Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 109

1.

Adalimumab Reduces Extraintestinal Manifestations in Patients with Crohn's Disease: A Pooled Analysis of 11 Clinical Studies.

Louis EJ, Reinisch W, Schwartz DA, Löfberg R, Robinson AM, Berg S, Wang AW, Maa JF, Huang B, Pappalardo B.

Adv Ther. 2018 Apr;35(4):563-576. doi: 10.1007/s12325-018-0678-0. Epub 2018 Mar 7.

2.

PHENOS: a high-throughput and flexible tool for microorganism growth phenotyping on solid media.

Barton DBH, Georghiou D, Dave N, Alghamdi M, Walsh TA, Louis EJ, Foster SS.

BMC Microbiol. 2018 Jan 24;18(1):9. doi: 10.1186/s12866-017-1143-y.

3.

Genome Diversity and Evolution in the Budding Yeasts (Saccharomycotina).

Dujon BA, Louis EJ.

Genetics. 2017 Jun;206(2):717-750. doi: 10.1534/genetics.116.199216. Review.

4.

New yeasts-new brews: modern approaches to brewing yeast design and development.

Gibson B, Geertman JA, Hittinger CT, Krogerus K, Libkind D, Louis EJ, Magalhães F, Sampaio JP.

FEMS Yeast Res. 2017 Jun 1;17(4). doi: 10.1093/femsyr/fox038. Review.

PMID:
28582493
5.

Corrigendum: Historical Evolution of Laboratory Strains of Saccharomyces cerevisiae.

Louis EJ.

Cold Spring Harb Protoc. 2016 Sep 1;2016(9). doi: 10.1101/pdb.corr095976. No abstract available.

PMID:
27587772
6.

A New Isolation and Evaluation Method for Marine-Derived Yeast spp. with Potential Applications in Industrial Biotechnology.

Zaky AS, Greetham D, Louis EJ, Tucker GA, Du C.

J Microbiol Biotechnol. 2016 Nov 28;26(11):1891-1907. doi: 10.4014/jmb.1605.05074.

7.

Historical Evolution of Laboratory Strains of Saccharomyces cerevisiae.

Louis EJ.

Cold Spring Harb Protoc. 2016 Jul 1;2016(7). doi: 10.1101/pdb.top077750. Erratum in: Cold Spring Harb Protoc. 2016;2016(9):pdb.corr095976.

PMID:
27371602
8.

Telomere Dysfunction Triggers Palindrome Formation Independently of Double-Strand Break Repair Mechanisms.

Raykov V, Marvin ME, Louis EJ, Maringele L.

Genetics. 2016 Aug;203(4):1659-68. doi: 10.1534/genetics.115.183020. Epub 2016 Jun 22.

9.

Rif1 and Exo1 regulate the genomic instability following telomere losses.

Xue Y, Marvin ME, Ivanova IG, Lydall D, Louis EJ, Maringele L.

Aging Cell. 2016 Jun;15(3):553-62. doi: 10.1111/acel.12466. Epub 2016 Mar 22.

10.

An ultra-dense library resource for rapid deconvolution of mutations that cause phenotypes in Escherichia coli.

Nehring RB, Gu F, Lin HY, Gibson JL, Blythe MJ, Wilson R, Bravo Núñez MA, Hastings PJ, Louis EJ, Frisch RL, Hu JC, Rosenberg SM.

Nucleic Acids Res. 2016 Mar 18;44(5):e41. doi: 10.1093/nar/gkv1131. Epub 2015 Nov 17.

11.

Screening of Non- Saccharomyces cerevisiae Strains for Tolerance to Formic Acid in Bioethanol Fermentation.

Oshoma CE, Greetham D, Louis EJ, Smart KA, Phister TG, Powell C, Du C.

PLoS One. 2015 Aug 18;10(8):e0135626. doi: 10.1371/journal.pone.0135626. eCollection 2015.

12.

The genetic basis of variation in clean lineages of Saccharomyces cerevisiae in response to stresses encountered during bioethanol fermentations.

Greetham D, Wimalasena TT, Leung K, Marvin ME, Chandelia Y, Hart AJ, Phister TG, Tucker GA, Louis EJ, Smart KA.

PLoS One. 2014 Aug 12;9(8):e103233. doi: 10.1371/journal.pone.0103233. eCollection 2014. Erratum in: PLoS One. 2015;10(3):e0119343.

13.

Deletion of the Saccharomyces cerevisiae ARO8 gene, encoding an aromatic amino acid transaminase, enhances phenylethanol production from glucose.

Romagnoli G, Knijnenburg TA, Liti G, Louis EJ, Pronk JT, Daran JM.

