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Ethanol sensitizes skeletal muscle to ammonia-induced molecular perturbations.

Kant S, Davuluri G, Alchirazi KA, Welch N, Heit C, Kumar A, Gangadhariah M, Kim A, McMullen MR, Willard B, Luse DS, Nagy LE, Vasiliou V, Marini AM, Weiner ID, Dasarathy S.

J Biol Chem. 2019 May 3;294(18):7231-7244. doi: 10.1074/jbc.RA118.005411. Epub 2019 Mar 14.


Nucleotide Resolution Comparison of Transcription of Human Cytomegalovirus and Host Genomes Reveals Universal Use of RNA Polymerase II Elongation Control Driven by Dissimilar Core Promoter Elements.

Parida M, Nilson KA, Li M, Ball CB, Fuchs HA, Lawson CK, Luse DS, Meier JL, Price DH.

MBio. 2019 Feb 12;10(1). pii: e02047-18. doi: 10.1128/mBio.02047-18.


Nucleosomal Barrier to Transcription: Structural Determinants and Changes in Chromatin Structure.

Studitsky VM, Nizovtseva EV, Shaytan AK, Luse DS.

Biochem Mol Biol J. 2016;2(2). pii: 8. Epub 2016 May 30.


Gdown1 Associates Efficiently with RNA Polymerase II after Promoter Clearance and Displaces TFIIF during Transcript Elongation.

DeLaney E, Luse DS.

PLoS One. 2016 Oct 7;11(10):e0163649. doi: 10.1371/journal.pone.0163649. eCollection 2016.


THZ1 Reveals Roles for Cdk7 in Co-transcriptional Capping and Pausing.

Nilson KA, Guo J, Turek ME, Brogie JE, Delaney E, Luse DS, Price DH.

Mol Cell. 2015 Aug 20;59(4):576-87. doi: 10.1016/j.molcel.2015.06.032. Epub 2015 Aug 6.


Functional interactions of the RNA polymerase II-interacting proteins Gdown1 and TFIIF.

Mullen Davis MA, Guo J, Price DH, Luse DS.

J Biol Chem. 2014 Apr 18;289(16):11143-52. doi: 10.1074/jbc.M113.544395. Epub 2014 Mar 4.


The RNA polymerase II preinitiation complex. Through what pathway is the complex assembled?

Luse DS.

Transcription. 2014;5(1):e27050. doi: 10.4161/trns.27050. Review.


Promoter clearance by RNA polymerase II.

Luse DS.

Biochim Biophys Acta. 2013 Jan;1829(1):63-8. doi: 10.1016/j.bbagrm.2012.08.010. Epub 2012 Sep 6. Review.


Mechanism of transcription through a nucleosome by RNA polymerase II.

Kulaeva OI, Hsieh FK, Chang HW, Luse DS, Studitsky VM.

Biochim Biophys Acta. 2013 Jan;1829(1):76-83. doi: 10.1016/j.bbagrm.2012.08.015. Epub 2012 Sep 6. Review.


Rethinking the role of TFIIF in transcript initiation by RNA polymerase II.

Luse DS.

Transcription. 2012 Jul-Aug;3(4):156-9. doi: 10.4161/trns.20725. Epub 2012 Jul 1. Review.


Inactivated RNA polymerase II open complexes can be reactivated with TFIIE.

Čabart P, Luse DS.

J Biol Chem. 2012 Jan 6;287(2):961-7. doi: 10.1074/jbc.M111.297572. Epub 2011 Nov 27.


Transcription factor TFIIF is not required for initiation by RNA polymerase II, but it is essential to stabilize transcription factor TFIIB in early elongation complexes.

Čabart P, Újvári A, Pal M, Luse DS.

Proc Natl Acad Sci U S A. 2011 Sep 20;108(38):15786-91. doi: 10.1073/pnas.1104591108. Epub 2011 Sep 6.


The functions of TFIIF during initiation and transcript elongation are differentially affected by phosphorylation by casein kinase 2.

Újvári A, Pal M, Luse DS.

