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Genetic Variant Associated with Survival of Patients with Stage II-III Colon Cancer.

Penney KL, Banbury BL, Bien S, Harrison TA, Hua X, Phipps AI, Sun W, Song M, Joshi AD, Alberts SR, Allegra CJ, Atkins J, Colangelo LH, George TJ, Goldberg RM, Lucas PC, Nair SG, Shi Q, Sinicrope FA, Wolmark N, Yothers G, Peters U, Newcomb PA, Chan AT.

Clin Gastroenterol Hepatol. 2019 Dec 4. pii: S1542-3565(19)31386-2. doi: 10.1016/j.cgh.2019.11.046. [Epub ahead of print]


NSABP FB-7: a phase II randomized neoadjuvant trial with paclitaxel + trastuzumab and/or neratinib followed by chemotherapy and postoperative trastuzumab in HER2+ breast cancer.

Jacobs SA, Robidoux A, Abraham J, Pérez-Garcia JM, La Verde N, Orcutt JM, Cazzaniga ME, Piette F, Antolín S, Aguirre E, Cortes J, Llombart-Cussac A, Di Cosimo S, Kim RS, Feng H, Lipchik C, Lucas PC, Srinivasan A, Wang Y, Song N, Gavin PG, Balousek AD, Paik S, Allegra CJ, Wolmark N, Pogue-Geile KL.

Breast Cancer Res. 2019 Dec 3;21(1):133. doi: 10.1186/s13058-019-1196-y.


Multiple xylosyltransferases heterogeneously xylosylate protein N-linked glycans in Chlamydomonas reinhardtii.

Lucas PL, Mathieu-Rivet E, Chan Tchi Song P, Oltmanns A, Loutelier-Bourhis C, Plasson C, Afonso C, Hippler M, Lerouge P, Mati-Baouche N, Bardor M.

Plant J. 2019 Nov 27. doi: 10.1111/tpj.14620. [Epub ahead of print]


Pathways to antibiotics in Bangladesh: A qualitative study investigating how and when households access medicine including antibiotics for humans or animals when they are ill.

Lucas PJ, Uddin MR, Khisa N, Akter SMS, Unicomb L, Nahar P, Islam MA, Nizame FA, Rousham EK.

PLoS One. 2019 Nov 22;14(11):e0225270. doi: 10.1371/journal.pone.0225270. eCollection 2019.


Sequencing of animal viruses: quality data assurance for NGS bioinformatics.

Zamperin G, Lucas P, Cano I, Ryder D, Abbadi M, Stone D, Cuenca A, Vigouroux E, Blanchard Y, Panzarin V.

Virol J. 2019 Nov 21;16(1):140. doi: 10.1186/s12985-019-1223-8.


Highlights of the 23rd Annual Scientific Meeting of the Australasian Musculoskeletal Imaging Group (AMSIG) 2019, Queenstown, New Zealand.

Cowderoy G, Lucas P, Dickson T, Breidahl B, Doyle A, Chhabra A, Panicek D, Anderson G, McQueen F, Glazebrook K, McIlwraith W, Freitag J, Nwawka OKK, Eason A, Linklater J, Marks P.

Skeletal Radiol. 2019 Nov 15. doi: 10.1007/s00256-019-03333-7. [Epub ahead of print] No abstract available.


Afforestation for climate change mitigation: Potentials, risks and trade-offs.

Doelman JC, Stehfest E, van Vuuren DP, Tabeau A, Hof AF, Braakhekke MC, Gernaat DEHJ, van den Berg M, van Zeist WJ, Daioglou V, van Meijl H, Lucas PL.

Glob Chang Biol. 2019 Oct 26. doi: 10.1111/gcb.14887. [Epub ahead of print]


Metastatic breast cancers have reduced immune cell recruitment but harbor increased macrophages relative to their matched primary tumors.

