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Items: 22

1.

Environmental and epigenetic regulation of Rider retrotransposons in tomato.

Benoit M, Drost HG, Catoni M, Gouil Q, Lopez-Gomollon S, Baulcombe D, Paszkowski J.

PLoS Genet. 2019 Sep 16;15(9):e1008370. doi: 10.1371/journal.pgen.1008370. eCollection 2019 Sep.

2.

Erratum to: Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species.

Mathers TC, Chen Y, Kaithakottil G, Legeai F, Mugford ST, Baa-Puyoulet P, Bretaudeau A, Clavijo B, Colella S, Collin O, Dalmay T, Derrien T, Feng H, Gabaldón T, Jordan A, Julca I, Kettles GJ, Kowitwanich K, Lavenier D, Lenzi P, Lopez-Gomollon S, Loska D, Mapleson D, Maumus F, Moxon S, Price DR, Sugio A, van Munster M, Uzest M, Waite D, Jander G, Tagu D, Wilson AC, van Oosterhout C, Swarbreck D, Hogenhout SA.

Genome Biol. 2017 Apr 4;18(1):63. doi: 10.1186/s13059-017-1202-6. No abstract available.

3.

Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species.

Mathers TC, Chen Y, Kaithakottil G, Legeai F, Mugford ST, Baa-Puyoulet P, Bretaudeau A, Clavijo B, Colella S, Collin O, Dalmay T, Derrien T, Feng H, Gabaldón T, Jordan A, Julca I, Kettles GJ, Kowitwanich K, Lavenier D, Lenzi P, Lopez-Gomollon S, Loska D, Mapleson D, Maumus F, Moxon S, Price DR, Sugio A, van Munster M, Uzest M, Waite D, Jander G, Tagu D, Wilson AC, van Oosterhout C, Swarbreck D, Hogenhout SA.

Genome Biol. 2017 Feb 13;18(1):27. doi: 10.1186/s13059-016-1145-3. Erratum in: Genome Biol. 2017 Apr 4;18(1):63.

4.

A Database of microRNA Expression Patterns in Xenopus laevis.

Ahmed A, Ward NJ, Moxon S, Lopez-Gomollon S, Viaut C, Tomlinson ML, Patrushev I, Gilchrist MJ, Dalmay T, Dotlic D, Münsterberg AE, Wheeler GN.

PLoS One. 2015 Oct 27;10(10):e0138313. doi: 10.1371/journal.pone.0138313. eCollection 2015.

5.

Non-redundant Contribution of the Plastidial FAD8 ω-3 Desaturase to Glycerolipid Unsaturation at Different Temperatures in Arabidopsis.

Román Á, Hernández ML, Soria-García Á, López-Gomollón S, Lagunas B, Picorel R, Martínez-Rivas JM, Alfonso M.

Mol Plant. 2015 Nov 2;8(11):1599-611. doi: 10.1016/j.molp.2015.06.004. Epub 2015 Jun 14.

6.

Global discovery and characterization of small non-coding RNAs in marine microalgae.

Lopez-Gomollon S, Beckers M, Rathjen T, Moxon S, Maumus F, Mohorianu I, Moulton V, Dalmay T, Mock T.

BMC Genomics. 2014 Aug 20;15:697. doi: 10.1186/1471-2164-15-697.

7.

Purification of DNA Oligos by denaturing polyacrylamide gel electrophoresis (PAGE).

Lopez-Gomollon S, Nicolas FE.

Methods Enzymol. 2013;529:65-83. doi: 10.1016/B978-0-12-418687-3.00006-9.

PMID:
24011037
8.

Diverse correlation patterns between microRNAs and their targets during tomato fruit development indicates different modes of microRNA actions.

Lopez-Gomollon S, Mohorianu I, Szittya G, Moulton V, Dalmay T.

Planta. 2012 Dec;236(6):1875-87. doi: 10.1007/s00425-012-1734-7. Epub 2012 Aug 26.

PMID:
22922939
9.

2-oxoglutarate enhances NtcA binding activity to promoter regions of the microcystin synthesis gene cluster.

Kuniyoshi TM, Gonzalez A, Lopez-Gomollon S, Valladares A, Bes MT, Fillat MF, Peleato ML.

FEBS Lett. 2011 Dec 15;585(24):3921-6. doi: 10.1016/j.febslet.2011.10.034. Epub 2011 Nov 3.

