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Items: 1 to 50 of 74

1.

Genome sequences of parvovirus b19 reference strains.

Trösemeier JH, Branting A, Lukashov VV, Blümel J, Baylis SA.

Genome Announc. 2014 Oct 9;2(5). pii: e00830-14. doi: 10.1128/genomeA.00830-14.

2.

[HIV-1 genetic variants in the Asian part of Russia: a study (2005-2010)].

Kazennova EV, Vasil'ev AV, Lapovok IA, Grishechkin AE, Laga VIu, Salamov GG, Tumanov AS, Parygina OA, Ruzaeva LA, Grezina LA, Serkina TP, Kaufman OA, Oorzhak ND, Lukashov VV, Bobkova MR.

Vopr Virusol. 2013 Jul-Aug;58(4):28-35. Russian.

PMID:
24354062
3.

Cell-associated HIV RNA: a dynamic biomarker of viral persistence.

Pasternak AO, Lukashov VV, Berkhout B.

Retrovirology. 2013 Apr 15;10:41. doi: 10.1186/1742-4690-10-41. Review.

4.

Distinct HIV type 1 strains in different risk groups and the absence of new infections by drug-resistant strains in Lithuania.

Caplinskas S, Loukachov VV, Gasich EL, Gilyazova AV, Caplinskiene I, Lukashov VV.

AIDS Res Hum Retroviruses. 2013 Apr;29(4):732-7. doi: 10.1089/AID.2012.0312. Epub 2013 Feb 1.

5.

Transmission of risk-group specific HIV-1 strains among Dutch drug users for more than 20 years and their replacement by nonspecific strains after switching to low-harm drug practices.

Lukashov VV, Jurriaans S, Bakker M, Berkhout B.

J Acquir Immune Defic Syndr. 2013 Feb 1;62(2):234-8. doi: 10.1097/QAI.0b013e318279734d.

PMID:
23117501
6.

Modest nonadherence to antiretroviral therapy promotes residual HIV-1 replication in the absence of virological rebound in plasma.

Pasternak AO, de Bruin M, Jurriaans S, Bakker M, Berkhout B, Prins JM, Lukashov VV.

J Infect Dis. 2012 Nov;206(9):1443-52. doi: 10.1093/infdis/jis502. Epub 2012 Aug 20.

PMID:
22927449
7.

Global co-existence of two evolutionary lineages of parvovirus B19 1a, different in genome-wide synonymous positions.

Molenaar-de Backer MW, Lukashov VV, van Binnendijk RS, Boot HJ, Zaaijer HL.

PLoS One. 2012;7(8):e43206. doi: 10.1371/journal.pone.0043206. Epub 2012 Aug 13.

8.

Protein X of hepatitis B virus: origin and structure similarity with the central domain of DNA glycosylase.

van Hemert FJ, van de Klundert MA, Lukashov VV, Kootstra NA, Berkhout B, Zaaijer HL.

PLoS One. 2011;6(8):e23392. doi: 10.1371/journal.pone.0023392. Epub 2011 Aug 5.

9.

[Molecular epidemiology of HIV-1 strains in the Moscow Region].

Giliazova AV, Zenin PV, Pronin AIu, Serkov IL, Khametova KM, Orlova-Morozova EA, Zhukova EV, Kornilaeva GV, Pasternak AO, Lukashov VV, Karamov EV.

Vopr Virusol. 2010 Sep-Oct;55(5):25-9. Russian.

PMID:
21260992
10.

Steady increase in cellular HIV-1 load during the asymptomatic phase of untreated infection despite stable plasma viremia.

Pasternak AO, Jurriaans S, Bakker M, Berkhout B, Lukashov VV.

AIDS. 2010 Jul 17;24(11):1641-9. doi: 10.1097/QAD.0b013e32833b3171.

PMID:
20543660
11.

Cellular levels of HIV unspliced RNA from patients on combination antiretroviral therapy with undetectable plasma viremia predict the therapy outcome.

Pasternak AO, Jurriaans S, Bakker M, Prins JM, Berkhout B, Lukashov VV.