Zhu L, Narloch JL, Onkar S, Joy M, Broadwater G, Luedke C, Hall A, Kim R, Pogue-Geile K, Sammons S, Nayyar N, Chukwueke U, Brastianos PK, Anders CK, Soloff AC, Vignali DAA, Tseng GC, Emens LA, Lucas PC, Blackwell KL, Oesterreich S, Lee AV.

J Immunother Cancer. 2019 Oct 18;7(1):265. doi: 10.1186/s40425-019-0755-1.


A Smart Mobile Health Tool Versus a Paper Action Plan to Support Self-Management of Chronic Obstructive Pulmonary Disease Exacerbations: Randomized Controlled Trial.

Boer L, Bischoff E, van der Heijden M, Lucas P, Akkermans R, Vercoulen J, Heijdra Y, Assendelft W, Schermer T.

JMIR Mhealth Uhealth. 2019 Oct 9;7(10):e14408. doi: 10.2196/14408.


Virus persistence in pig herds led to successive reassortment events between swine and human influenza A viruses, resulting in the emergence of a novel triple-reassortant swine influenza virus.

Chastagner A, Bonin E, Fablet C, Quéguiner S, Hirchaud E, Lucas P, Gorin S, Barbier N, Béven V, Garin E, Blanchard Y, Rose N, Hervé S, Simon G.

Vet Res. 2019 Oct 7;50(1):77. doi: 10.1186/s13567-019-0699-y.


Genomic polymorphism of Mycoplasma flocculare revealed by a newly developed multilocus sequence typing scheme.

Fourour S, Lucas P, Touzain F, Tocqueville V, Gautier-Bouchardon AV, Kempf I, Marois-Créhan C.

Vet Microbiol. 2019 Oct;237:108422. doi: 10.1016/j.vetmic.2019.108422. Epub 2019 Sep 16.


Experimental demonstration of coherent superpositions in an ultrasonic pseudospin.

Calderin L, Hasan MA, Jenkins NG, Lata T, Lucas P, Runge K, Deymier PA.

Sci Rep. 2019 Oct 2;9(1):14156. doi: 10.1038/s41598-019-50366-y.


A scoping review of simulation models of peer review.

Feliciani T, Luo J, Ma L, Lucas P, Squazzoni F, Marušić A, Shankar K.

Scientometrics. 2019;121(1):555-594. doi: 10.1007/s11192-019-03205-w. Epub 2019 Aug 19.


Rheuma SPACE - Standard Practice Aiming Clinical Excellence: description of the methodological approach.

Macieira C, Cunha-Miranda L, Nero P, Laires P, Bogas M, Farinha S, Freitas I, Lucas P, Sousa J, Narciso L, Mateus E, Canas da Silva J, Fonseca JE, Study Group RS.

Acta Reumatol Port. 2019 Sep 8. [Epub ahead of print]


Bidirectional Human-Swine Transmission of Seasonal Influenza A(H1N1)pdm09 Virus in Pig Herd, France, 2018.

Chastagner A, Enouf V, Peroz D, Hervé S, Lucas P, Quéguiner S, Gorin S, Beven V, Behillil S, Leneveu P, Garin E, Blanchard Y, van der Werf S, Simon G.

Emerg Infect Dis. 2019 Oct;25(10):1940-1943. doi: 10.3201/eid2510.190068.


Exploring ayahuasca-assisted therapy for addiction: A qualitative analysis of preliminary findings among an Indigenous community in Canada.

Argento E, Capler R, Thomas G, Lucas P, Tupper KW.

Drug Alcohol Rev. 2019 Nov;38(7):781-789. doi: 10.1111/dar.12985. Epub 2019 Sep 5.


Data for long-term marginal abatement cost curves of non-CO2 greenhouse gases.

Harmsen MJHM, van Vuuren DP, Nayak DR, Hof AF, Höglund-Isaksson L, Lucas PL, Nielsen JB, Smith P, Stehfest E.

Data Brief. 2019 Jul 29;25:104334. doi: 10.1016/j.dib.2019.104334. eCollection 2019 Aug.