J Biol Chem. 2011 Jul 1;286(26):23160-7. doi: 10.1074/jbc.M110.205658. Epub 2011 May 12.


The mechanism of nucleosome traversal by RNA polymerase II: roles for template uncoiling and transcript elongation factors.

Luse DS, Studitsky VM.

RNA Biol. 2011 Jul-Aug;8(4):581-5. doi: 10.4161/rna.8.4.15389. Epub 2011 Jul 1.


Efficient and rapid nucleosome traversal by RNA polymerase II depends on a combination of transcript elongation factors.

Luse DS, Spangler LC, Újvári A.

J Biol Chem. 2011 Feb 25;286(8):6040-8. doi: 10.1074/jbc.M110.174722. Epub 2010 Dec 22.


Histone Sin mutations promote nucleosome traversal and histone displacement by RNA polymerase II.

Hsieh FK, Fisher M, Ujvári A, Studitsky VM, Luse DS.

EMBO Rep. 2010 Sep;11(9):705-10. doi: 10.1038/embor.2010.113. Epub 2010 Aug 13.


Histone N-terminal tails interfere with nucleosome traversal by RNA polymerase II.

Ujvári A, Hsieh FK, Luse SW, Studitsky VM, Luse DS.

J Biol Chem. 2008 Nov 21;283(47):32236-43. doi: 10.1074/jbc.M806636200. Epub 2008 Sep 23.


Nucleosomes can form a polar barrier to transcript elongation by RNA polymerase II.

Bondarenko VA, Steele LM, Ujvári A, Gaykalova DA, Kulaeva OI, Polikanov YS, Luse DS, Studitsky VM.

Mol Cell. 2006 Nov 3;24(3):469-79.


RNA emerging from the active site of RNA polymerase II interacts with the Rpb7 subunit.

Ujvári A, Luse DS.

Nat Struct Mol Biol. 2006 Jan;13(1):49-54. Epub 2005 Dec 4.


The role of the transcription bubble and TFIIB in promoter clearance by RNA polymerase II.

Pal M, Ponticelli AS, Luse DS.

Mol Cell. 2005 Jul 1;19(1):101-10.


Characterization of a novel RNA polymerase II arrest site which lacks a weak 3' RNA-DNA hybrid.

Hawryluk PJ, Ujvári A, Luse DS.

Nucleic Acids Res. 2004 Mar 26;32(6):1904-16. Print 2004.


RNA polymerase II transcription complexes may become arrested if the nascent RNA is shortened to less than 50 nucleotides.

Ujvári A, Pal M, Luse DS.

J Biol Chem. 2002 Sep 6;277(36):32527-37. Epub 2002 Jun 26.


The transition from initiation to elongation by RNA polymerase II.

Luse DS, Samkurashvili I.

Cold Spring Harb Symp Quant Biol. 1998;63:289-300. Review. No abstract available.


FACT, a factor that facilitates transcript elongation through nucleosomes.

Orphanides G, LeRoy G, Chang CH, Luse DS, Reinberg D.

Cell. 1998 Jan 9;92(1):105-16.


The H3/H4 tetramer blocks transcript elongation by RNA polymerase II in vitro.

Chang CH, Luse DS.

J Biol Chem. 1997 Sep 12;272(37):23427-34.


Translocation and transcriptional arrest during transcript elongation by RNA polymerase II.

Samkurashvili I, Luse DS.

J Biol Chem. 1996 Sep 20;271(38):23495-505.


The active site of RNA polymerase II participates in transcript cleavage within arrested ternary complexes.

Rudd MD, Izban MG, Luse DS.

Proc Natl Acad Sci U S A. 1994 Aug 16;91(17):8057-61.


cis-acting elements that confer lung epithelial cell expression of the CC10 gene.

Stripp BR, Sawaya PL, Luse DS, Wikenheiser KA, Wert SE, Huffman JA, Lattier DL, Singh G, Katyal SL, Whitsett JA.

J Biol Chem. 1992 Jul 25;267(21):14703-12.


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