PLoS One. 2009 Dec 31;4(12):e8490. doi: 10.1371/journal.pone.0008490.

12.

Transmission networks of HIV-1 among men having sex with men in the Netherlands.

Bezemer D, van Sighem A, Lukashov VV, van der Hoek L, Back N, Schuurman R, Boucher CA, Claas EC, Boerlijst MC, Coutinho RA, de Wolf F; ATHENA observational cohort.

AIDS. 2010 Jan 16;24(2):271-82. doi: 10.1097/QAD.0b013e328333ddee.

PMID:
20010072
13.

Epidemiological networks and drug resistance of HIV type 1 in Krasnoyarsk region, Russia.

Rumyantseva OA, Olkhovskiy IA, Malysheva MA, Ruzaeva LA, Vasiliev AV, Kazennova EV, Bobkova MR, Lukashov VV.

AIDS Res Hum Retroviruses. 2009 Sep;25(9):931-6. doi: 10.1089/aid.2009.0075.

PMID:
19689192
14.

Occult hepatitis B infection: an evolutionary scenario.

van Hemert FJ, Zaaijer HL, Berkhout B, Lukashov VV.

Virol J. 2008 Dec 11;5:146. doi: 10.1186/1743-422X-5-146.

15.

Highly sensitive methods based on seminested real-time reverse transcription-PCR for quantitation of human immunodeficiency virus type 1 unspliced and multiply spliced RNA and proviral DNA.

Pasternak AO, Adema KW, Bakker M, Jurriaans S, Berkhout B, Cornelissen M, Lukashov VV.

J Clin Microbiol. 2008 Jul;46(7):2206-11. doi: 10.1128/JCM.00055-08. Epub 2008 May 7.

16.

Combination antiretroviral therapy failure and HIV super-infection.

Bezemer D, van Sighem A, de Wolf F, Cornelissen M, van der Kuyl AC, Jurriaans S, van der Hoek L, Prins M, Coutinho RA, Lukashov VV.

AIDS. 2008 Jan 11;22(2):309-11.

PMID:
18097235
17.

Mosaic amino acid conservation in 3D-structures of surface protein and polymerase of hepatitis B virus.

van Hemert FJ, Zaaijer HL, Berkhout B, Lukashov VV.

Virology. 2008 Jan 20;370(2):362-72. Epub 2007 Nov 1.

18.

Analysis of two human parvovirus PARV4 genotypes identified in human plasma for fractionation.

Fryer JF, Delwart E, Bernardin F, Tuke PW, Lukashov VV, Baylis SA.

J Gen Virol. 2007 Aug;88(Pt 8):2162-7.

PMID:
17622618
19.

Independent evolution of overlapping polymerase and surface protein genes of hepatitis B virus.

Zaaijer HL, van Hemert FJ, Koppelman MH, Lukashov VV.

J Gen Virol. 2007 Aug;88(Pt 8):2137-43.

PMID:
17622615
20.

Discovery of a novel human picornavirus in a stool sample from a pediatric patient presenting with fever of unknown origin.

Jones MS, Lukashov VV, Ganac RD, Schnurr DP.

J Clin Microbiol. 2007 Jul;45(7):2144-50. Epub 2007 Apr 25.

21.

Characterization of an HIV-1 group M variant that is distinct from the known subtypes.

van der Hoek L, Pollakis G, Lukashov VV, Jebbink MF, Jeeninga RE, Bakker M, Dukers N, Jurriaans S, Paxton WA, Back NK, Berkhout B.

AIDS Res Hum Retroviruses. 2007 Mar;23(3):466-70.

PMID:
17411380
22.
23.

The rate of epidemiological and virological changes during the transition from nascent to concentrated HIV epidemic stage in the former Soviet Union countries.

Nabatov AA, Masharsky AE, Verevochkin SV, Emelyanov AV, Lukashov VV, Heimer R, Ryder RW, Goudsmit J, Kozlov AP.

AIDS Res Hum Retroviruses. 2007 Feb;23(2):183-92.

PMID:
17331025
24.

[The molecular epidemiology of HIV-1 in Belarus in (1996-2004): a predominance of subtype A variants and circulation of subtype B variants].