Safety and Efficacy of T-DM1 Plus Neratinib in Patients With Metastatic HER2-Positive Breast Cancer: NSABP Foundation Trial FB-10.

Abraham J, Montero AJ, Jankowitz RC, Salkeni MA, Beumer JH, Kiesel BF, Piette F, Adamson LM, Nagy RJ, Lanman RB, Sperinde J, Huang W, Allegra CJ, Srinivasan A, Wang Y, Pogue-Geile KL, Lucas PC, Jacobs SA.

J Clin Oncol. 2019 Oct 10;37(29):2601-2609. doi: 10.1200/JCO.19.00858. Epub 2019 Aug 23.


Pathologic complete response and outcomes by intrinsic subtypes in NSABP B-41, a randomized neoadjuvant trial of chemotherapy with trastuzumab, lapatinib, or the combination.

Swain SM, Tang G, Lucas PC, Robidoux A, Goerlitz D, Harris BT, Bandos H, Geyer CE Jr, Rastogi P, Mamounas EP, Wolmark N.

Breast Cancer Res Treat. 2019 Nov;178(2):389-399. doi: 10.1007/s10549-019-05398-3. Epub 2019 Aug 19.


Insect Odorscapes: From Plant Volatiles to Natural Olfactory Scenes.

Conchou L, Lucas P, Meslin C, Proffit M, Staudt M, Renou M.

Front Physiol. 2019 Aug 2;10:972. doi: 10.3389/fphys.2019.00972. eCollection 2019. Review.


MALT1 is a critical mediator of PAR1-driven NF-κB activation and metastasis in multiple tumor types.

McAuley JR, Bailey KM, Ekambaram P, Klei LR, Kang H, Hu D, Freeman TJ, Concel VJ, Hubel NE, Lee JL, Klei HB, Cheng J, Sekar P, Bridwell RE, Covic L, Lucas PC, McAllister-Lucas LM.

Oncogene. 2019 Dec;38(49):7384-7398. doi: 10.1038/s41388-019-0958-4. Epub 2019 Aug 16.


Metallic proxies remain unsuitable for assessing the mechanics of microwear formation: reply to comment on van Casteren et al. (2018).

van Casteren A, Lucas PW, Strait DS, Michael S, Bierwisch N, Schwarzer N, Al-Fadhalah KJ, Almusallam AS, Thai LA, Saji S, Shekeban A, Swain MV.

R Soc Open Sci. 2019 Jul 10;6(7):190572. doi: 10.1098/rsos.190572. eCollection 2019 Jul. No abstract available.


Adaptive integrate-and-fire model reproduces the dynamics of olfactory receptor neuron responses in a moth.

Levakova M, Kostal L, Monsempès C, Lucas P, Kobayashi R.

J R Soc Interface. 2019 Aug 30;16(157):20190246. doi: 10.1098/rsif.2019.0246. Epub 2019 Aug 7.


Switching between Crystallization from the Glassy and the Undercooled Liquid Phase in Phase Change Material Ge2 Sb2 Te5.

Pries J, Wei S, Wuttig M, Lucas P.

Adv Mater. 2019 Sep;31(39):e1900784. doi: 10.1002/adma.201900784. Epub 2019 Aug 6.


Lysogeny in the Lactic Acid Bacterium Oenococcus oeni Is Responsible for Modified Colony Morphology on Red Grape Juice Agar.

Chaïb A, Philippe C, Jaomanjaka F, Claisse O, Jourdes M, Lucas P, Cluzet S, Le Marrec C.

Appl Environ Microbiol. 2019 Sep 17;85(19). pii: e00997-19. doi: 10.1128/AEM.00997-19. Print 2019 Oct 1.


Spectral analysis of amplitudes and phases of elastic waves: Application to topological elasticity.

Hasan MA, Calderin L, Lucas P, Runge K, Deymier PA.

J Acoust Soc Am. 2019 Jul;146(1):748. doi: 10.1121/1.5114911.


Understanding the influence of parent-clinician communication on antibiotic prescribing for children with respiratory tract infections in primary care: a qualitative observational study using a conversation analysis approach.

