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Items: 1 to 50 of 113

1.

Single-Cell Reconstruction of Emerging Population Activity in an Entire Developing Circuit.

Wan Y, Wei Z, Looger LL, Koyama M, Druckmann S, Keller PJ.

Cell. 2019 Oct 3;179(2):355-372.e23. doi: 10.1016/j.cell.2019.08.039. Epub 2019 Sep 26.

PMID:
31564455
2.

Author Correction: Kilohertz frame-rate two-photon tomography.

Kazemipour A, Novak O, Flickinger D, Marvin JS, Abdelfattah AS, King J, Borden PM, Kim JJ, Al-Abdullatif SH, Deal PE, Miller EW, Schreiter ER, Druckmann S, Svoboda K, Looger LL, Podgorski K.

Nat Methods. 2019 Sep;16(9):932. doi: 10.1038/s41592-019-0545-1.

PMID:
31388143
3.

Kilohertz frame-rate two-photon tomography.

Kazemipour A, Novak O, Flickinger D, Marvin JS, Abdelfattah AS, King J, Borden PM, Kim JJ, Al-Abdullatif SH, Deal PE, Miller EW, Schreiter ER, Druckmann S, Svoboda K, Looger LL, Podgorski K.

Nat Methods. 2019 Aug;16(8):778-786. doi: 10.1038/s41592-019-0493-9. Epub 2019 Jul 29. Erratum in: Nat Methods. 2019 Sep;16(9):932.

PMID:
31363222
4.

A genetically encoded fluorescent sensor for in vivo imaging of GABA.

Marvin JS, Shimoda Y, Magloire V, Leite M, Kawashima T, Jensen TP, Kolb I, Knott EL, Novak O, Podgorski K, Leidenheimer NJ, Rusakov DA, Ahrens MB, Kullmann DM, Looger LL.

Nat Methods. 2019 Aug;16(8):763-770. doi: 10.1038/s41592-019-0471-2. Epub 2019 Jul 15.

PMID:
31308547
5.

Glia Accumulate Evidence that Actions Are Futile and Suppress Unsuccessful Behavior.

Mu Y, Bennett DV, Rubinov M, Narayan S, Yang CT, Tanimoto M, Mensh BD, Looger LL, Ahrens MB.

Cell. 2019 Jun 27;178(1):27-43.e19. doi: 10.1016/j.cell.2019.05.050. Epub 2019 Jun 20.

6.

High-performance calcium sensors for imaging activity in neuronal populations and microcompartments.

Dana H, Sun Y, Mohar B, Hulse BK, Kerlin AM, Hasseman JP, Tsegaye G, Tsang A, Wong A, Patel R, Macklin JJ, Chen Y, Konnerth A, Jayaraman V, Looger LL, Schreiter ER, Svoboda K, Kim DS.

Nat Methods. 2019 Jul;16(7):649-657. doi: 10.1038/s41592-019-0435-6. Epub 2019 Jun 17.

PMID:
31209382
7.

Mechanistic Characterization of RASGRP1 Variants Identifies an hnRNP-K-Regulated Transcriptional Enhancer Contributing to SLE Susceptibility.

Molineros JE, Singh B, Terao C, Okada Y, Kaplan J, McDaniel B, Akizuki S, Sun C, Webb CF, Looger LL, Nath SK.

Front Immunol. 2019 May 20;10:1066. doi: 10.3389/fimmu.2019.01066. eCollection 2019.

8.

Inaccurate secondary structure predictions often indicate protein fold switching.

Mishra S, Looger LL, Porter LL.

Protein Sci. 2019 Aug;28(8):1487-1493. doi: 10.1002/pro.3664. Epub 2019 Jun 17.

9.

Quantitative in vivo imaging of neuronal glucose concentrations with a genetically encoded fluorescence lifetime sensor.

Díaz-García CM, Lahmann C, Martínez-François JR, Li B, Koveal D, Nathwani N, Rahman M, Keller JP, Marvin JS, Looger LL, Yellen G.

J Neurosci Res. 2019 Aug;97(8):946-960. doi: 10.1002/jnr.24433. Epub 2019 May 20.

PMID:
31106909
10.

Amino acid signatures of HLA Class-I and II molecules are strongly associated with SLE susceptibility and autoantibody production in Eastern Asians.

