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Items: 13

1.

An electrogenic redox loop in sulfate reduction reveals a likely widespread mechanism of energy conservation.

Duarte AG, Catarino T, White GF, Lousa D, Neukirchen S, Soares CM, Sousa FL, Clarke TA, Pereira IAC.

Nat Commun. 2018 Dec 21;9(1):5448. doi: 10.1038/s41467-018-07839-x.

2.

A LysM domain intervenes in sequential protein-protein and protein-peptidoglycan interactions important for spore coat assembly in Bacillus subtilis.

Pereira FC, Nunes F, Cruz F, Fernandes C, Isidro AL, Lousa D, Soares CM, Moran CP Jr, Henriques AO, Serrano M.

J Bacteriol. 2018 Nov 19. pii: JB.00642-18. doi: 10.1128/JB.00642-18. [Epub ahead of print]

PMID:
30455281
3.

Study of the interactions of bovine serum albumin with a molybdenum(II) carbonyl complex by spectroscopic and molecular simulation methods.

Jeremias HF, Lousa D, Hollmann A, Coelho AC, Baltazar CS, Seixas JD, Marques AR, Santos NC, Romão CC, Soares CM.

PLoS One. 2018 Sep 27;13(9):e0204624. doi: 10.1371/journal.pone.0204624. eCollection 2018.

4.

AOX1-Subfamily Gene Members in Olea europaea cv. "Galega Vulgar"-Gene Characterization and Expression of Transcripts during IBA-Induced in Vitro Adventitious Rooting.

Velada I, Grzebelus D, Lousa D, M Soares C, Santos Macedo E, Peixe A, Arnholdt-Schmitt B, G Cardoso H.

Int J Mol Sci. 2018 Feb 17;19(2). pii: E597. doi: 10.3390/ijms19020597.

5.

Fusing simulation and experiment: The effect of mutations on the structure and activity of the influenza fusion peptide.

Lousa D, Pinto AR, Victor BL, Laio A, Veiga AS, Castanho MA, Soares CM.

Sci Rep. 2016 Jun 15;6:28099. doi: 10.1038/srep28099.

6.

Structural and Functional Characterization of an Ancient Bacterial Transglutaminase Sheds Light on the Minimal Requirements for Protein Cross-Linking.

Fernandes CG, Plácido D, Lousa D, Brito JA, Isidro A, Soares CM, Pohl J, Carrondo MA, Archer M, Henriques AO.

Biochemistry. 2015 Sep 22;54(37):5723-34. doi: 10.1021/acs.biochem.5b00661. Epub 2015 Sep 8.

PMID:
26322858
7.

Self-assembly molecular dynamics simulations shed light into the interaction of the influenza fusion Peptide with a membrane bilayer.

Victor BL, Lousa D, Antunes JM, Soares CM.

J Chem Inf Model. 2015 Apr 27;55(4):795-805. doi: 10.1021/ci500756v. Epub 2015 Apr 13.

PMID:
25826469
8.

Insights into the structure of the diiron site of RIC from Escherichia coli.

Nobre LS, Lousa D, Pacheco I, Soares CM, Teixeira M, Saraiva LM.

FEBS Lett. 2015 Feb 13;589(4):426-31. doi: 10.1016/j.febslet.2014.12.028. Epub 2015 Jan 9.

9.

Predicting the Thermodynamics and Kinetics of Helix Formation in a Cyclic Peptide Model.

Damas JM, Filipe LC, Campos SR, Lousa D, Victor BL, Baptista AM, Soares CM.

J Chem Theory Comput. 2013 Nov 12;9(11):5148-57. doi: 10.1021/ct400529k. Epub 2013 Oct 11.

PMID:
26583424
10.

A molecular perspective on nonaqueous biocatalysis: contributions from simulation studies.

Lousa D, Baptista AM, Soares CM.

Phys Chem Chem Phys. 2013 Sep 7;15(33):13723-36. doi: 10.1039/c3cp51761f. Epub 2013 Jul 18.

PMID:
23868469
11.

Interaction of counterions with subtilisin in acetonitrile: insights from molecular dynamics simulations.

Lousa D, Cianci M, Helliwell JR, Halling PJ, Baptista AM, Soares CM.

J Phys Chem B. 2012 May 24;116(20):5838-48. doi: 10.1021/jp303008g. Epub 2012 May 15.

PMID:
22546173
12.

Analyzing the molecular basis of enzyme stability in ethanol/water mixtures using molecular dynamics simulations.

Lousa D, Baptista AM, Soares CM.

J Chem Inf Model. 2012 Feb 27;52(2):465-73. doi: 10.1021/ci200455z. Epub 2012 Jan 30.

PMID:
22243049
13.

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