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Items: 1 to 50 of 105

1.

A genetically encoded single-wavelength sensor for imaging cytosolic and cell surface ATP.

Lobas MA, Tao R, Nagai J, Kronschläger MT, Borden PM, Marvin JS, Looger LL, Khakh BS.

Nat Commun. 2019 Feb 12;10(1):711. doi: 10.1038/s41467-019-08441-5.

2.

Determining the pharmacokinetics of nicotinic drugs in the endoplasmic reticulum using biosensors.

Shivange AV, Borden PM, Muthusamy AK, Nichols AL, Bera K, Bao H, Bishara I, Jeon J, Mulcahy MJ, Cohen B, O'Riordan SL, Kim C, Dougherty DA, Chapman ER, Marvin J, Looger L, Lester HA.

J Gen Physiol. 2019 Feb 4. pii: jgp.201812201. doi: 10.1085/jgp.201812201. [Epub ahead of print]

PMID:
30718376
3.

Publisher Correction: Stability, affinity, and chromatic variants of the glutamate sensor iGluSnFR.

Marvin JS, Scholl B, Wilson DE, Podgorski K, Kazemipour A, Müller JA, Schoch S, Urra Quiroz FJ, Rebola N, Bao H, Little JP, Tkachuk AN, Cai E, Hantman AW, Wang SS, DePiero VJ, Borghuis BG, Chapman ER, Dietrich D, DiGregorio DA, Fitzpatrick D, Looger LL.

Nat Methods. 2019 Feb;16(2):206. doi: 10.1038/s41592-018-0300-z.

PMID:
30602783
4.

Distinct descending motor cortex pathways and their roles in movement.

Economo MN, Viswanathan S, Tasic B, Bas E, Winnubst J, Menon V, Graybuck LT, Nguyen TN, Smith KA, Yao Z, Wang L, Gerfen CR, Chandrashekar J, Zeng H, Looger LL, Svoboda K.

Nature. 2018 Nov;563(7729):79-84. doi: 10.1038/s41586-018-0642-9. Epub 2018 Oct 31.

PMID:
30382200
5.

Shared and distinct transcriptomic cell types across neocortical areas.

Tasic B, Yao Z, Graybuck LT, Smith KA, Nguyen TN, Bertagnolli D, Goldy J, Garren E, Economo MN, Viswanathan S, Penn O, Bakken T, Menon V, Miller J, Fong O, Hirokawa KE, Lathia K, Rimorin C, Tieu M, Larsen R, Casper T, Barkan E, Kroll M, Parry S, Shapovalova NV, Hirschstein D, Pendergraft J, Sullivan HA, Kim TK, Szafer A, Dee N, Groblewski P, Wickersham I, Cetin A, Harris JA, Levi BP, Sunkin SM, Madisen L, Daigle TL, Looger L, Bernard A, Phillips J, Lein E, Hawrylycz M, Svoboda K, Jones AR, Koch C, Zeng H.

Nature. 2018 Nov;563(7729):72-78. doi: 10.1038/s41586-018-0654-5. Epub 2018 Oct 31.

PMID:
30382198
6.

Stability, affinity, and chromatic variants of the glutamate sensor iGluSnFR.

Marvin JS, Scholl B, Wilson DE, Podgorski K, Kazemipour A, Müller JA, Schoch S, Quiroz FJU, Rebola N, Bao H, Little JP, Tkachuk AN, Cai E, Hantman AW, Wang SS, DePiero VJ, Borghuis BG, Chapman ER, Dietrich D, DiGregorio DA, Fitzpatrick D, Looger LL.

Nat Methods. 2018 Nov;15(11):936-939. doi: 10.1038/s41592-018-0171-3. Epub 2018 Oct 30. Erratum in: Nat Methods. 2019 Feb;16(2):206.

PMID:
30377363
7.

Aberrant Calcium Signaling in Astrocytes Inhibits Neuronal Excitability in a Human Down Syndrome Stem Cell Model.

Mizuno GO, Wang Y, Shi G, Wang Y, Sun J, Papadopoulos S, Broussard GJ, Unger EK, Deng W, Weick J, Bhattacharyya A, Chen CY, Yu G, Looger LL, Tian L.

Cell Rep. 2018 Jul 10;24(2):355-365. doi: 10.1016/j.celrep.2018.06.033.

8.

Extant fold-switching proteins are widespread.

Porter LL, Looger LL.

Proc Natl Acad Sci U S A. 2018 Jun 5;115(23):5968-5973. doi: 10.1073/pnas.1800168115. Epub 2018 May 21.

9.

Functional Imaging and Optogenetics in Drosophila.

