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Items: 1 to 50 of 74

1.

Unusual effect of flow rate on retention in analytical supercritical fluid chromatography exemplified by polyethylene glycol separation.

Kostenko MO, Pokrovskiy OI, Zakhodyaeva YA, Voshkin AA, Lunin VV.

J Chromatogr A. 2020 Jan 11;1610:460513. doi: 10.1016/j.chroma.2019.460513. Epub 2019 Sep 4.

PMID:
31543338
2.

Target highlights in CASP13: Experimental target structures through the eyes of their authors.

Lepore R, Kryshtafovych A, Alahuhta M, Veraszto HA, Bomble YJ, Bufton JC, Bullock AN, Caba C, Cao H, Davies OR, Desfosses A, Dunne M, Fidelis K, Goulding CW, Gurusaran M, Gutsche I, Harding CJ, Hartmann MD, Hayes CS, Joachimiak A, Leiman PG, Loppnau P, Lovering AL, Lunin VV, Michalska K, Mir-Sanchis I, Mitra AK, Moult J, Phillips GN Jr, Pinkas DM, Rice PA, Tong Y, Topf M, Walton JD, Schwede T.

Proteins. 2019 Dec;87(12):1037-1057. doi: 10.1002/prot.25805. Epub 2019 Sep 9.

3.

Adsorption of water and n-hexane on pristine and oxidized carbon nanotube supports of cobalt-based Fischer-Tropsch catalysts.

Chernyak SA, Strokova NE, Fedorova ES, Ivanov AS, Maslakov KI, Savilov SV, Lunin VV.

Phys Chem Chem Phys. 2019 Jun 28;21(24):13234-13240. doi: 10.1039/c9cp01287g. Epub 2019 Jun 10.

PMID:
31180100
4.

Kinetics of chlorate formation during ozonation of aqueous chloride solutions.

Levanov AV, Isaikina OY, Gasanova RB, Uzhel AS, Lunin VV.

Chemosphere. 2019 Aug;229:68-76. doi: 10.1016/j.chemosphere.2019.04.105. Epub 2019 Apr 30.

PMID:
31075704
5.

Comparative Biochemical and Structural Analysis of Novel Cellulose Binding Proteins (Tāpirins) from Extremely Thermophilic Caldicellulosiruptor Species.

Lee LL, Hart WS, Lunin VV, Alahuhta M, Bomble YJ, Himmel ME, Blumer-Schuette SE, Adams MWW, Kelly RM.

Appl Environ Microbiol. 2019 Jan 23;85(3). pii: e01983-18. doi: 10.1128/AEM.01983-18. Print 2019 Feb 1.

6.

Kinetics of the defunctionalization of oxidized few-layer graphene nanoflakes.

Chernyak SA, Ivanov AS, Podgornova AM, Arkhipova EA, Kupreenko SY, Shumyantsev AV, Strokova NE, Maslakov KI, Savilov SV, Lunin VV.

Phys Chem Chem Phys. 2018 Oct 7;20(37):24117-24122. doi: 10.1039/c8cp05149f. Epub 2018 Sep 11.

PMID:
30204182
7.

An iterative computational design approach to increase the thermal endurance of a mesophilic enzyme.

Sammond DW, Kastelowitz N, Donohoe BS, Alahuhta M, Lunin VV, Chung D, Sarai NS, Yin H, Mittal A, Himmel ME, Guss AM, Bomble YJ.

Biotechnol Biofuels. 2018 Jul 9;11:189. doi: 10.1186/s13068-018-1178-9. eCollection 2018.

8.

3D Frameworks with Variable Magnetic and Electrical Features from Sintered Cobalt-Modified Carbon Nanotubes.

Savilov SV, Chernyak SA, Paslova MS, Ivanov AS, Egorova TB, Maslakov KI, Chernavskii PA, Lu L, Lunin VV.

ACS Appl Mater Interfaces. 2018 Jun 20;10(24):20983-20994. doi: 10.1021/acsami.8b04367. Epub 2018 Jun 8.

PMID:
29847909
9.

Dissociation Constants of Perchloric and Sulfuric Acids in Aqueous Solution.

Levanov AV, Isaikina OY, Gurbanova UD, Lunin VV.