Cabral C, Horwood J, Symonds J, Ingram J, Lucas PJ, Redmond NM, Kai J, Hay AD, Barnes RK.

BMC Fam Pract. 2019 Jul 19;20(1):102. doi: 10.1186/s12875-019-0993-9.


Expression patterns of small numbers of transcripts from functionally-related pathways predict survival in multiple cancers.

Mandel J, Wang H, Normolle DP, Chen W, Yan Q, Lucas PC, Benos PV, Prochownik EV.

BMC Cancer. 2019 Jul 12;19(1):686. doi: 10.1186/s12885-019-5851-6.


Radiation-induced Bullous Lichen Planus: An Isomorphic Manifestation of Radiotherapy.

Cirotteau P, Lucas P, Dousset L, Cales V, Gilliot O, Jouary T.

Acta Derm Venereol. 2019 Oct 1;99(11):1033-1034. doi: 10.2340/00015555-3258. No abstract available.


FGFR4 overexpression and hotspot mutations in metastatic ER+ breast cancer are enriched in the lobular subtype.

Levine KM, Priedigkeit N, Basudan A, Tasdemir N, Sikora MJ, Sokol ES, Hartmaier RJ, Ding K, Ahmad NZ, Watters RJ, Weiss KR, Blohmer JU, Denkert C, Machleidt A, Karsten MM, Boisen MM, Elishaev E, Lucas PC, Lee AV, Oesterreich S.

NPJ Breast Cancer. 2019 Jun 27;5:19. doi: 10.1038/s41523-019-0114-x. eCollection 2019.


MRI findings are associated with time to return to play in first class cricket fast bowlers with side strain in Australia and England.

Nealon AR, Docking SI, Lucas PE, Connell DA, Koh ES, Cook JL.

J Sci Med Sport. 2019 Sep;22(9):992-996. doi: 10.1016/j.jsams.2019.05.020. Epub 2019 Jun 7.


Frequent amplifications of ESR1, ERBB2 and MDM4 in primary invasive lobular breast carcinoma.

Cao L, Basudan A, Sikora MJ, Bahreini A, Tasdemir N, Levine KM, Jankowitz RC, McAuliffe PF, Dabbs D, Haupt S, Haupt Y, Lucas PC, Lee AV, Oesterreich S, Atkinson JM.

Cancer Lett. 2019 Oct 1;461:21-30. doi: 10.1016/j.canlet.2019.06.011. Epub 2019 Jun 20.


A probabilistic framework for predicting disease dynamics: A case study of psychotic depression.

Bueno MLP, Hommersom A, Lucas PJF, Janzing J.

J Biomed Inform. 2019 Jul;95:103232. doi: 10.1016/j.jbi.2019.103232. Epub 2019 Jun 13.


Human activity is altering the world's zoogeographical regions.

Bernardo-Madrid R, Calatayud J, González-Suárez M, Rosvall M, Lucas PM, Rueda M, Antonelli A, Revilla E.

Ecol Lett. 2019 Aug;22(8):1297-1305. doi: 10.1111/ele.13321. Epub 2019 Jun 12.


Proficiency Testing of Virus Diagnostics Based on Bioinformatics Analysis of Simulated In Silico High-Throughput Sequencing Data Sets.

Brinkmann A, Andrusch A, Belka A, Wylezich C, Höper D, Pohlmann A, Nordahl Petersen T, Lucas P, Blanchard Y, Papa A, Melidou A, Oude Munnink BB, Matthijnssens J, Deboutte W, Ellis RJ, Hansmann F, Baumgärtner W, van der Vries E, Osterhaus A, Camma C, Mangone I, Lorusso A, Marcacci M, Nunes A, Pinto M, Borges V, Kroneman A, Schmitz D, Corman VM, Drosten C, Jones TC, Hendriksen RS, Aarestrup FM, Koopmans M, Beer M, Nitsche A.

