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Items: 39

1.

Ongoing Transposon-Mediated Genome Reduction in the Luminous Bacterial Symbionts of Deep-Sea Ceratioid Anglerfishes.

Hendry TA, Freed LL, Fader D, Fenolio D, Sutton TT, Lopez JV.

MBio. 2018 Jun 26;9(3). pii: e01033-18. doi: 10.1128/mBio.01033-18.

2.

Culture-independent Characterization of the Microbiome of Healthy Pulp.

Widmer C, Skutas J, Easson C, Lopez JV, Torneck C, Flax M, Sayin TC.

J Endod. 2018 Jul;44(7):1132-1139.e2. doi: 10.1016/j.joen.2018.03.009. Epub 2018 May 24.

PMID:
29803335
3.

Fine grained compositional analysis of Port Everglades Inlet microbiome using high throughput DNA sequencing.

O'Connell L, Gao S, McCorquodale D, Fleisher J, Lopez JV.

PeerJ. 2018 May 8;6:e4671. doi: 10.7717/peerj.4671. eCollection 2018.

4.

Is there a link between aging and microbiome diversity in exceptional mammalian longevity?

Hughes GM, Leech J, Puechmaille SJ, Lopez JV, Teeling EC.

PeerJ. 2018 Jan 8;6:e4174. doi: 10.7717/peerj.4174. eCollection 2018.

5.

Bleaching events regulate shifts from corals to excavating sponges in algae-dominated reefs.

Chaves-Fonnegra A, Riegl B, Zea S, Lopez JV, Smith T, Brandt M, Gilliam DS.

Glob Chang Biol. 2018 Feb;24(2):773-785. doi: 10.1111/gcb.13962. Epub 2017 Dec 1.

PMID:
29076634
6.

Correlation Between Placental Matrix Metalloproteinase 9 and Tumor Necrosis Factor-α Protein Expression Throughout Gestation in Normal Human Pregnancy.

Basu J, Agamasu E, Bendek B, Salafia CM, Mishra A, Lopez JV, Kroes J, Dragich SC, Thakur A, Mikhail M.

Reprod Sci. 2018 Apr;25(4):621-627. doi: 10.1177/1933719117725819. Epub 2017 Aug 18.

PMID:
28820024
7.

Advancing Genomics through the Global Invertebrate Genomics Alliance (GIGA).

Voolstra CR; GIGA Community of Scientists (COS), Wörheide G, Lopez JV.

Invertebr Syst. 2017 Mar;31(1):1-7. Epub 2017 Mar 16.

8.

Cooperation and competition shape ecological resistance during periodic spatial disturbance of engineered bacteria.

Wilson CE, Lopatkin AJ, Craddock TJ, Driscoll WW, Eldakar OT, Lopez JV, Smith RP.

Sci Rep. 2017 Mar 27;7(1):440. doi: 10.1038/s41598-017-00588-9.

9.

Evolution of group I introns in Porifera: new evidence for intron mobility and implications for DNA barcoding.

Schuster A, Lopez JV, Becking LE, Kelly M, Pomponi SA, Wörheide G, Erpenbeck D, Cárdenas P.

BMC Evol Biol. 2017 Mar 20;17(1):82. doi: 10.1186/s12862-017-0928-9.

10.

The human microbiome: an emerging tool in forensics.

Hampton-Marcell JT, Lopez JV, Gilbert JA.

Microb Biotechnol. 2017 Mar;10(2):228-230. doi: 10.1111/1751-7915.12699. No abstract available.

11.

Fish-T1K (Transcriptomes of 1,000 Fishes) Project: large-scale transcriptome data for fish evolution studies.

Sun Y, Huang Y, Li X, Baldwin CC, Zhou Z, Yan Z, Crandall KA, Zhang Y, Zhao X, Wang M, Wong A, Fang C, Zhang X, Huang H, Lopez JV, Kilfoyle K, Zhang Y, Ortí G, Venkatesh B, Shi Q.

Gigascience. 2016 May 3;5:18. doi: 10.1186/s13742-016-0124-7. eCollection 2016.

12.

Using probabilities of enterococci exceedance and logistic regression to evaluate long term weekly beach monitoring data.