J Phys Chem B. 2018 Jun 14;122(23):6277-6286. doi: 10.1021/acs.jpcb.8b01947. Epub 2018 Jun 1.

PMID:
29771520
10.

Engineering enhanced cellobiohydrolase activity.

Taylor LE 2nd, Knott BC, Baker JO, Alahuhta PM, Hobdey SE, Linger JG, Lunin VV, Amore A, Subramanian V, Podkaminer K, Xu Q, VanderWall TA, Schuster LA, Chaudhari YB, Adney WS, Crowley MF, Himmel ME, Decker SR, Beckham GT.

Nat Commun. 2018 Mar 22;9(1):1186. doi: 10.1038/s41467-018-03501-8.

11.

Natural diversity of glycoside hydrolase family 48 exoglucanases: insights from structure.

Brunecky R, Alahuhta M, Sammond DW, Xu Q, Chen M, Wilson DB, Brady JW, Himmel ME, Bomble YJ, Lunin VV.

Biotechnol Biofuels. 2017 Nov 30;10:274. doi: 10.1186/s13068-017-0951-5. eCollection 2017.

12.

Structure of a Thermobifida fusca lytic polysaccharide monooxygenase and mutagenesis of key residues.

Kruer-Zerhusen N, Alahuhta M, Lunin VV, Himmel ME, Bomble YJ, Wilson DB.

Biotechnol Biofuels. 2017 Nov 30;10:243. doi: 10.1186/s13068-017-0925-7. eCollection 2017.

13.

Structural, mutagenic and in silico studies of xyloglucan fucosylation in Arabidopsis thaliana suggest a water-mediated mechanism.

Urbanowicz BR, Bharadwaj VS, Alahuhta M, Peña MJ, Lunin VV, Bomble YJ, Wang S, Yang JY, Tuomivaara ST, Himmel ME, Moremen KW, York WS, Crowley MF.

Plant J. 2017 Sep;91(6):931-949. doi: 10.1111/tpj.13628. Epub 2017 Aug 28.

14.

Towards an Understanding of Enhanced Biomass Digestibility by In Planta Expression of a Family 5 Glycoside Hydrolase.

Donohoe BS, Wei H, Mittal A, Shollenberger T, Lunin VV, Himmel ME, Brunecky R.

Sci Rep. 2017 Jun 29;7(1):4389. doi: 10.1038/s41598-017-04502-1.

15.

The role of laser power and pullback velocity in the endovenous laser ablation efficacy: an experimental study.

Ignatieva NY, Zakharkina OL, Masayshvili CV, Maximov SV, Bagratashvili VN, Lunin VV.

Lasers Med Sci. 2017 Jul;32(5):1105-1110. doi: 10.1007/s10103-017-2214-x. Epub 2017 May 2.

PMID:
28466194
16.

The enthalpies of formation of carbon nanomaterials as a key factor for understanding their structural features.

Suslova EV, Savilov SV, Ni J, Lunin VV, Aldoshin SM.

Phys Chem Chem Phys. 2017 Jan 18;19(3):2269-2275. doi: 10.1039/c6cp07570c.

PMID:
28054689
17.

Oxidation, defunctionalization and catalyst life cycle of carbon nanotubes: a Raman spectroscopy view.

Chernyak SA, Ivanov AS, Maslakov KI, Egorov AV, Shen Z, Savilov SS, Lunin VV.

Phys Chem Chem Phys. 2017 Jan 18;19(3):2276-2285. doi: 10.1039/c6cp04657f.

PMID:
28054674
18.

A case of Z/E-isomers elution order inversion caused by cosolvent percentage change in supercritical fluid chromatography.

Pokrovskiy OI, Ustinovich KB, Usovich OI, Parenago OO, Lunin VV, Ovchinnikov DV, Kosyakov DS.

J Chromatogr A. 2017 Jan 6;1479:177-184. doi: 10.1016/j.chroma.2016.11.037. Epub 2016 Nov 21.

PMID:
27916392
19.

Effect of anisotropy and drying of costal cartilage on its optical transmittance in laser reshaping of implants with 1, 2, and 3 mm in thickness.

Soshnikova YM, Keselman MM, Baum OI, Shults EV, Obrezkova MV, Lunin VV, Sobol EN.

Lasers Surg Med. 2016 Nov;48(9):887-892. doi: 10.1002/lsm.22575. Epub 2016 Aug 22.