J Clin Microbiol. 2019 Jul 26;57(8). pii: e00466-19. doi: 10.1128/JCM.00466-19. Print 2019 Aug.


EWS-FLI1 low Ewing sarcoma cells demonstrate decreased susceptibility to T-cell-mediated tumor cell apoptosis.

Bailey KM, Julian CM, Klinghoffer AN, Bernard H, Lucas PC, McAllister-Lucas LM.

Oncotarget. 2019 May 21;10(36):3385-3399. doi: 10.18632/oncotarget.26939. eCollection 2019 May 21.


Expanding the biodiversity of Oenococcus oeni through comparative genomics of apple cider and kombucha strains.

Lorentzen MP, Campbell-Sills H, Jorgensen TS, Nielsen TK, Coton M, Coton E, Hansen L, Lucas PM.

BMC Genomics. 2019 May 2;20(1):330. doi: 10.1186/s12864-019-5692-3.


Search for Sterile Neutrinos in MINOS and MINOS+ Using a Two-Detector Fit.

Adamson P, Anghel I, Aurisano A, Barr G, Bishai M, Blake A, Bock GJ, Bogert D, Cao SV, Carroll TJ, Castromonte CM, Chen R, Childress S, Coelho JAB, Corwin L, Cronin-Hennessy D, de Jong JK, De Rijck S, Devan AV, Devenish NE, Diwan MV, Escobar CO, Evans JJ, Falk E, Feldman GJ, Flanagan W, Frohne MV, Gabrielyan M, Gallagher HR, Germani S, Gomes RA, Goodman MC, Gouffon P, Graf N, Gran R, Grzelak K, Habig A, Hahn SR, Hartnell J, Hatcher R, Holin A, Huang J, Hylen J, Irwin GM, Isvan Z, James C, Jensen D, Kafka T, Kasahara SMS, Koerner LW, Koizumi G, Kordosky M, Kreymer A, Lang K, Ling J, Litchfield PJ, Lucas P, Mann WA, Marshak ML, Mayer N, McGivern C, Medeiros MM, Mehdiyev R, Meier JR, Messier MD, Miller WH, Mishra SR, Moed Sher S, Moore CD, Mualem L, Musser J, Naples D, Nelson JK, Newman HB, Nichol RJ, Nowak JA, O'Connor J, Orchanian M, Pahlka RB, Paley J, Patterson RB, Pawloski G, Perch A, Pfützner MM, Phan DD, Phan-Budd S, Plunkett RK, Poonthottathil N, Qiu X, Radovic A, Rebel B, Rosenfeld C, Rubin HA, Sail P, Sanchez MC, Schneps J, Schreckenberger A, Schreiner P, Sharma R, Sousa A, Tagg N, Talaga RL, Thomas J, Thomson MA, Tian X, Timmons A, Todd J, Tognini SC, Toner R, Torretta D, Tzanakos G, Urheim J, Vahle P, Viren B, Weber A, Webb RC, White C, Whitehead LH, Wojcicki SG, Zwaska R; MINOS+ Collaboration.

Phys Rev Lett. 2019 Mar 8;122(9):091803. doi: 10.1103/PhysRevLett.122.091803.


A reference collection of patient-derived cell line and xenograft models of proneural, classical and mesenchymal glioblastoma.

Stringer BW, Day BW, D'Souza RCJ, Jamieson PR, Ensbey KS, Bruce ZC, Lim YC, Goasdoué K, Offenhäuser C, Akgül S, Allan S, Robertson T, Lucas P, Tollesson G, Campbell S, Winter C, Do H, Dobrovic A, Inglis PL, Jeffree RL, Johns TG, Boyd AW.

Sci Rep. 2019 Mar 20;9(1):4902. doi: 10.1038/s41598-019-41277-z.


Stromal Tumor-infiltrating Lymphocytes in NRG Oncology/NSABP B-31 Adjuvant Trial for Early-stage HER2-positive Breast Cancer.