Molineros JE, Looger LL, Kim K, Okada Y, Terao C, Sun C, Zhou XJ, Raj P, Kochi Y, Suzuki A, Akizuki S, Nakabo S, Bang SY, Lee HS, Kang YM, Suh CH, Chung WT, Park YB, Choe JY, Shim SC, Lee SS, Zuo X, Yamamoto K, Li QZ, Shen N, Porter LL, Harley JB, Chua KH, Zhang H, Wakeland EK, Tsao BP, Bae SC, Nath SK.

PLoS Genet. 2019 Apr 25;15(4):e1008092. doi: 10.1371/journal.pgen.1008092. eCollection 2019 Apr.

11.

Multiplex imaging relates quantal glutamate release to presynaptic Ca2+ homeostasis at multiple synapses in situ.

Jensen TP, Zheng K, Cole N, Marvin JS, Looger LL, Rusakov DA.

Nat Commun. 2019 Mar 29;10(1):1414. doi: 10.1038/s41467-019-09216-8.

12.

Author Correction: Stability, affinity, and chromatic variants of the glutamate sensor iGluSnFR.

Marvin JS, Scholl B, Wilson DE, Podgorski K, Kazemipour A, Müller JA, Schoch S, Quiroz FJU, Rebola N, Bao H, Little JP, Tkachuk AN, Cai E, Hantman AW, Wang SS, DePiero VJ, Borghuis BG, Chapman ER, Dietrich D, DiGregorio DA, Fitzpatrick D, Looger LL.

Nat Methods. 2019 Apr;16(4):351. doi: 10.1038/s41592-019-0363-5.

PMID:
30820033
13.

A genetically encoded single-wavelength sensor for imaging cytosolic and cell surface ATP.

Lobas MA, Tao R, Nagai J, Kronschläger MT, Borden PM, Marvin JS, Looger LL, Khakh BS.

Nat Commun. 2019 Feb 12;10(1):711. doi: 10.1038/s41467-019-08441-5.

14.

Determining the pharmacokinetics of nicotinic drugs in the endoplasmic reticulum using biosensors.

Shivange AV, Borden PM, Muthusamy AK, Nichols AL, Bera K, Bao H, Bishara I, Jeon J, Mulcahy MJ, Cohen B, O'Riordan SL, Kim C, Dougherty DA, Chapman ER, Marvin JS, Looger LL, Lester HA.

J Gen Physiol. 2019 Jun 3;151(6):738-757. doi: 10.1085/jgp.201812201. Epub 2019 Feb 4.

PMID:
30718376
15.

Publisher Correction: Stability, affinity, and chromatic variants of the glutamate sensor iGluSnFR.

Marvin JS, Scholl B, Wilson DE, Podgorski K, Kazemipour A, Müller JA, Schoch S, Urra Quiroz FJ, Rebola N, Bao H, Little JP, Tkachuk AN, Cai E, Hantman AW, Wang SS, DePiero VJ, Borghuis BG, Chapman ER, Dietrich D, DiGregorio DA, Fitzpatrick D, Looger LL.

Nat Methods. 2019 Feb;16(2):206. doi: 10.1038/s41592-018-0300-z.

PMID:
30602783
16.

Distinct descending motor cortex pathways and their roles in movement.

Economo MN, Viswanathan S, Tasic B, Bas E, Winnubst J, Menon V, Graybuck LT, Nguyen TN, Smith KA, Yao Z, Wang L, Gerfen CR, Chandrashekar J, Zeng H, Looger LL, Svoboda K.

Nature. 2018 Nov;563(7729):79-84. doi: 10.1038/s41586-018-0642-9. Epub 2018 Oct 31.

PMID:
30382200
17.

Stability, affinity, and chromatic variants of the glutamate sensor iGluSnFR.

Marvin JS, Scholl B, Wilson DE, Podgorski K, Kazemipour A, Müller JA, Schoch S, Quiroz FJU, Rebola N, Bao H, Little JP, Tkachuk AN, Cai E, Hantman AW, Wang SS, DePiero VJ, Borghuis BG, Chapman ER, Dietrich D, DiGregorio DA, Fitzpatrick D, Looger LL.

Nat Methods. 2018 Nov;15(11):936-939. doi: 10.1038/s41592-018-0171-3. Epub 2018 Oct 30. Erratum in: Nat Methods. 2019 Feb;16(2):206. Nat Methods. 2019 Feb 28;:.

18.

Aberrant Calcium Signaling in Astrocytes Inhibits Neuronal Excitability in a Human Down Syndrome Stem Cell Model.