PMID:
27546712
20.

Strategies to reduce end-product inhibition in family 48 glycoside hydrolases.

Chen M, Bu L, Alahuhta M, Brunecky R, Xu Q, Lunin VV, Brady JW, Crowley MF, Himmel ME, Bomble YJ.

Proteins. 2016 Mar;84(3):295-304. doi: 10.1002/prot.24965. Epub 2016 Feb 1.

PMID:
26572060
21.

Crystal structure and biochemical characterization of Chlamydomonas FDX2 reveal two residues that, when mutated, partially confer FDX2 the redox potential and catalytic properties of FDX1.

Boehm M, Alahuhta M, Mulder DW, Peden EA, Long H, Brunecky R, Lunin VV, King PW, Ghirardi ML, Dubini A.

Photosynth Res. 2016 Apr;128(1):45-57. doi: 10.1007/s11120-015-0198-6. Epub 2015 Nov 3.

22.

[Clinical and epidemiological characteristics of acute myeloid leukemias in adults according to the data of municipal hematology departments in Moscow].

Semochkin SV, Tolstykh TN, Arkhipova NV, Ivanova VL, Klyueva OV, Lunin VV, Misyurina EN, Tumanova MV, Khuazheva NK.

Ter Arkh. 2015;87(7):26-32. doi: 10.17116/terarkh201587726-32. Russian.

PMID:
26390722
23.

[Antioxidant Effect on the Growth And Formation of Lipids in the Fungus Lentinus tigrinus Growing on Medium with Lignosulfonate].

Ivashechkin AA, Sergeeva JE, Lunin VV, Mysyakina JS, Feofilova EP.

Prikl Biokhim Mikrobiol. 2015 May-Jun;51(3):335-9. Russian.

PMID:
26204778
24.

Photochemical oxidation of chloride ion by ozone in acid aqueous solution.

Levanov AV, Isaykina OY, Amirova NK, Antipenko EE, Lunin VV.

Environ Sci Pollut Res Int. 2015 Nov;22(21):16554-69. doi: 10.1007/s11356-015-4832-9. Epub 2015 Jun 17.

PMID:
26077317
25.

[Influence of lignin and oxygen on the growth and the lipid formation of the fungus Lentinus tigrinus].

IIvashechkin AA, Sergeeva IaÉ, Lunin VV, Bogdan VI, Mysiakina IS, Feofilova EP.

Prikl Biokhim Mikrobiol. 2014 May-Jun;50(3):318-23. Russian.

PMID:
25757341
26.

Discrete and structurally unique proteins (tāpirins) mediate attachment of extremely thermophilic Caldicellulosiruptor species to cellulose.

Blumer-Schuette SE, Alahuhta M, Conway JM, Lee LL, Zurawski JV, Giannone RJ, Hettich RL, Lunin VV, Himmel ME, Kelly RM.

J Biol Chem. 2015 Apr 24;290(17):10645-56. doi: 10.1074/jbc.M115.641480. Epub 2015 Feb 26.

27.

Laser radiation effect on chondrocytes and intercellular matrix of costal and articular cartilage impregnated with magnetite nanoparticles.

Soshnikova YM, Shekhter AB, Baum OI, Shcherbakov EM, Omelchenko AI, Lunin VV, Sobol EN.

Lasers Surg Med. 2015 Mar;47(3):243-51. doi: 10.1002/lsm.22331. Epub 2015 Feb 17.

PMID:
25689939
28.

Response to Comment on "Revealing nature's cellulase diversity: the digestion mechanism of Caldicellulosiruptor bescii CelA".

Brunecky R, Alahuhta M, Xu Q, Donohoe BS, Crowley MF, Kataeva IA, Yang SJ, Resch MG, Adams MW, Lunin VV, Himmel ME, Bomble YJ.

Science. 2014 May 9;344(6184):578. doi: 10.1126/science.1251701.

29.

Ex vivo laser thermoplasty of whole costal cartilages.

Sviridov AP, Zakharkina OL, Ignatieva NY, Vorobieva NN, Bagratashvili NV, Plyakin VA, Kulik IO, Sarukhanyan OO, Minaev VP, Lunin VV, Bagratashvili VN.

Lasers Surg Med. 2014 Apr;46(4):302-9. doi: 10.1002/lsm.22233. Epub 2014 Feb 24.