Kim RS, Song N, Gavin PG, Salgado R, Bandos H, Kos Z, Floris G, Eynden GGVD, Badve S, Demaria S, Rastogi P, Fehrenbacher L, Mamounas EP, Swain SM, Lawrence Wickerham D, Costantino JP, Paik S, Wolmark N, Geyer CE, Lucas PC, Pogue-Geile KL.

J Natl Cancer Inst. 2019 Mar 19. pii: djz032. doi: 10.1093/jnci/djz032. [Epub ahead of print]


Prescribing physical activity as a preventive measure for middle-aged Australians with dementia risk factors.

Annear M, Lucas P, Wilkinson T, Shimizu Y.

Aust J Prim Health. 2019 Apr;25(2):108-112. doi: 10.1071/PY18171. Review.


Serum 25-hydroxyvitamin D and mammographic density in premenopausal Spanish women.

Lope V, Toribio MJ, Pérez-Gómez B, Castelló A, Mena-Bravo A, Sierra MÁ, Lucas P, Herrán-Vidaurrázaga MDC, González-Vizcayno C, Pino MN, Cruz-Campos I, Roca-Navarro MJ, Aragonés N, Romieu I, Martínez-Cortés M, Luque de Castro MD, Pollán M.

J Steroid Biochem Mol Biol. 2019 May;189:101-107. doi: 10.1016/j.jsbmb.2019.03.004. Epub 2019 Mar 2.


Distribution of Oenococcus oeni populations in natural habitats.

Lorentzen MPG, Lucas PM.

Appl Microbiol Biotechnol. 2019 Apr;103(7):2937-2945. doi: 10.1007/s00253-019-09689-z. Epub 2019 Feb 20. Review.


Pathways of antibiotic use in Bangladesh: qualitative protocol for the PAUSE study.

Rousham EK, Islam MA, Nahar P, Lucas PJ, Naher N, Ahmed SM, Nizame FA, Unicomb L.

BMJ Open. 2019 Jan 25;9(1):e028215. doi: 10.1136/bmjopen-2018-028215.


Cannabis use behaviors and prevalence of anxiety and depressive symptoms in a cohort of Canadian medicinal cannabis users.

Turna J, Simpson W, Patterson B, Lucas P, Van Ameringen M.

J Psychiatr Res. 2019 Apr;111:134-139. doi: 10.1016/j.jpsychires.2019.01.024. Epub 2019 Jan 31.


Targeted mutation detection in breast cancer using MammaSeq™.

Smith NG, Gyanchandani R, Shah OS, Gurda GT, Lucas PC, Hartmaier RJ, Brufsky AM, Puhalla S, Bahreini A, Kota K, Wald AI, Nikiforov YE, Nikiforova MN, Oesterreich S, Lee AV.

Breast Cancer Res. 2019 Feb 8;21(1):22. doi: 10.1186/s13058-019-1102-7.


A comparison between discrete and continuous time Bayesian networks in learning from clinical time series data with irregularity.

Liu M, Stella F, Hommersom A, Lucas PJF, Boer L, Bischoff E.

Artif Intell Med. 2019 Apr;95:104-117. doi: 10.1016/j.artmed.2018.10.002. Epub 2019 Jan 22.


Lack of Evidence of Vertical Transmission of 'Candidatus Liberibacter solanacearum' by Carrot Seeds Suggests That Seed is not a Major Transmission Pathway.

Loiseau M, Renaudin I, Cousseau-Suhard P, Lucas PM, Forveille A, Gentit P.

Plant Dis. 2017 Dec;101(12):2104-2109. doi: 10.1094/PDIS-04-17-0531-RE. Epub 2017 Sep 25.


Evaluation of Intrinsic Biomechanical Risk Factors in Patellar Tendinopathy: A Retrospective Radiographic Case-Control Series.

Dan MJ, McMahon J, Parr WCH, Broe D, Lucas P, Cross M, Walsh WR.

Orthop J Sports Med. 2018 Dec 20;6(12):2325967118816038. doi: 10.1177/2325967118816038. eCollection 2018 Dec.

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