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Items: 29

1.

Box C/D snoRNP Autoregulation by a cis-Acting snoRNA in the NOP56 Pre-mRNA.

Lykke-Andersen S, Ardal BK, Hollensen AK, Damgaard CK, Jensen TH.

Mol Cell. 2018 Oct 4;72(1):99-111.e5. doi: 10.1016/j.molcel.2018.08.017. Epub 2018 Sep 13.

PMID:
30220559
2.

Investigation of RNA Synthesis Using 5-Bromouridine Labelling and Immunoprecipitation.

Kofoed RH, Betzer C, Lykke-Andersen S, Molska E, Jensen PH.

J Vis Exp. 2018 May 3;(135). doi: 10.3791/57056.

PMID:
29782024
3.

Polo-like kinase 2 modulates α-synuclein protein levels by regulating its mRNA production.

Kofoed RH, Zheng J, Ferreira N, Lykke-Andersen S, Salvi M, Betzer C, Reimer L, Jensen TH, Fog K, Jensen PH.

Neurobiol Dis. 2017 Oct;106:49-62. doi: 10.1016/j.nbd.2017.06.014. Epub 2017 Jun 23.

PMID:
28648742
4.

Characterising cis-regulatory variation in the transcriptome of histologically normal and tumour-derived pancreatic tissues.

Zhang M, Lykke-Andersen S, Zhu B, Xiao W, Hoskins JW, Zhang X, Rost LM, Collins I, Bunt MV, Jia J, Parikh H, Zhang T, Song L, Jermusyk A, Chung CC, Zhu B, Zhou W, Matters GL, Kurtz RC, Yeager M, Jensen TH, Brown KM, Ongen H, Bamlet WR, Murray BA, McCarthy MI, Chanock SJ, Chatterjee N, Wolpin BM, Smith JP, Olson SH, Petersen GM, Shi J, Amundadottir L.

Gut. 2018 Mar;67(3):521-533. doi: 10.1136/gutjnl-2016-313146. Epub 2017 Jun 20.

5.

Structure of the RBM7-ZCCHC8 core of the NEXT complex reveals connections to splicing factors.

Falk S, Finogenova K, Melko M, Benda C, Lykke-Andersen S, Jensen TH, Conti E.

Nat Commun. 2016 Dec 1;7:13573. doi: 10.1038/ncomms13573.

6.

Identification of a Nuclear Exosome Decay Pathway for Processed Transcripts.

Meola N, Domanski M, Karadoulama E, Chen Y, Gentil C, Pultz D, Vitting-Seerup K, Lykke-Andersen S, Andersen JS, Sandelin A, Jensen TH.

Mol Cell. 2016 Nov 3;64(3):520-533. doi: 10.1016/j.molcel.2016.09.025. Epub 2016 Oct 27.

7.

The importance of a multi-disciplinary perspective and patient activation programmes in MS management.

Feys P, Giovannoni G, Dijsselbloem N, Centonze D, Eelen P, Lykke Andersen S.

Mult Scler. 2016 Aug;22(2 Suppl):34-46. doi: 10.1177/1352458516650741. Review.

PMID:
27465614
8.

Corrigendum: Human nonsense-mediated RNA decay initiates widely by endonucleolysis and targets snoRNA host genes.

Lykke-Andersen S, Chen Y, Ardal BR, Lilje B, Waage J, Sandelin A, Jensen TH.

Genes Dev. 2016 May 1;30(9):1128-34. doi: 10.1101/gad.281881.116. No abstract available.

9.

Relationships between PROMPT and gene expression.

Lloret-Llinares M, Mapendano CK, Martlev LH, Lykke-Andersen S, Jensen TH.

RNA Biol. 2016;13(1):6-14. doi: 10.1080/15476286.2015.1109769.

10.

Nonsense-mediated mRNA decay: an intricate machinery that shapes transcriptomes.

Lykke-Andersen S, Jensen TH.

Nat Rev Mol Cell Biol. 2015 Nov;16(11):665-77. doi: 10.1038/nrm4063. Epub 2015 Sep 23. Review.

PMID:
26397022
11.

Human nonsense-mediated RNA decay initiates widely by endonucleolysis and targets snoRNA host genes.

Lykke-Andersen S, Chen Y, Ardal BR, Lilje B, Waage J, Sandelin A, Jensen TH.

Genes Dev. 2014 Nov 15;28(22):2498-517. doi: 10.1101/gad.246538.114. Erratum in: Genes Dev. 2016 May 1;30(9):1128-34.

12.

Making ends meet: coordination between RNA 3'-end processing and transcription initiation.

Andersen PK, Jensen TH, Lykke-Andersen S.

Wiley Interdiscip Rev RNA. 2013 May-Jun;4(3):233-46. doi: 10.1002/wrna.1156. Epub 2013 Feb 28. Review.

PMID:
23450686
13.

Promoter-proximal polyadenylation sites reduce transcription activity.

Andersen PK, Lykke-Andersen S, Jensen TH.

Genes Dev. 2012 Oct 1;26(19):2169-79. doi: 10.1101/gad.189126.112.