PMID:
24615756
30.

Revealing nature's cellulase diversity: the digestion mechanism of Caldicellulosiruptor bescii CelA.

Brunecky R, Alahuhta M, Xu Q, Donohoe BS, Crowley MF, Kataeva IA, Yang SJ, Resch MG, Adams MW, Lunin VV, Himmel ME, Bomble YJ.

Science. 2013 Dec 20;342(6165):1513-6. doi: 10.1126/science.1244273.

PMID:
24357319
31.

Formation of hydrogen polyoxides as constituents of peroxy radical condensate upon low-temperature interaction of hydrogen atoms with liquid ozone.

Levanov AV, Isaykina OY, Antipenko EE, Lunin VV.

J Phys Chem A. 2014 Jan 9;118(1):62-9. doi: 10.1021/jp410938b. Epub 2013 Dec 23.

PMID:
24325583
32.

Structure of Acidothermus cellulolyticus family 74 glycoside hydrolase at 1.82 Å resolution.

Alahuhta M, Adney WS, Himmel ME, Lunin VV.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Dec;69(Pt 12):1335-8. doi: 10.1107/S1744309113030005. Epub 2013 Nov 28.

33.

Cel48A from Thermobifida fusca: structure and site directed mutagenesis of key residues.

Kostylev M, Alahuhta M, Chen M, Brunecky R, Himmel ME, Lunin VV, Brady J, Wilson DB.

Biotechnol Bioeng. 2014 Apr;111(4):664-73. doi: 10.1002/bit.25139. Epub 2013 Nov 21.

PMID:
24264519
34.

[Biodiesel fuel production from lipids of filamentous fungi].

Lunin VV, Sergeev IaÉ, Galanina LA, Mysiakina IS, Ivashechkin AA, Bogdan VI, Feofilova EP.

Prikl Biokhim Mikrobiol. 2013 Jan-Feb;49(1):53-60. Russian.

PMID:
23662451
35.

The structure and mode of action of Caldicellulosiruptor bescii family 3 pectate lyase in biomass deconstruction.

Alahuhta M, Brunecky R, Chandrayan P, Kataeva I, Adams MW, Himmel ME, Lunin VV.

Acta Crystallogr D Biol Crystallogr. 2013 Apr;69(Pt 4):534-9. doi: 10.1107/S0907444912050512. Epub 2013 Mar 9.

PMID:
23519661
36.

Sequence, structure, and evolution of cellulases in glycoside hydrolase family 48.

Sukharnikov LO, Alahuhta M, Brunecky R, Upadhyay A, Himmel ME, Lunin VV, Zhulin IB.

J Biol Chem. 2012 Nov 30;287(49):41068-77. doi: 10.1074/jbc.M112.405720. Epub 2012 Oct 10.

37.

Two subsystems of meniscal collagen and their different thermal stabilities.

Ignatieva NY, Zakharkina OL, Lunin VV, Baratova LA, Grokhovskaya TE, Balalaeva IV, Sergeeva EA.

Dokl Biochem Biophys. 2012 May-Jun;444:175-7. doi: 10.1134/S1607672912030143. Epub 2012 Jul 8. No abstract available.

PMID:
22773005
38.

Structure and function of the Clostridium thermocellum cellobiohydrolase A X1-module repeat: enhancement through stabilization of the CbhA complex.

Brunecky R, Alahuhta M, Bomble YJ, Xu Q, Baker JO, Ding SY, Himmel ME, Lunin VV.

Acta Crystallogr D Biol Crystallogr. 2012 Mar;68(Pt 3):292-9. doi: 10.1107/S0907444912001680. Epub 2012 Feb 14.

PMID:
22349231
39.

Determination of uptake coefficient for ClO radicals on the surface of mineral salts.

Vasiliev ES, Loukhovitskaya EE, Morozov II, Savilov SV, Lunin VV.

J Phys Chem A. 2012 Jun 21;116(24):6107-12. doi: 10.1021/jp211357y. Epub 2012 Feb 15.

PMID:
22284164
40.

A 1.5 Å resolution X-ray structure of the catalytic module of Caldicellulosiruptor bescii family 3 pectate lyase.