Aranda D, Lopez JV, Solo-Gabriele HM, Fleisher JM.

J Water Health. 2016 Feb;14(1):81-9. doi: 10.2166/wh.2015.030.

PMID:
26837832
13.

Dynamics of marine bacterial community diversity of the coastal waters of the reefs, inlets, and wastewater outfalls of southeast Florida.

Campbell AM, Fleisher J, Sinigalliano C, White JR, Lopez JV.

Microbiologyopen. 2015 Jun;4(3):390-408. doi: 10.1002/mbo3.245. Epub 2015 Mar 5.

14.

Population structure and dispersal of the coral-excavating sponge Cliona delitrix.

Chaves-Fonnegra A, Feldheim KA, Secord J, Lopez JV.

Mol Ecol. 2015 Apr;24(7):1447-66. doi: 10.1111/mec.13134. Epub 2015 Mar 20.

PMID:
25732628
15.

Two distinct microbial communities revealed in the sponge Cinachyrella.

Cuvelier ML, Blake E, Mulheron R, McCarthy PJ, Blackwelder P, Thurber RL, Lopez JV.

Front Microbiol. 2014 Nov 4;5:581. doi: 10.3389/fmicb.2014.00581. eCollection 2014.

16.

Patterns of population structure for inshore bottlenose dolphins along the eastern United States.

Richards VP, Greig TW, Fair PA, McCulloch SD, Politz C, Natoli A, Driscoll CA, Hoelzel AR, David V, Bossart GD, Lopez JV.

J Hered. 2013 Nov-Dec;104(6):765-78. doi: 10.1093/jhered/est070.

17.

Pyrosequencing of bacterial symbionts within Axinella corrugata sponges: diversity and seasonal variability.

White JR, Patel J, Ottesen A, Arce G, Blackwelder P, Lopez JV.

PLoS One. 2012;7(6):e38204. doi: 10.1371/journal.pone.0038204. Epub 2012 Jun 12.

18.

Co-cultures of Pseudomonas aeruginosa and Roseobacter denitrificans reveal shifts in gene expression levels compared to solo cultures.

Conway CA, Esiobu N, Lopez JV.

ScientificWorldJournal. 2012;2012:120108. doi: 10.1100/2012/120108. Epub 2012 Apr 1.

19.

Vibrio caribbeanicus sp. nov., isolated from the marine sponge Scleritoderma cyanea.

Hoffmann M, Monday SR, Allard MW, Strain EA, Whittaker P, Naum M, McCarthy PJ, Lopez JV, Fischer M, Brown EW.

Int J Syst Evol Microbiol. 2012 Aug;62(Pt 8):1736-43. doi: 10.1099/ijs.0.032375-0. Epub 2011 Sep 19.

PMID:
21930677
20.

Population dynamics of Vibrio spp. associated with marine sponge microcosms.

Hoffmann M, Fischer M, Ottesen A, McCarthy PJ, Lopez JV, Brown EW, Monday SR.

ISME J. 2010 Dec;4(12):1608-12. doi: 10.1038/ismej.2010.85. Epub 2010 Jul 1.

PMID:
20596073
21.

Beneficial effects on the reproductive performance of sows of administering prostaglandin analogues after farrowing.

Lopez JV, Ptaszynska M, Gonzalez P, Jiménez M, Martens MR.

Vet Rec. 2009 Jun 27;164(26):807-9.

PMID:
19561350
22.

A new prokaryotic farnesyldiphosphate synthase from the octocoral Eunicea fusca: differential display, inverse PCR, cloning, and characterization.

Ranzer LK, Brück TB, Brück WM, Lopez JV, Kerr RG.

Mar Biotechnol (NY). 2009 Jan-Feb;11(1):62-73. doi: 10.1007/s10126-008-9120-y. Epub 2008 Jul 15.

PMID:
18626710
23.

[Fever in Emergency Department: screening for severe disease].

López JV, Rojo JM, Rodríguez OM, Pérez BF, Sedano AF, Clotet NC, Mateo RS, Gaviria AZ.

Rev Clin Esp. 2008 Mar;208(3):130-4. Spanish.