Yeast. 2015 Jan;32(1):29-45. doi: 10.1002/yea.3015. Epub 2014 May 13.

14.

Phenotypic characterisation of Saccharomyces spp. yeast for tolerance to stresses encountered during fermentation of lignocellulosic residues to produce bioethanol.

Wimalasena TT, Greetham D, Marvin ME, Liti G, Chandelia Y, Hart A, Louis EJ, Phister TG, Tucker GA, Smart KA.

Microb Cell Fact. 2014 Mar 27;13(1):47. doi: 10.1186/1475-2859-13-47.

15.

A high-definition view of functional genetic variation from natural yeast genomes.

Bergström A, Simpson JT, Salinas F, Barré B, Parts L, Zia A, Nguyen Ba AN, Moses AM, Louis EJ, Mustonen V, Warringer J, Durbin R, Liti G.

Mol Biol Evol. 2014 Apr;31(4):872-88. doi: 10.1093/molbev/msu037. Epub 2014 Jan 14.

16.

Thymineless death is inhibited by CsrA in Escherichia coli lacking the SOS response.

Hamilton HM, Wilson R, Blythe M, Nehring RB, Fonville NC, Louis EJ, Rosenberg SM.

DNA Repair (Amst). 2013 Nov;12(11):993-9. doi: 10.1016/j.dnarep.2013.08.011. Epub 2013 Sep 25.

17.

High-resolution mapping of complex traits with a four-parent advanced intercross yeast population.

Cubillos FA, Parts L, Salinas F, Bergström A, Scovacricchi E, Zia A, Illingworth CJ, Mustonen V, Ibstedt S, Warringer J, Louis EJ, Durbin R, Liti G.

Genetics. 2013 Nov;195(3):1141-55. doi: 10.1534/genetics.113.155515. Epub 2013 Sep 13.

18.

Consecutive fecal calprotectin measurements to predict relapse in patients with ulcerative colitis receiving infliximab maintenance therapy.

De Vos M, Louis EJ, Jahnsen J, Vandervoort JG, Noman M, Dewit O, Dʼhaens GR, Franchimont D, Baert FJ, Torp RA, Henriksen M, Potvin PM, Van Hootegem PP, Hindryckx PM, Moreels TG, Collard A, Karlsen LN, Kittang E, Lambrecht G, Grimstad T, Koch J, Lygren I, Coche JC, Mana F, Van Gossum A, Belaiche J, Cool MR, Fontaine F, Maisin JM, Muls V, Neuville B, Staessen DA, Van Assche GA, de Lange T, Solberg IC, Vander Cruyssen BJ, Vermeire SA.

Inflamm Bowel Dis. 2013 Sep;19(10):2111-7. doi: 10.1097/MIB.0b013e31829b2a37.

PMID:
23883959
19.

Recurrent rearrangement during adaptive evolution in an interspecific yeast hybrid suggests a model for rapid introgression.

Dunn B, Paulish T, Stanbery A, Piotrowski J, Koniges G, Kroll E, Louis EJ, Liti G, Sherlock G, Rosenzweig F.

PLoS Genet. 2013 Mar;9(3):e1003366. doi: 10.1371/journal.pgen.1003366. Epub 2013 Mar 21.

20.

High quality de novo sequencing and assembly of the Saccharomyces arboricolus genome.

Liti G, Nguyen Ba AN, Blythe M, Müller CA, Bergström A, Cubillos FA, Dafhnis-Calas F, Khoshraftar S, Malla S, Mehta N, Siow CC, Warringer J, Moses AM, Louis EJ, Nieduszynski CA.

BMC Genomics. 2013 Jan 31;14:69. doi: 10.1186/1471-2164-14-69.

21.

The genetic basis of natural variation in oenological traits in Saccharomyces cerevisiae.

Salinas F, Cubillos FA, Soto D, Garcia V, Bergström A, Warringer J, Ganga MA, Louis EJ, Liti G, Martinez C.

PLoS One. 2012;7(11):e49640. doi: 10.1371/journal.pone.0049640. Epub 2012 Nov 21.

22.

Advances in quantitative trait analysis in yeast.

Liti G, Louis EJ.

PLoS Genet. 2012;8(8):e1002912. doi: 10.1371/journal.pgen.1002912. Epub 2012 Aug 16. Review.

23.

New reservoirs of HLA alleles: pools of rare variants enhance immune defense.

Klitz W, Hedrick P, Louis EJ.

Trends Genet. 2012 Oct;28(10):480-6. doi: 10.1016/j.tig.2012.06.007. Epub 2012 Aug 3.

