, Hartmann A, Traini R, Truskina J, Leftley N, Hanlon M, Swarup K, Rashed A, Voß U, Alonso J, Stepanova A, Yun J, Ljung K, Brown KM, Lynch JP, Dolan L, Vernoux T, Bishopp A, Wells D, von Wirén N, Bennett MJ, Swarup R.

Nat Commun. 2018 Apr 12;9(1):1409. doi: 10.1038/s41467-018-03851-3. Erratum in: Nat Commun. 2018 May 2;9(1):1818.

36.

Large Crown Root Number Improves Topsoil Foraging and Phosphorus Acquisition.

Sun B, Gao Y, Lynch JP.

Plant Physiol. 2018 May;177(1):90-104. doi: 10.1104/pp.18.00234. Epub 2018 Apr 4.

37.

Fungal Infections Complicating Lung Transplantation.

Clark NM, Weigt SS, Fishbein MC, Kubak B, Belperio JA, Lynch JP 3rd.

Semin Respir Crit Care Med. 2018 Apr;39(2):227-254. doi: 10.1055/s-0037-1617443. Epub 2018 Mar 26. Review.

PMID:
29579774
38.

Chronic Lung Allograft Dysfunction: Evolving Concepts and Therapies.

DerHovanessian A, Wallace WD, Lynch JP 3rd, Belperio JA, Weigt SS.

Semin Respir Crit Care Med. 2018 Apr;39(2):155-171. doi: 10.1055/s-0037-1618567. Epub 2018 Mar 26. Review.

PMID:
29579768
39.

Reduced root cortical burden improves growth and grain yield under low phosphorus availability in maize.

Galindo-Castañeda T, Brown KM, Lynch JP.

Plant Cell Environ. 2018 Jul;41(7):1579-1592. doi: 10.1111/pce.13197. Epub 2018 May 16.

PMID:
29574982
40.

Pulmonary Allograft Versus Host Disease.

Dai DW, Garber B, Weigt SS, Worswick S, Kubak BM, Lynch JP 3rd, Shino MY, DerHovanessian A, Saggar R, Ross DJ, Sayah DM.

Transplant Direct. 2017 Nov 20;3(12):e333. doi: 10.1097/TXD.0000000000000749. eCollection 2017 Dec. No abstract available.

41.

Rightsizing root phenotypes for drought resistance.

Lynch JP.

J Exp Bot. 2018 Jun 6;69(13):3279-3292. doi: 10.1093/jxb/ery048. Review.

PMID:
29471525
42.

Buffered delivery of phosphate to Arabidopsis alters responses to low phosphate.

Hanlon MT, Ray S, Saengwilai P, Luthe D, Lynch JP, Brown KM.

J Exp Bot. 2018 Feb 23;69(5):1207-1219. doi: 10.1093/jxb/erx454.

43.

The Impact of Allograft CXCL9 during Respiratory Infection on the Risk of Chronic Lung Allograft Dysfunction.

Shino MY, DerHovanessian A, Sayah DM, Saggar R, Ying Xue Y, Ardehali A, Stripp BR, Ross DJ, Lynch JP 3rd, Elashoff RM, Weigt SS, Belperio JA.

OBM Transplant. 2018;2(4). pii: 029. doi: 10.21926/obm.transplant.1804029. Epub 2018 Nov 30.

44.

Plasmacytoid dendritic cells protect from viral bronchiolitis and asthma through semaphorin 4a-mediated T reg expansion.

Lynch JP, Werder RB, Loh Z, Sikder MAA, Curren B, Zhang V, Rogers MJ, Lane K, Simpson J, Mazzone SB, Spann K, Hayball J, Diener K, Everard ML, Blyth CC, Forstner C, Dennis PG, Murtaza N, Morrison M, Ó Cuív P, Zhang P, Haque A, Hill GR, Sly PD, Upham JW, Phipps S.

J Exp Med. 2018 Feb 5;215(2):537-557. doi: 10.1084/jem.20170298. Epub 2017 Dec 22.

45.

GUCY2C maintains intestinal LGR5+ stem cells by opposing ER stress.

Kraft CL, Rappaport JA, Snook AE, Pattison AM, Lynch JP, Waldman SA.

Oncotarget. 2017 Oct 26;8(61):102923-102933. doi: 10.18632/oncotarget.22084. eCollection 2017 Nov 28.

46.

Gene Expression Profiling of Bronchoalveolar Lavage Cells During Aspergillus Colonization of the Lung Allograft.

Weigt SS, Wang X, Palchevskiy V, Patel N, Derhovanessian A, Shino MY, Sayah DM, Lynch JP 3rd, Saggar R, Ross DJ, Kubak BM, Ardehali A, Palmer S, Husain S, Belperio JA.

Transplantation. 2018 Jun;102(6):986-993. doi: 10.1097/TP.0000000000002058.

47.

Imipenem-Relebactam and Meropenem-Vaborbactam: Two Novel Carbapenem-β-Lactamase Inhibitor Combinations.

Zhanel GG, Lawrence CK, Adam H, Schweizer F, Zelenitsky S, Zhanel M, Lagacé-Wiens PRS, Walkty A, Denisuik A, Golden A, Gin AS, Hoban DJ, Lynch JP 3rd, Karlowsky JA.

Drugs. 2018 Jan;78(1):65-98. doi: 10.1007/s40265-017-0851-9. Review. Erratum in: Drugs. 2018 May 10;:.

PMID:
29230684
48.

Critical Role of Plasmacytoid Dendritic Cells in Regulating Gene Expression and Innate Immune Responses to Human Rhinovirus-16.

Xi Y, Troy NM, Anderson D, Pena OM, Lynch JP, Phipps S, Bosco A, Upham JW.

Front Immunol. 2017 Oct 25;8:1351. doi: 10.3389/fimmu.2017.01351. eCollection 2017.

49.

Reduction in Root Secondary Growth as a Strategy for Phosphorus Acquisition.

Strock CF, Morrow de la Riva L, Lynch JP.

Plant Physiol. 2018 Jan;176(1):691-703. doi: 10.1104/pp.17.01583. Epub 2017 Nov 8.

50.

Pulmonary Hypertension Complicating Connective Tissue Disease.

Volkmann ER, Chung A, Saggar R, Belperio JA, Lynch JP 3rd.

Semin Respir Crit Care Med. 2017 Oct;38(5):619-635. doi: 10.1055/s-0037-1606203. Epub 2017 Oct 15. Review. No abstract available.

PMID:
29032565

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