PMID:
18275766
24.

Membranous glomerulonephritis in the Iberian lynx (Lynx pardinus).

Jiménez A, Sánchez B, Pérez Alenza D, García P, López JV, Rodriguez A, Muñoz A, Martínez F, Vargas A, Peña L.

Vet Immunol Immunopathol. 2008 Jan 15;121(1-2):34-43. Epub 2007 Aug 6.

PMID:
17931707
25.

Use of real-time qPCR to quantify members of the unculturable heterotrophic bacterial community in a deep sea marine sponge, Vetulina sp.

Cassler M, Peterson CL, Ledger A, Pomponi SA, Wright AE, Winegar R, McCarthy PJ, Lopez JV.

Microb Ecol. 2008 Apr;55(3):384-94. Epub 2007 Jul 30.

PMID:
17661179
26.

Metabolites from the marine-derived fungus Chromocleista sp. isolated from a deep-water sediment sample collected in the Gulf of Mexico.

Park YC, Gunasekera SP, Lopez JV, McCarthy PJ, Wright AE.

J Nat Prod. 2006 Apr;69(4):580-4.

PMID:
16643030
27.

Localization of polyketide synthase encoding genes to the toxic dinoflagellate Karenia brevis.

Snyder RV, Guerrero MA, Sinigalliano CD, Winshell J, Perez R, Lopez JV, Rein KS.

Phytochemistry. 2005 Aug;66(15):1767-80.

28.

HBMMD: an enhanced database of the microorganisms associated with deeper water marine invertebrates.

Gunasekera AS, Sfanos KS, Harmody DK, Pomponi SA, McCarthy PJ, Lopez JV.

Appl Microbiol Biotechnol. 2005 Jan;66(4):373-6. Epub 2004 Nov 16. Review.

PMID:
15599519
30.

Polyketide synthase genes from marine dinoflagellates.

Snyder RV, Gibbs PD, Palacios A, Abiy L, Dickey R, Lopez JV, Rein KS.

Mar Biotechnol (NY). 2003 Jan-Feb;5(1):1-12.

PMID:
12925913
31.

Characterization of genetic markers for in vitro cell line identification of the marine sponge Axinella corrugata.

Lopez JV, Peterson CL, Willoughby R, Wright AE, Enright E, Zoladz S, Reed JK, Pomponi SA.

J Hered. 2002 Jan-Feb;93(1):27-36.

PMID:
12011172
33.

Rates of nuclear and cytoplasmic mitochondrial DNA sequence divergence in mammals.

Lopez JV, Culver M, Stephens JC, Johnson WE, O'Brien SJ.

Mol Biol Evol. 1997 Mar;14(3):277-86.

PMID:
9066795
34.

Molecular phylogeny of mitochondrial cytochrome b and 12S rRNA sequences in the Felidae: ocelot and domestic cat lineages.

Masuda R, Lopez JV, Slattery JP, Yuhki N, O'Brien SJ.

Mol Phylogenet Evol. 1996 Dec;6(3):351-65.

PMID:
8975691
36.

Rapid evolution of a heteroplasmic repetitive sequence in the mitochondrial DNA control region of carnivores.

Hoelzel AR, Lopez JV, Dover GA, O'Brien SJ.

J Mol Evol. 1994 Aug;39(2):191-9.

PMID:
7932782
37.

Numt, a recent transfer and tandem amplification of mitochondrial DNA to the nuclear genome of the domestic cat.

Lopez JV, Yuhki N, Masuda R, Modi W, O'Brien SJ.

J Mol Evol. 1994 Aug;39(2):174-90. Erratum in: J Mol Evol 1994 Nov;39(5):544.

PMID:
7932781
38.

HSV-2-induced tumorigenicity in HPV16-immortalized human genital keratinocytes.

DiPaolo JA, Woodworth CD, Popescu NC, Koval DL, Lopez JV, Doniger J.

Virology. 1990 Aug;177(2):777-9.

PMID:
2164733
39.

Both acromioclavicular joints with one exposure.

LOPEZ JV, JOHNSON HJ.

Xray Tech. 1959 Sep;31:141-2. No abstract available.

PMID:
14418230

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