PMID:
22867968
24.

Apparent ploidy effects on silencing are post-transcriptional at HML and telomeres in Saccharomyces cerevisiae.

McLaughlan JM, Liti G, Sharp S, Maslowska A, Louis EJ.

PLoS One. 2012;7(7):e39044. doi: 10.1371/journal.pone.0039044. Epub 2012 Jul 9.

25.

Telomere maintenance and telomerase activity are differentially regulated in asexual and sexual worms.

Tan TC, Rahman R, Jaber-Hijazi F, Felix DA, Chen C, Louis EJ, Aboobaker A.

Proc Natl Acad Sci U S A. 2012 Mar 13;109(11):4209-14. doi: 10.1073/pnas.1118885109. Epub 2012 Feb 27.

26.

Life history shapes trait heredity by accumulation of loss-of-function alleles in yeast.

Zörgö E, Gjuvsland A, Cubillos FA, Louis EJ, Liti G, Blomberg A, Omholt SW, Warringer J.

Mol Biol Evol. 2012 Jul;29(7):1781-9. doi: 10.1093/molbev/mss019. Epub 2012 Jan 20.

PMID:
22319169
27.

Trait variation in yeast is defined by population history.

Warringer J, Zörgö E, Cubillos FA, Zia A, Gjuvsland A, Simpson JT, Forsmark A, Durbin R, Omholt SW, Louis EJ, Liti G, Moses A, Blomberg A.

PLoS Genet. 2011 Jun;7(6):e1002111. doi: 10.1371/journal.pgen.1002111. Epub 2011 Jun 16.

28.

Revealing the genetic structure of a trait by sequencing a population under selection.

Parts L, Cubillos FA, Warringer J, Jain K, Salinas F, Bumpstead SJ, Molin M, Zia A, Simpson JT, Quail MA, Moses A, Louis EJ, Durbin R, Liti G.

Genome Res. 2011 Jul;21(7):1131-8. doi: 10.1101/gr.116731.110. Epub 2011 Mar 21.

29.

Cloning of the repertoire of individual Plasmodium falciparum var genes using transformation associated recombination (TAR).

Gaida A, Becker MM, Schmid CD, Bühlmann T, Louis EJ, Beck HP.

PLoS One. 2011 Mar 7;6(3):e17782. doi: 10.1371/journal.pone.0017782.

30.

Assessing the complex architecture of polygenic traits in diverged yeast populations.

Cubillos FA, Billi E, Zörgö E, Parts L, Fargier P, Omholt S, Blomberg A, Warringer J, Louis EJ, Liti G.

Mol Ecol. 2011 Apr;20(7):1401-13. doi: 10.1111/j.1365-294X.2011.05005.x. Epub 2011 Jan 25.

PMID:
21261765
31.

Yeast evolution and ecology meet genomics.

Dunham MJ, Louis EJ.

EMBO Rep. 2011 Jan;12(1):8-10. doi: 10.1038/embor.2010.204. Epub 2010 Dec 10.

32.

Silenced yeast chromatin is maintained by Sir2 in preference to permitting histone acetylations for efficient NER.

Irizar A, Yu Y, Reed SH, Louis EJ, Waters R.

Nucleic Acids Res. 2010 Aug;38(14):4675-86. doi: 10.1093/nar/gkq242. Epub 2010 Apr 12.

33.

Repressive and non-repressive chromatin at native telomeres in Saccharomyces cerevisiae.

Loney ER, Inglis PW, Sharp S, Pryde FE, Kent NA, Mellor J, Louis EJ.

Epigenetics Chromatin. 2009 Dec 2;2(1):18. doi: 10.1186/1756-8935-2-18.

34.

Generation of a large set of genetically tractable haploid and diploid Saccharomyces strains.

Cubillos FA, Louis EJ, Liti G.

FEMS Yeast Res. 2009 Dec;9(8):1217-25. doi: 10.1111/j.1567-1364.2009.00583.x. Epub 2009 Sep 17.

35.

Segregating YKU80 and TLC1 alleles underlying natural variation in telomere properties in wild yeast.

Liti G, Haricharan S, Cubillos FA, Tierney AL, Sharp S, Bertuch AA, Parts L, Bailes E, Louis EJ.

PLoS Genet. 2009 Sep;5(9):e1000659. doi: 10.1371/journal.pgen.1000659. Epub 2009 Sep 18.

36.

In Saccharomyces cerevisiae, yKu and subtelomeric core X sequences repress homologous recombination near telomeres as part of the same pathway.

Marvin ME, Griffin CD, Eyre DE, Barton DB, Louis EJ.

