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Items: 17

1.

Using ATAC-seq and RNA-seq to increase resolution in GRN connectivity.

Lowe EK, Cuomo C, Voronov D, Arnone MI.

Methods Cell Biol. 2019;151:115-126. doi: 10.1016/bs.mcb.2018.11.001. Epub 2018 Dec 24.

PMID:
30948003
2.

Development of a goosegrass (Eleusine indica) draft genome and application to weed science research.

Zhang H, Hall N, Goertzen LR, Bi B, Chen CY, Peatman E, Lowe EK, Patel J, McElroy JS.

Pest Manag Sci. 2019 Mar 8. doi: 10.1002/ps.5389. [Epub ahead of print]

PMID:
30851005
3.

The crowns have eyes: multiple opsins found in the eyes of the crown-of-thorns starfish Acanthaster planci.

Lowe EK, Garm AL, Ullrich-Lüter E, Cuomo C, Arnone MI.

BMC Evol Biol. 2018 Nov 12;18(1):168. doi: 10.1186/s12862-018-1276-0.

4.

Developmental system drift in motor ganglion patterning between distantly related tunicates.

Lowe EK, Stolfi A.

Evodevo. 2018 Jul 23;9:18. doi: 10.1186/s13227-018-0107-0. eCollection 2018.

5.

ANISEED 2017: extending the integrated ascidian database to the exploration and evolutionary comparison of genome-scale datasets.

Brozovic M, Dantec C, Dardaillon J, Dauga D, Faure E, Gineste M, Louis A, Naville M, Nitta KR, Piette J, Reeves W, Scornavacca C, Simion P, Vincentelli R, Bellec M, Aicha SB, Fagotto M, Guéroult-Bellone M, Haeussler M, Jacox E, Lowe EK, Mendez M, Roberge A, Stolfi A, Yokomori R, Brown CT, Cambillau C, Christiaen L, Delsuc F, Douzery E, Dumollard R, Kusakabe T, Nakai K, Nishida H, Satou Y, Swalla B, Veeman M, Volff JN, Lemaire P.

Nucleic Acids Res. 2018 Jan 4;46(D1):D718-D725. doi: 10.1093/nar/gkx1108.

6.

Omics approaches to study gene regulatory networks for development in echinoderms.

Lowe EK, Cuomo C, Arnone MI.

Brief Funct Genomics. 2017 Sep 1;16(5):299-308. doi: 10.1093/bfgp/elx012. Review.

PMID:
28957458
7.

Evolutionary loss of melanogenesis in the tunicate Molgula occulta.

Racioppi C, Valoroso MC, Coppola U, Lowe EK, Brown CT, Swalla BJ, Christiaen L, Stolfi A, Ristoratore F.

Evodevo. 2017 Jul 18;8:11. doi: 10.1186/s13227-017-0074-x. eCollection 2017.

8.

Complete plastid genome sequence of goosegrass (Eleusine indica) and comparison with other Poaceae.

Zhang H, Hall N, McElroy JS, Lowe EK, Goertzen LR.

Gene. 2017 Feb 5;600:36-43. doi: 10.1016/j.gene.2016.11.038. Epub 2016 Nov 27.

PMID:
27899326
9.

Opsin evolution in the Ambulacraria.

D'Aniello S, Delroisse J, Valero-Gracia A, Lowe EK, Byrne M, Cannon JT, Halanych KM, Elphick MR, Mallefet J, Kaul-Strehlow S, Lowe CJ, Flammang P, Ullrich-Lüter E, Wanninger A, Arnone MI.

Mar Genomics. 2015 Dec;24 Pt 2:177-83. doi: 10.1016/j.margen.2015.10.001. Epub 2015 Oct 23.

10.

ANISEED 2015: a digital framework for the comparative developmental biology of ascidians.

Brozovic M, Martin C, Dantec C, Dauga D, Mendez M, Simion P, Percher M, Laporte B, Scornavacca C, Di Gregorio A, Fujiwara S, Gineste M, Lowe EK, Piette J, Racioppi C, Ristoratore F, Sasakura Y, Takatori N, Brown TC, Delsuc F, Douzery E, Gissi C, McDougall A, Nishida H, Sawada H, Swalla BJ, Yasuo H, Lemaire P.

Nucleic Acids Res. 2016 Jan 4;44(D1):D808-18. doi: 10.1093/nar/gkv966. Epub 2015 Sep 29.

11.

Divergent mechanisms regulate conserved cardiopharyngeal development and gene expression in distantly related ascidians.

Stolfi A, Lowe EK, Racioppi C, Ristoratore F, Brown CT, Swalla BJ, Christiaen L.

Elife. 2014 Sep 10;3:e03728. doi: 10.7554/eLife.03728.

12.

Reassessing the role of YUCCAs in auxin biosynthesis.

Ross JJ, Tivendale ND, Reid JB, Davies NW, Molesworth PP, Lowe EK, Smith JA, Davidson SE.

Plant Signal Behav. 2011 Mar;6(3):437-9. Epub 2011 Mar 1.

13.

Reassessing the role of N-hydroxytryptamine in auxin biosynthesis.

Tivendale ND, Davies NW, Molesworth PP, Davidson SE, Smith JA, Lowe EK, Reid JB, Ross JJ.

Plant Physiol. 2010 Dec;154(4):1957-65. doi: 10.1104/pp.110.165803. Epub 2010 Oct 25.

14.

Denaturation of beta-lactoglobulin in pressure-treated skim milk.

Anema SG, Stockmann R, Lowe EK.

J Agric Food Chem. 2005 Oct 5;53(20):7783-91.

PMID:
16190631
15.

Heat-induced redistribution of disulfide bonds in milk proteins. 2. Disulfide bonding patterns between bovine beta-lactoglobulin and kappa-casein.

Lowe EK, Anema SG, Bienvenue A, Boland MJ, Creamer LK, Jiménez-Flores R.

J Agric Food Chem. 2004 Dec 15;52(25):7669-80.

PMID:
15675819
16.

Heat-induced redistribution of disulfide bonds in milk proteins. 1. Bovine beta-lactoglobulin.

Creamer LK, Bienvenue A, Nilsson H, Paulsson M, van Wanroij M, Lowe EK, Anema SG, Boland MJ, Jiménez-Flores R.

J Agric Food Chem. 2004 Dec 15;52(25):7660-8.

PMID:
15675818
17.

Rheological properties of acid gels prepared from heated pH-adjusted skim milk.

Anema SG, Lee SK, Lowe EK, Klostermeyer H.

J Agric Food Chem. 2004 Jan 28;52(2):337-43.

PMID:
14733518

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