Mizuno GO, Wang Y, Shi G, Wang Y, Sun J, Papadopoulos S, Broussard GJ, Unger EK, Deng W, Weick J, Bhattacharyya A, Chen CY, Yu G, Looger LL, Tian L.

Cell Rep. 2018 Jul 10;24(2):355-365. doi: 10.1016/j.celrep.2018.06.033.

19.

Extant fold-switching proteins are widespread.

Porter LL, Looger LL.

Proc Natl Acad Sci U S A. 2018 Jun 5;115(23):5968-5973. doi: 10.1073/pnas.1800168115. Epub 2018 May 21.

20.

Functional Imaging and Optogenetics in Drosophila.

Simpson JH, Looger LL.

Genetics. 2018 Apr;208(4):1291-1309. doi: 10.1534/genetics.117.300228. Review.

21.

Neural signatures of dynamic stimulus selection in Drosophila.

Sun Y, Nern A, Franconville R, Dana H, Schreiter ER, Looger LL, Svoboda K, Kim DS, Hermundstad AM, Jayaraman V.

Nat Neurosci. 2017 Aug;20(8):1104-1113. doi: 10.1038/nn.4581. Epub 2017 Jun 12.

PMID:
28604683
22.

Diverse protocols for correlative super-resolution fluorescence imaging and electron microscopy of chemically fixed samples.

Kopek BG, Paez-Segala MG, Shtengel G, Sochacki KA, Sun MG, Wang Y, Xu CS, van Engelenburg SB, Taraska JW, Looger LL, Hess HF.

Nat Protoc. 2017 May;12(5):916-946. doi: 10.1038/nprot.2017.017. Epub 2017 Apr 6.

23.

Confirmation of five novel susceptibility loci for systemic lupus erythematosus (SLE) and integrated network analysis of 82 SLE susceptibility loci.

Molineros JE, Yang W, Zhou XJ, Sun C, Okada Y, Zhang H, Heng Chua K, Lau YL, Kochi Y, Suzuki A, Yamamoto K, Ma J, Bang SY, Lee HS, Kim K, Bae SC, Zhang H, Shen N, Looger LL, Nath SK.

Hum Mol Genet. 2017 Mar 15;26(6):1205-1216. doi: 10.1093/hmg/ddx026.

24.

All-optical functional synaptic connectivity mapping in acute brain slices using the calcium integrator CaMPARI.

Zolnik TA, Sha F, Johenning FW, Schreiter ER, Looger LL, Larkum ME, Sachdev RN.

J Physiol. 2017 Mar 1;595(5):1465-1477. doi: 10.1113/JP273116. Epub 2016 Dec 14.

25.

A Designer AAV Variant Permits Efficient Retrograde Access to Projection Neurons.

Tervo DG, Hwang BY, Viswanathan S, Gaj T, Lavzin M, Ritola KD, Lindo S, Michael S, Kuleshova E, Ojala D, Huang CC, Gerfen CR, Schiller J, Dudman JT, Hantman AW, Looger LL, Schaffer DV, Karpova AY.

Neuron. 2016 Oct 19;92(2):372-382. doi: 10.1016/j.neuron.2016.09.021. Epub 2016 Oct 6.

26.
27.

A timecourse analysis of systemic and gonadal effects of temperature on sexual development of the red-eared slider turtle Trachemys scripta elegans.

Czerwinski M, Natarajan A, Barske L, Looger LL, Capel B.

Dev Biol. 2016 Dec 1;420(1):166-177. doi: 10.1016/j.ydbio.2016.09.018. Epub 2016 Sep 23.

28.

Molecularly Defined Subplate Neurons Project Both to Thalamocortical Recipient Layers and Thalamus.

Viswanathan S, Sheikh A, Looger LL, Kanold PO.

Cereb Cortex. 2017 Oct 1;27(10):4759-4768. doi: 10.1093/cercor/bhw271.

29.

Falling apart.

Marvin JS, Looger LL.

Elife. 2016 Jun 27;5. pii: e18203. doi: 10.7554/eLife.18203.

30.

Real-time quantification of single RNA translation dynamics in living cells.

Morisaki T, Lyon K, DeLuca KF, DeLuca JG, English BP, Zhang Z, Lavis LD, Grimm JB, Viswanathan S, Looger LL, Lionnet T, Stasevich TJ.