Genetics. 2009 Oct;183(2):441-51, 1SI-12SI. doi: 10.1534/genetics.109.106674. Epub 2009 Aug 3.

37.

The association of yKu with subtelomeric core X sequences prevents recombination involving telomeric sequences.

Marvin ME, Becker MM, Noel P, Hardy S, Bertuch AA, Louis EJ.

Genetics. 2009 Oct;183(2):453-67, 1SI-13SI. doi: 10.1534/genetics.109.106682. Epub 2009 Aug 3.

38.

Population genomics of domestic and wild yeasts.

Liti G, Carter DM, Moses AM, Warringer J, Parts L, James SA, Davey RP, Roberts IN, Burt A, Koufopanou V, Tsai IJ, Bergman CM, Bensasson D, O'Kelly MJ, van Oudenaarden A, Barton DB, Bailes E, Nguyen AN, Jones M, Quail MA, Goodhead I, Sims S, Smith F, Blomberg A, Durbin R, Louis EJ.

Nature. 2009 Mar 19;458(7236):337-41. doi: 10.1038/nature07743. Epub 2009 Feb 11.

39.

Evolutionary genetics: Origins of reproductive isolation.

Louis EJ.

Nature. 2009 Jan 29;457(7229):549-50. doi: 10.1038/457549a. No abstract available.

PMID:
19177123
40.

Telomeric expression sites are highly conserved in Trypanosoma brucei.

Hertz-Fowler C, Figueiredo LM, Quail MA, Becker M, Jackson A, Bason N, Brooks K, Churcher C, Fahkro S, Goodhead I, Heath P, Kartvelishvili M, Mungall K, Harris D, Hauser H, Sanders M, Saunders D, Seeger K, Sharp S, Taylor JE, Walker D, White B, Young R, Cross GA, Rudenko G, Barry JD, Louis EJ, Berriman M.

PLoS One. 2008;3(10):e3527. doi: 10.1371/journal.pone.0003527. Epub 2008 Oct 27.

41.

Isolation and analysis of the genetic diversity of repertoires of VSG expression site containing telomeres from Trypanosoma brucei gambiense, T. b. brucei and T. equiperdum.

Young R, Taylor JE, Kurioka A, Becker M, Louis EJ, Rudenko G.

BMC Genomics. 2008 Aug 12;9:385. doi: 10.1186/1471-2164-9-385.

42.
43.

Circadian rhythm gene regulation in the housefly Musca domestica.

Codd V, Dolezel D, Stehlik J, Piccin A, Garner KJ, Racey SN, Straatman KR, Louis EJ, Costa R, Sauman I, Kyriacou CP, Rosato E.

Genetics. 2007 Nov;177(3):1539-51. Epub 2007 Oct 18.

44.

Evolutionary genetics: making the most of redundancy.

Louis EJ.

Nature. 2007 Oct 11;449(7163):673-4. No abstract available.

PMID:
17928851
45.

Metabolic footprinting as a tool for discriminating between brewing yeasts.

Pope GA, MacKenzie DA, Defernez M, Aroso MA, Fuller LJ, Mellon FA, Dunn WB, Brown M, Goodacre R, Kell DB, Marvin ME, Louis EJ, Roberts IN.

Yeast. 2007 Aug;24(8):667-79.

46.

Polymorphism in IgG Fc receptor gene FCGR3A and response to infliximab in Crohn's disease: a subanalysis of the ACCENT I study.

Louis EJ, Watier HE, Schreiber S, Hampe J, Taillard F, Olson A, Thorne N, Zhang H, Colombel JF.

Pharmacogenet Genomics. 2006 Dec;16(12):911-4.

47.

Sequence diversity, reproductive isolation and species concepts in Saccharomyces.

Liti G, Barton DB, Louis EJ.

Genetics. 2006 Oct;174(2):839-50. Epub 2006 Sep 1.

48.

Chromosome ends: different sequences may provide conserved functions.

Louis EJ, Vershinin AV.

Bioessays. 2005 Jul;27(7):685-97. Review.

PMID:
15954099
49.

Monomorphic subtelomeric DNA in the filamentous fungus, Metarhizium anisopliae,contains a RecQ helicase-like gene.

Inglis PW, Rigden DJ, Mello LV, Louis EJ, Valadares-Inglis MC.

Mol Genet Genomics. 2005 Aug;274(1):79-90. Epub 2005 Jun 2.

PMID:
15931527
50.

Yeast evolution and comparative genomics.

Liti G, Louis EJ.

Annu Rev Microbiol. 2005;59:135-53. Review.

PMID:
15877535

Supplemental Content

Loading ...
Support Center