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Items: 6


AlleleAnalyzer: a tool for personalized and allele-specific sgRNA design.

Keough KC, Lyalina S, Olvera MP, Whalen S, Conklin BR, Pollard KS.

Genome Biol. 2019 Aug 15;20(1):167. doi: 10.1186/s13059-019-1783-3.


Development of Inflammatory Bowel Disease Is Linked to a Longitudinal Restructuring of the Gut Metagenome in Mice.

Sharpton T, Lyalina S, Luong J, Pham J, Deal EM, Armour C, Gaulke C, Sanjabi S, Pollard KS.

mSystems. 2017 Sep 5;2(5). pii: e00036-17. doi: 10.1128/mSystems.00036-17. eCollection 2017 Sep-Oct.


Topical silver diamine fluoride for dental caries arrest in preschool children: A randomized controlled trial and microbiological analysis of caries associated microbes and resistance gene expression.

Milgrom P, Horst JA, Ludwig S, Rothen M, Chaffee BW, Lyalina S, Pollard KS, DeRisi JL, Mancl L.

J Dent. 2018 Jan;68:72-78. doi: 10.1016/j.jdent.2017.08.015. Epub 2017 Sep 1.


Whole-Genome Sequencing of Drug-Resistant Salmonella enterica Isolates from Dairy Cattle and Humans in New York and Washington States Reveals Source and Geographic Associations.

Carroll LM, Wiedmann M, den Bakker H, Siler J, Warchocki S, Kent D, Lyalina S, Davis M, Sischo W, Besser T, Warnick LD, Pereira RV.

Appl Environ Microbiol. 2017 May 31;83(12). pii: e00140-17. doi: 10.1128/AEM.00140-17. Print 2017 Jun 15.


Exome sequencing in 32 patients with anophthalmia/microphthalmia and developmental eye defects.

Slavotinek AM, Garcia ST, Chandratillake G, Bardakjian T, Ullah E, Wu D, Umeda K, Lao R, Tang PL, Wan E, Madireddy L, Lyalina S, Mendelsohn BA, Dugan S, Tirch J, Tischler R, Harris J, Clark MJ, Chervitz S, Patwardhan A, West JM, Ursell P, de Alba Campomanes A, Schneider A, Kwok PY, Baranzini S, Chen RO.

Clin Genet. 2015 Nov;88(5):468-73. doi: 10.1111/cge.12543. Epub 2015 Jan 6.


Identifying phenotypic signatures of neuropsychiatric disorders from electronic medical records.

Lyalina S, Percha B, LePendu P, Iyer SV, Altman RB, Shah NH.

J Am Med Inform Assoc. 2013 Dec;20(e2):e297-305. doi: 10.1136/amiajnl-2013-001933. Epub 2013 Aug 16.

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