Science. 2016 Jun 17;352(6292):1425-9. doi: 10.1126/science.aaf0899. Epub 2016 May 5.

31.

GFP-Aequorin Protein Sensor for Ex Vivo and In Vivo Imaging of Ca(2+) Dynamics in High-Ca(2+) Organelles.

Navas-Navarro P, Rojo-Ruiz J, Rodriguez-Prados M, Ganfornina MD, Looger LL, Alonso MT, García-Sancho J.

Cell Chem Biol. 2016 Jun 23;23(6):738-45. doi: 10.1016/j.chembiol.2016.05.010. Epub 2016 Jun 9.

32.

Dysfunctional Calcium and Glutamate Signaling in Striatal Astrocytes from Huntington's Disease Model Mice.

Jiang R, Diaz-Castro B, Looger LL, Khakh BS.

J Neurosci. 2016 Mar 23;36(12):3453-70. doi: 10.1523/JNEUROSCI.3693-15.2016.

33.

Sensitive red protein calcium indicators for imaging neural activity.

Dana H, Mohar B, Sun Y, Narayan S, Gordus A, Hasseman JP, Tsegaye G, Holt GT, Hu A, Walpita D, Patel R, Macklin JJ, Bargmann CI, Ahrens MB, Schreiter ER, Jayaraman V, Looger LL, Svoboda K, Kim DS.

Elife. 2016 Mar 24;5. pii: e12727. doi: 10.7554/eLife.12727.

34.

High-density genotyping of immune-related loci identifies new SLE risk variants in individuals with Asian ancestry.

Sun C, Molineros JE, Looger LL, Zhou XJ, Kim K, Okada Y, Ma J, Qi YY, Kim-Howard X, Motghare P, Bhattarai K, Adler A, Bang SY, Lee HS, Kim TH, Kang YM, Suh CH, Chung WT, Park YB, Choe JY, Shim SC, Kochi Y, Suzuki A, Kubo M, Sumida T, Yamamoto K, Lee SS, Kim YJ, Han BG, Dozmorov M, Kaufman KM, Wren JD, Harley JB, Shen N, Chua KH, Zhang H, Bae SC, Nath SK.

Nat Genet. 2016 Mar;48(3):323-30. doi: 10.1038/ng.3496. Epub 2016 Jan 25.

35.

Direct In Vivo Manipulation and Imaging of Calcium Transients in Neutrophils Identify a Critical Role for Leading-Edge Calcium Flux.

Beerman RW, Matty MA, Au GG, Looger LL, Choudhury KR, Keller PJ, Tobin DM.

Cell Rep. 2015 Dec 15;13(10):2107-17. doi: 10.1016/j.celrep.2015.11.010. Epub 2015 Dec 7.

36.

A Low Affinity GCaMP3 Variant (GCaMPer) for Imaging the Endoplasmic Reticulum Calcium Store.

Henderson MJ, Baldwin HA, Werley CA, Boccardo S, Whitaker LR, Yan X, Holt GT, Schreiter ER, Looger LL, Cohen AE, Kim DS, Harvey BK.

PLoS One. 2015 Oct 9;10(10):e0139273. doi: 10.1371/journal.pone.0139273. eCollection 2015.

37.

High-performance probes for light and electron microscopy.

Viswanathan S, Williams ME, Bloss EB, Stasevich TJ, Speer CM, Nern A, Pfeiffer BD, Hooks BM, Li WP, English BP, Tian T, Henry GL, Macklin JJ, Patel R, Gerfen CR, Zhuang X, Wang Y, Rubin GM, Looger LL.

Nat Methods. 2015 Jun;12(6):568-76. doi: 10.1038/nmeth.3365. Epub 2015 Apr 27.

38.

Dynamics of Ionic Shifts in Cortical Spreading Depression.

Enger R, Tang W, Vindedal GF, Jensen V, Johannes Helm P, Sprengel R, Looger LL, Nagelhus EA.

Cereb Cortex. 2015 Nov;25(11):4469-76. doi: 10.1093/cercor/bhv054. Epub 2015 Apr 2.

39.

Stimulation-evoked Ca2+ signals in astrocytic processes at hippocampal CA3-CA1 synapses of adult mice are modulated by glutamate and ATP.

Tang W, Szokol K, Jensen V, Enger R, Trivedi CA, Hvalby Ø, Helm PJ, Looger LL, Sprengel R, Nagelhus EA.