Simpson JH, Looger LL.

Genetics. 2018 Apr;208(4):1291-1309. doi: 10.1534/genetics.117.300228. Review.

10.

Neural signatures of dynamic stimulus selection in Drosophila.

Sun Y, Nern A, Franconville R, Dana H, Schreiter ER, Looger LL, Svoboda K, Kim DS, Hermundstad AM, Jayaraman V.

Nat Neurosci. 2017 Aug;20(8):1104-1113. doi: 10.1038/nn.4581. Epub 2017 Jun 12.

PMID:
28604683
11.

Diverse protocols for correlative super-resolution fluorescence imaging and electron microscopy of chemically fixed samples.

Kopek BG, Paez-Segala MG, Shtengel G, Sochacki KA, Sun MG, Wang Y, Xu CS, van Engelenburg SB, Taraska JW, Looger LL, Hess HF.

Nat Protoc. 2017 May;12(5):916-946. doi: 10.1038/nprot.2017.017. Epub 2017 Apr 6.

12.

Confirmation of five novel susceptibility loci for systemic lupus erythematosus (SLE) and integrated network analysis of 82 SLE susceptibility loci.

Molineros JE, Yang W, Zhou XJ, Sun C, Okada Y, Zhang H, Heng Chua K, Lau YL, Kochi Y, Suzuki A, Yamamoto K, Ma J, Bang SY, Lee HS, Kim K, Bae SC, Zhang H, Shen N, Looger LL, Nath SK.

Hum Mol Genet. 2017 Mar 15;26(6):1205-1216. doi: 10.1093/hmg/ddx026.

13.

All-optical functional synaptic connectivity mapping in acute brain slices using the calcium integrator CaMPARI.

Zolnik TA, Sha F, Johenning FW, Schreiter ER, Looger LL, Larkum ME, Sachdev RN.

J Physiol. 2017 Mar 1;595(5):1465-1477. doi: 10.1113/JP273116. Epub 2016 Dec 14.

14.

A Designer AAV Variant Permits Efficient Retrograde Access to Projection Neurons.

Tervo DG, Hwang BY, Viswanathan S, Gaj T, Lavzin M, Ritola KD, Lindo S, Michael S, Kuleshova E, Ojala D, Huang CC, Gerfen CR, Schiller J, Dudman JT, Hantman AW, Looger LL, Schaffer DV, Karpova AY.

Neuron. 2016 Oct 19;92(2):372-382. doi: 10.1016/j.neuron.2016.09.021. Epub 2016 Oct 6.

15.
16.

A timecourse analysis of systemic and gonadal effects of temperature on sexual development of the red-eared slider turtle Trachemys scripta elegans.

Czerwinski M, Natarajan A, Barske L, Looger LL, Capel B.

Dev Biol. 2016 Dec 1;420(1):166-177. doi: 10.1016/j.ydbio.2016.09.018. Epub 2016 Sep 23.

17.

Molecularly Defined Subplate Neurons Project Both to Thalamocortical Recipient Layers and Thalamus.

Viswanathan S, Sheikh A, Looger LL, Kanold PO.

Cereb Cortex. 2017 Oct 1;27(10):4759-4768. doi: 10.1093/cercor/bhw271.

18.

Falling apart.

Marvin JS, Looger LL.

Elife. 2016 Jun 27;5. pii: e18203. doi: 10.7554/eLife.18203.

19.

Real-time quantification of single RNA translation dynamics in living cells.

Morisaki T, Lyon K, DeLuca KF, DeLuca JG, English BP, Zhang Z, Lavis LD, Grimm JB, Viswanathan S, Looger LL, Lionnet T, Stasevich TJ.

Science. 2016 Jun 17;352(6292):1425-9. doi: 10.1126/science.aaf0899. Epub 2016 May 5.

20.

GFP-Aequorin Protein Sensor for Ex Vivo and In Vivo Imaging of Ca(2+) Dynamics in High-Ca(2+) Organelles.

Navas-Navarro P, Rojo-Ruiz J, Rodriguez-Prados M, Ganfornina MD, Looger LL, Alonso MT, García-Sancho J.

Cell Chem Biol. 2016 Jun 23;23(6):738-45. doi: 10.1016/j.chembiol.2016.05.010. Epub 2016 Jun 9.

21.

Dysfunctional Calcium and Glutamate Signaling in Striatal Astrocytes from Huntington's Disease Model Mice.

Jiang R, Diaz-Castro B, Looger LL, Khakh BS.

J Neurosci. 2016 Mar 23;36(12):3453-70. doi: 10.1523/JNEUROSCI.3693-15.2016.