14.

Interaction profiling identifies the human nuclear exosome targeting complex.

Lubas M, Christensen MS, Kristiansen MS, Domanski M, Falkenby LG, Lykke-Andersen S, Andersen JS, Dziembowski A, Jensen TH.

Mol Cell. 2011 Aug 19;43(4):624-37. doi: 10.1016/j.molcel.2011.06.028.

15.

An ending is a new beginning: transcription termination supports re-initiation.

Lykke-Andersen S, Mapendano CK, Jensen TH.

Cell Cycle. 2011 Mar 15;10(6):863-5. Epub 2011 Mar 15. No abstract available.

PMID:
21325895
16.

The eukaryotic RNA exosome: same scaffold but variable catalytic subunits.

Lykke-Andersen S, Tomecki R, Jensen TH, Dziembowski A.

RNA Biol. 2011 Jan-Feb;8(1):61-6. Epub 2011 Jan 1. Review.

PMID:
21289487
17.

Crosstalk between mRNA 3' end processing and transcription initiation.

Mapendano CK, Lykke-Andersen S, Kjems J, Bertrand E, Jensen TH.

Mol Cell. 2010 Nov 12;40(3):410-22. doi: 10.1016/j.molcel.2010.10.012.

18.

The human core exosome interacts with differentially localized processive RNases: hDIS3 and hDIS3L.

Tomecki R, Kristiansen MS, Lykke-Andersen S, Chlebowski A, Larsen KM, Szczesny RJ, Drazkowska K, Pastula A, Andersen JS, Stepien PP, Dziembowski A, Jensen TH.

EMBO J. 2010 Jul 21;29(14):2342-57. doi: 10.1038/emboj.2010.121. Epub 2010 Jun 8.

19.

Assembly of an export-competent mRNP is needed for efficient release of the 3'-end processing complex after polyadenylation.

Qu X, Lykke-Andersen S, Nasser T, Saguez C, Bertrand E, Jensen TH, Moore C.

Mol Cell Biol. 2009 Oct;29(19):5327-38. doi: 10.1128/MCB.00468-09. Epub 2009 Jul 27.

20.

Origins and activities of the eukaryotic exosome.

Lykke-Andersen S, Brodersen DE, Jensen TH.

J Cell Sci. 2009 May 15;122(Pt 10):1487-94. doi: 10.1242/jcs.047399. Review.

21.

SMG6 promotes endonucleolytic cleavage of nonsense mRNA in human cells.

Eberle AB, Lykke-Andersen S, Mühlemann O, Jensen TH.

Nat Struct Mol Biol. 2009 Jan;16(1):49-55. doi: 10.1038/nsmb.1530. Epub 2008 Dec 7.

PMID:
19060897
22.

RNA exosome depletion reveals transcription upstream of active human promoters.

Preker P, Nielsen J, Kammler S, Lykke-Andersen S, Christensen MS, Mapendano CK, Schierup MH, Jensen TH.

Science. 2008 Dec 19;322(5909):1851-4. doi: 10.1126/science.1164096. Epub 2008 Dec 4.

23.

The RNA exosome component hRrp6 is a target for 5-fluorouracil in human cells.

Kammler S, Lykke-Andersen S, Jensen TH.

Mol Cancer Res. 2008 Jun;6(6):990-5. doi: 10.1158/1541-7786.MCR-07-2217.

24.

A 5' splice site enhances the recruitment of basal transcription initiation factors in vivo.

Damgaard CK, Kahns S, Lykke-Andersen S, Nielsen AL, Jensen TH, Kjems J.

Mol Cell. 2008 Feb 1;29(2):271-8. doi: 10.1016/j.molcel.2007.11.035.

25.

Regulatory mechanisms for 3'-end alternative splicing and polyadenylation of the Glial Fibrillary Acidic Protein, GFAP, transcript.

Blechingberg J, Lykke-Andersen S, Jensen TH, Jørgensen AL, Nielsen AL.

Nucleic Acids Res. 2007;35(22):7636-50. Epub 2007 Nov 2.

26.

Alternative splicing of the ADAR1 transcript in a region that functions either as a 5'-UTR or an ORF.

Lykke-Andersen S, Piñol-Roma S, Kjems J.

RNA. 2007 Oct;13(10):1732-44. Epub 2007 Aug 13.

27.

Overlapping pathways dictate termination of RNA polymerase II transcription.

Lykke-Andersen S, Jensen TH.

Biochimie. 2007 Oct;89(10):1177-82. Epub 2007 Jun 2. Review.

PMID:
17629387
28.

CUT it out: silencing of noise in the transcriptome.

Lykke-Andersen S, Jensen TH.

Nat Struct Mol Biol. 2006 Oct;13(10):860-1. No abstract available.

PMID:
17021618
29.

Ratjadones inhibit nuclear export by blocking CRM1/exportin 1.

Köster M, Lykke-Andersen S, Elnakady YA, Gerth K, Washausen P, Höfle G, Sasse F, Kjems J, Hauser H.

Exp Cell Res. 2003 Jun 10;286(2):321-31.

PMID:
12749860

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