J Neurosci. 2015 Feb 18;35(7):3016-21. doi: 10.1523/JNEUROSCI.3319-14.2015.

40.

Neural circuits. Labeling of active neural circuits in vivo with designed calcium integrators.

Fosque BF, Sun Y, Dana H, Yang CT, Ohyama T, Tadross MR, Patel R, Zlatic M, Kim DS, Ahrens MB, Jayaraman V, Looger LL, Schreiter ER.

Science. 2015 Feb 13;347(6223):755-60. doi: 10.1126/science.1260922.

41.

Fixation-resistant photoactivatable fluorescent proteins for CLEM.

Paez-Segala MG, Sun MG, Shtengel G, Viswanathan S, Baird MA, Macklin JJ, Patel R, Allen JR, Howe ES, Piszczek G, Hess HF, Davidson MW, Wang Y, Looger LL.

Nat Methods. 2015 Mar;12(3):215-8, 4 p following 218. doi: 10.1038/nmeth.3225. Epub 2015 Jan 12. Erratum in: Nat Methods. 2015 Jul;12(7):692.

42.

Thy1-GCaMP6 transgenic mice for neuronal population imaging in vivo.

Dana H, Chen TW, Hu A, Shields BC, Guo C, Looger LL, Kim DS, Svoboda K.

PLoS One. 2014 Sep 24;9(9):e108697. doi: 10.1371/journal.pone.0108697. eCollection 2014.

43.

Integrated action of pheromone signals in promoting courtship behavior in male mice.

Haga-Yamanaka S, Ma L, He J, Qiu Q, Lavis LD, Looger LL, Yu CR.

Elife. 2014 Jul 29;3:e03025. doi: 10.7554/eLife.03025.

44.

Mapping brain activity at scale with cluster computing.

Freeman J, Vladimirov N, Kawashima T, Mu Y, Sofroniew NJ, Bennett DV, Rosen J, Yang CT, Looger LL, Ahrens MB.

Nat Methods. 2014 Sep;11(9):941-50. doi: 10.1038/nmeth.3041. Epub 2014 Jul 27.

PMID:
25068736
45.

Light-sheet functional imaging in fictively behaving zebrafish.

Vladimirov N, Mu Y, Kawashima T, Bennett DV, Yang CT, Looger LL, Keller PJ, Freeman J, Ahrens MB.

Nat Methods. 2014 Sep;11(9):883-4. doi: 10.1038/nmeth.3040. Epub 2014 Jul 27. No abstract available.

PMID:
25068735
46.

Receptive field properties of bipolar cell axon terminals in direction-selective sublaminas of the mouse retina.

Chen M, Lee S, Park SJ, Looger LL, Zhou ZJ.

J Neurophysiol. 2014 Oct 15;112(8):1950-62. doi: 10.1152/jn.00283.2014. Epub 2014 Jul 16.

47.

Kainate receptors mediate signaling in both transient and sustained OFF bipolar cell pathways in mouse retina.

Borghuis BG, Looger LL, Tomita S, Demb JB.

J Neurosci. 2014 Apr 30;34(18):6128-39. doi: 10.1523/JNEUROSCI.4941-13.2014.

48.

Conditions and constraints for astrocyte calcium signaling in the hippocampal mossy fiber pathway.

Haustein MD, Kracun S, Lu XH, Shih T, Jackson-Weaver O, Tong X, Xu J, Yang XW, O'Dell TJ, Marvin JS, Ellisman MH, Bushong EA, Looger LL, Khakh BS.

Neuron. 2014 Apr 16;82(2):413-29. doi: 10.1016/j.neuron.2014.02.041.

49.

Excitatory synaptic inputs to mouse on-off direction-selective retinal ganglion cells lack direction tuning.

Park SJ, Kim IJ, Looger LL, Demb JB, Borghuis BG.

J Neurosci. 2014 Mar 12;34(11):3976-81. doi: 10.1523/JNEUROSCI.5017-13.2014.

50.

Combined protein- and nucleic acid-level effects of rs1143679 (R77H), a lupus-predisposing variant within ITGAM.

Maiti AK, Kim-Howard X, Motghare P, Pradhan V, Chua KH, Sun C, Arango-Guerrero MT, Ghosh K, Niewold TB, Harley JB, Anaya JM, Looger LL, Nath SK.

Hum Mol Genet. 2014 Aug 1;23(15):4161-76. doi: 10.1093/hmg/ddu106. Epub 2014 Mar 7.

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