Lukashov VV, Lazovskaia NV, Karamov EV, Adema KW, Gasich EL, Baan E, Titov LP, Goudsmit J, Eremin VF.

Vopr Virusol. 2006 Nov-Dec;51(6):22-6. Russian.

PMID:
17214078
25.

Host-related nucleotide composition and codon usage as driving forces in the recent evolution of the Astroviridae.

van Hemert FJ, Berkhout B, Lukashov VV.

Virology. 2007 May 10;361(2):447-54. Epub 2006 Dec 22.

26.

Identification, phenotypic analysis, and full-length nucleotide sequence of a Dutch Coxsackievirus A20 isolate.

Boot HJ, Lukashov VV, van Remmerden Y, Kimman TG.

Virus Genes. 2007 Jan;34(1):75-85. Epub 2006 Sep 9.

PMID:
16964555
27.

The HIV type 1 epidemic in Belarus: predominance of Eastern European subtype A strains and circulation of subtype B viruses.

Lazouskaya NV, Eremin VF, Adema KW, Gasich EL, Baan E, Lukashov VV.

AIDS Res Hum Retroviruses. 2005 Sep;21(9):830-3.

PMID:
16218809
28.

New DNA viruses identified in patients with acute viral infection syndrome.

Jones MS, Kapoor A, Lukashov VV, Simmonds P, Hecht F, Delwart E.

J Virol. 2005 Jul;79(13):8230-6.

29.
30.

Identification of sequential viral escape mutants associated with altered T-cell responses in a human immunodeficiency virus type 1-infected individual.

Geels MJ, Cornelissen M, Schuitemaker H, Anderson K, Kwa D, Maas J, Dekker JT, Baan E, Zorgdrager F, van den Burg R, van Beelen M, Lukashov VV, Fu TM, Paxton WA, van der Hoek L, Dubey SA, Shiver JW, Goudsmit J.

J Virol. 2003 Dec;77(23):12430-40.

31.

Simultaneous introduction of HIV type 1 subtype A and B viruses into injecting drug users in southern Ukraine at the beginning of the epidemic in the former Soviet Union.

Nabatov AA, Kravchenko ON, Lyulchuk MG, Shcherbinskaya AM, Lukashov VV.

AIDS Res Hum Retroviruses. 2002 Aug 10;18(12):891-5.

PMID:
12201913
32.

Evolutionary relationships among Astroviridae.

Lukashov VV, Goudsmit J.

J Gen Virol. 2002 Jun;83(Pt 6):1397-405.

PMID:
12029155
34.

Codon and amino acid usage in retroviral genomes is consistent with virus-specific nucleotide pressure.

Berkhout B, Grigoriev A, Bakker M, Lukashov VV.

AIDS Res Hum Retroviruses. 2002 Jan 20;18(2):133-41.

PMID:
11839146
35.

The impact of immigration on env HIV-1 subtype distribution among heterosexuals in the Netherlands: influx of subtype B and non-B strains.

Op de Coul EL, Coutinho RA, van der Schoot A, van Doornum GJ, Lukashov VV, Goudsmit J, Cornelissen M; Dutch HIV-1 Subtype Surveillance.

AIDS. 2001 Nov 23;15(17):2277-86.

PMID:
11698701
36.

Timing of the HIV-1 subtype C epidemic in Ethiopia based on early virus strains and subsequent virus diversification.

Abebe A, Lukashov VV, Pollakis G, Kliphuis A, Fontanet AL, Goudsmit J, de Wit TF.

AIDS. 2001 Aug 17;15(12):1555-61.

PMID:
11504988
37.

Selection by AZT and rapid replacement in the absence of drugs of HIV type 1 resistant to multiple nucleoside analogs.

Lukashov VV, Huismans R, Jebbink MF, Danner SA, de Boer RJ, Goudsmit J.

AIDS Res Hum Retroviruses. 2001 Jun 10;17(9):807-18.

PMID:
11429122
38.

Timing of the introduction into Ethiopia of subcluster C' of HIV type 1 subtype C.