Alahuhta M, Chandrayan P, Kataeva I, Adams MW, Himmel ME, Lunin VV.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Dec 1;67(Pt 12):1498-500. doi: 10.1107/S1744309111038449. Epub 2011 Nov 25.

41.

The Cryptosporidium parvum kinome.

Artz JD, Wernimont AK, Allali-Hassani A, Zhao Y, Amani M, Lin YH, Senisterra G, Wasney GA, Fedorov O, King O, Roos A, Lunin VV, Qiu W, Finerty P Jr, Hutchinson A, Chau I, von Delft F, MacKenzie F, Lew J, Kozieradzki I, Vedadi M, Schapira M, Zhang C, Shokat K, Heightman T, Hui R.

BMC Genomics. 2011 Sep 30;12:478. doi: 10.1186/1471-2164-12-478.

42.

A specific inorganic triphosphatase from Nitrosomonas europaea: structure and catalytic mechanism.

Delvaux D, Murty MR, Gabelica V, Lakaye B, Lunin VV, Skarina T, Onopriyenko O, Kohn G, Wins P, De Pauw E, Bettendorff L.

J Biol Chem. 2011 Sep 30;286(39):34023-35. doi: 10.1074/jbc.M111.233585. Epub 2011 Aug 12.

43.

Laser reshaping of costal cartilage for transplantation.

Baum OI, Soshnikova YM, Sobol EN, Korneychuk AY, Obrezkova MV, Svistushkin VM, Timofeeva OK, Lunin VV.

Lasers Surg Med. 2011 Aug;43(6):511-5. doi: 10.1002/lsm.21077.

PMID:
21761421
44.

Structure of CBM4 from Clostridium thermocellum cellulase K.

Alahuhta M, Luo Y, Ding SY, Himmel ME, Lunin VV.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 May 1;67(Pt 5):527-30. doi: 10.1107/S1744309111003307. Epub 2011 Apr 20.

45.

Effect of Omnipaque on the optical properties and laser-induced changes in the thermostability of nucleus pulposus of the intervertebral disk.

Baum OI, Omel'chenko AI, Ryzhkov IO, Obrezkova MV, Lunin VV, Sobol EN.

Dokl Biochem Biophys. 2009 Sep-Oct;428:261-3. No abstract available.

PMID:
20848914
46.

Structure of a fibronectin type III-like module from Clostridium thermocellum.

Alahuhta M, Xu Q, Brunecky R, Adney WS, Ding SY, Himmel ME, Lunin VV.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Aug 1;66(Pt 8):878-80. doi: 10.1107/S1744309110022529. Epub 2010 Jul 27.

47.

The unique binding mode of cellulosomal CBM4 from Clostridium thermocellum cellobiohydrolase A.

Alahuhta M, Xu Q, Bomble YJ, Brunecky R, Adney WS, Ding SY, Himmel ME, Lunin VV.

J Mol Biol. 2010 Sep 17;402(2):374-87. doi: 10.1016/j.jmb.2010.07.028. Epub 2010 Jul 21.

PMID:
20654622
48.

Structural biology of human H3K9 methyltransferases.

Wu H, Min J, Lunin VV, Antoshenko T, Dombrovski L, Zeng H, Allali-Hassani A, Campagna-Slater V, Vedadi M, Arrowsmith CH, Plotnikov AN, Schapira M.

PLoS One. 2010 Jan 11;5(1):e8570. doi: 10.1371/journal.pone.0008570.

49.

The long-chain fatty acid sensor, PsrA, modulates the expression of rpoS and the type III secretion exsCEBA operon in Pseudomonas aeruginosa.

Kang Y, Lunin VV, Skarina T, Savchenko A, Schurr MJ, Hoang TT.

Mol Microbiol. 2009 Jul;73(1):120-36. doi: 10.1111/j.1365-2958.2009.06757.x. Epub 2009 Jun 8.

50.

Structural and biochemical characterization of the type II fructose-1,6-bisphosphatase GlpX from Escherichia coli.

Brown G, Singer A, Lunin VV, Proudfoot M, Skarina T, Flick R, Kochinyan S, Sanishvili R, Joachimiak A, Edwards AM, Savchenko A, Yakunin AF.

J Biol Chem. 2009 Feb 6;284(6):3784-92. doi: 10.1074/jbc.M808186200. Epub 2008 Dec 10.

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