10.

Bioengineering RNA silencing across the life kingdoms.

Alvarez-Fernandez R, Lopez-Gomollon S, Lopez-Martinez AF, Nicolas FE.

Recent Pat Biotechnol. 2011 Aug;5(2):118-46.

PMID:
21707526
11.

Development of a new high-performance liquid chromatography-electrospray ionization time-of-flight mass spectrometry method for the determination of low molecular mass organic acids in plant tissue extracts.

Rellan-Alvarez R, Lopez-Gomollon S, Abadia J, Alvarez-Fernandez A.

J Agric Food Chem. 2011 Jul 13;59(13):6864-70. doi: 10.1021/jf200482a. Epub 2011 Jun 15.

PMID:
21619056
12.

Profiling of short RNAs during fleshy fruit development reveals stage-specific sRNAome expression patterns.

Mohorianu I, Schwach F, Jing R, Lopez-Gomollon S, Moxon S, Szittya G, Sorefan K, Moulton V, Dalmay T.

Plant J. 2011 Jul;67(2):232-46. doi: 10.1111/j.1365-313X.2011.04586.x. Epub 2011 May 9.

13.

Detecting sRNAs by Northern blotting.

López-Gomollón S.

Methods Mol Biol. 2011;732:25-38. doi: 10.1007/978-1-61779-083-6_3.

PMID:
21431703
14.

Recent patents in RNA silencing in plants: constructs, methods and applications in plant biotechnology.

López-Gomollón S, Dalmay T.

Recent Pat DNA Gene Seq. 2010 Nov;4(3):155-66. Review.

PMID:
21288195
15.

Characterisation and expression of microRNAs in developing wings of the neotropical butterfly Heliconius melpomene.

Surridge AK, Lopez-Gomollon S, Moxon S, Maroja LS, Rathjen T, Nadeau NJ, Dalmay T, Jiggins CD.

BMC Genomics. 2011 Jan 26;12:62. doi: 10.1186/1471-2164-12-62.

16.

Silencing human cancer: identification and uses of microRNAs.

Nicolas FE, Lopez-Gomollon S, Lopez-Martinez AF, Dalmay T.

Recent Pat Anticancer Drug Discov. 2011 Jan;6(1):94-105. Review.

PMID:
21110826
17.

RNA silencing: Recent developments on miRNAs.

Nicolas FE, Lopez-Gomollon S, Lopez-Martinez AF, Dalmay T.

Recent Pat DNA Gene Seq. 2009;3(2):77-87. Review.

PMID:
19519577
18.

New insights into the role of Fur proteins: FurB (All2473) from Anabaena protects DNA and increases cell survival under oxidative stress.

López-Gomollón S, Sevilla E, Bes MT, Peleato ML, Fillat MF.

Biochem J. 2009 Feb 15;418(1):201-7. doi: 10.1042/BJ20081066.

PMID:
18945213
19.

Cross-talk between iron and nitrogen regulatory networks in anabaena (Nostoc) sp. PCC 7120: identification of overlapping genes in FurA and NtcA regulons.

López-Gomollón S, Hernández JA, Pellicer S, Angarica VE, Peleato ML, Fillat MF.

J Mol Biol. 2007 Nov 16;374(1):267-81. Epub 2007 Sep 11.

PMID:
17920076
20.

Expression of furA is modulated by NtcA and strongly enhanced in heterocysts of Anabaena sp. PCC 7120.

López-Gomollón S, Hernández JA, Wolk CP, Peleato ML, Fillat MF.

Microbiology. 2007 Jan;153(Pt 1):42-50.

PMID:
17185533
21.

Interaction of FurA from Anabaena sp. PCC 7120 with DNA: a reducing environment and the presence of Mn(2+) are positive effectors in the binding to isiB and furA promoters.

Hernández JA, López-Gomollón S, Muro-Pastor A, Valladares A, Bes MT, Peleato ML, Fillat MF.

Biometals. 2006 Jun;19(3):259-68.

PMID:
16799864
22.

Three fur homologues from Anabaena sp. PCC7120: exploring reciprocal protein-promoter recognition.

Hernández JA, López-Gomollón S, Bes MT, Fillat MF, Peleato ML.

FEMS Microbiol Lett. 2004 Jul 15;236(2):275-82.

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