Abebe A, Lukashov VV, Rinke De Wit TF, Fisseha B, Tegbaru B, Kliphuis A, Tesfaye G, Negassa H, Fontanet AL, Goudsmit J, Pollakis G.

AIDS Res Hum Retroviruses. 2001 May 1;17(7):657-61.

PMID:
11375063
40.

Using phylogenetic analysis to trace HIV-1 migration among western European injecting drug users seroconverting from 1984 to 1997.

Op de Coul EL, Prins M, Cornelissen M, van der Schoot A, Boufassa F, Brettle RP, Hernández-Aguado L, Schiffer V, McMenamin J, Rezza G, Robertson R, Zangerle R, Goudsmit J, Coutinho RA, Lukashov VV; European and Italian Seroconverter Studies.

AIDS. 2001 Jan 26;15(2):257-66.

PMID:
11216936
41.
42.

Epidemiology of HIV-1 and emerging problems.

Lukashov VV, de Ronde A, de Jong JJ, Goudsmit J.

Int J Antimicrob Agents. 2000 Dec;16(4):463-6.

PMID:
11118859
43.

Subtype-specific sequence variation of the HIV type 1 long terminal repeat and primer-binding site.

De Baar MP, De Ronde A, Berkhout B, Cornelissen M, Van Der Horn KH, Van Der Schoot AM, De Wolf F, Lukashov VV, Goudsmit J.

AIDS Res Hum Retroviruses. 2000 Mar 20;16(5):499-504.

PMID:
10772536
44.

Silent mutation in the V3 region characteristic of HIV type 1 env subtype B strains from injecting drug users in the former Soviet Union.

Bobkov AF, Lukashov VV, Goudsmit J, Weber JN.

AIDS Res Hum Retroviruses. 2000 Feb 10;16(3):291-4.

PMID:
10710217
45.

Circulation of subtype A and gagA/envB recombinant HIV type 1 strains among injecting drug users in St. Petersburg, Russia, correlates with geographical origin of infections.

Lukashov VV, Huismans R, Rakhmanova AG, Lisitsina ZN, Akhtyrskaya NA, Vlasov NN, Melnick OB, Goudsmit J.

AIDS Res Hum Retroviruses. 1999 Nov 20;15(17):1577-83.

PMID:
10580409
46.

Dating the origin of HIV-1 subtypes.

Goudsmit J, Lukashov VV.

Nature. 1999 Jul 22;400(6742):325-6. No abstract available.

PMID:
10432109
47.

Hepatocellular carcinoma in Egyptians with and without a history of hepatitis B virus infection: association with hepatitis C virus (HCV) infection but not with (HCV) RNA level.

Yates SC, Hafez M, Beld M, Lukashov VV, Hassan Z, Carboni G, Khaled H, McMorrow M, Attia M, Goudsmit J.

Am J Trop Med Hyg. 1999 Apr;60(4):714-20.

PMID:
10348253
48.

Insertion of two amino acids combined with changes in reverse transcriptase containing tyrosine-215 of HIV-1 resistant to multiple nucleoside analogs.

de Jong JJ, Goudsmit J, Lukashov VV, Hillebrand ME, Baan E, Huismans R, Danner SA, ten Veen JH, de Wolf F, Jurriaans S.

AIDS. 1999 Jan 14;13(1):75-80.

PMID:
10207547
49.

[The molecular epidemiological characteristics of the HIV-1 variants circulating among injection drug addicts on the territory of the CIS Nations].

Karamov EV, Shchelkanov MIu, Iudin AN, Gorbacheva AP, Burunova VV, Slavskiĭ AA, Lukashov VV, Iaroslavtseva NG.

Zh Mikrobiol Epidemiol Immunobiol. 1999 Jan-Feb;(1):39-41. Russian.

PMID:
10096198
50.

Biased nucleotide composition of the genome of HERV-K related endogenous retroviruses and its evolutionary implications.

Zsíros J, Jebbink MF, Lukashov VV, Voûte PA, Berkhout B.

J Mol Evol. 1999 Jan;48(1):102-11.

PMID:
9873082

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