22.

Sensitive red protein calcium indicators for imaging neural activity.

Dana H, Mohar B, Sun Y, Narayan S, Gordus A, Hasseman JP, Tsegaye G, Holt GT, Hu A, Walpita D, Patel R, Macklin JJ, Bargmann CI, Ahrens MB, Schreiter ER, Jayaraman V, Looger LL, Svoboda K, Kim DS.

Elife. 2016 Mar 24;5. pii: e12727. doi: 10.7554/eLife.12727.

23.

High-density genotyping of immune-related loci identifies new SLE risk variants in individuals with Asian ancestry.

Sun C, Molineros JE, Looger LL, Zhou XJ, Kim K, Okada Y, Ma J, Qi YY, Kim-Howard X, Motghare P, Bhattarai K, Adler A, Bang SY, Lee HS, Kim TH, Kang YM, Suh CH, Chung WT, Park YB, Choe JY, Shim SC, Kochi Y, Suzuki A, Kubo M, Sumida T, Yamamoto K, Lee SS, Kim YJ, Han BG, Dozmorov M, Kaufman KM, Wren JD, Harley JB, Shen N, Chua KH, Zhang H, Bae SC, Nath SK.

Nat Genet. 2016 Mar;48(3):323-30. doi: 10.1038/ng.3496. Epub 2016 Jan 25.

24.

Direct In Vivo Manipulation and Imaging of Calcium Transients in Neutrophils Identify a Critical Role for Leading-Edge Calcium Flux.

Beerman RW, Matty MA, Au GG, Looger LL, Choudhury KR, Keller PJ, Tobin DM.

Cell Rep. 2015 Dec 15;13(10):2107-17. doi: 10.1016/j.celrep.2015.11.010. Epub 2015 Dec 7.

25.

A Low Affinity GCaMP3 Variant (GCaMPer) for Imaging the Endoplasmic Reticulum Calcium Store.

Henderson MJ, Baldwin HA, Werley CA, Boccardo S, Whitaker LR, Yan X, Holt GT, Schreiter ER, Looger LL, Cohen AE, Kim DS, Harvey BK.

PLoS One. 2015 Oct 9;10(10):e0139273. doi: 10.1371/journal.pone.0139273. eCollection 2015.

26.

Green-to-Red Photoconversion of GCaMP.

Ai M, Mills H, Kanai M, Lai J, Deng J, Schreiter E, Looger L, Neubert T, Suh G.

PLoS One. 2015 Sep 18;10(9):e0138127. doi: 10.1371/journal.pone.0138127. eCollection 2015.

27.

High-performance probes for light and electron microscopy.

Viswanathan S, Williams ME, Bloss EB, Stasevich TJ, Speer CM, Nern A, Pfeiffer BD, Hooks BM, Li WP, English BP, Tian T, Henry GL, Macklin JJ, Patel R, Gerfen CR, Zhuang X, Wang Y, Rubin GM, Looger LL.

Nat Methods. 2015 Jun;12(6):568-76. doi: 10.1038/nmeth.3365. Epub 2015 Apr 27.

28.

Dynamics of Ionic Shifts in Cortical Spreading Depression.

Enger R, Tang W, Vindedal GF, Jensen V, Johannes Helm P, Sprengel R, Looger LL, Nagelhus EA.

Cereb Cortex. 2015 Nov;25(11):4469-76. doi: 10.1093/cercor/bhv054. Epub 2015 Apr 2.

29.

Stimulation-evoked Ca2+ signals in astrocytic processes at hippocampal CA3-CA1 synapses of adult mice are modulated by glutamate and ATP.

Tang W, Szokol K, Jensen V, Enger R, Trivedi CA, Hvalby Ø, Helm PJ, Looger LL, Sprengel R, Nagelhus EA.

J Neurosci. 2015 Feb 18;35(7):3016-21. doi: 10.1523/JNEUROSCI.3319-14.2015.

30.

Neural circuits. Labeling of active neural circuits in vivo with designed calcium integrators.

Fosque BF, Sun Y, Dana H, Yang CT, Ohyama T, Tadross MR, Patel R, Zlatic M, Kim DS, Ahrens MB, Jayaraman V, Looger LL, Schreiter ER.

Science. 2015 Feb 13;347(6223):755-60. doi: 10.1126/science.1260922.

31.

Fixation-resistant photoactivatable fluorescent proteins for CLEM.

Paez-Segala MG, Sun MG, Shtengel G, Viswanathan S, Baird MA, Macklin JJ, Patel R, Allen JR, Howe ES, Piszczek G, Hess HF, Davidson MW, Wang Y, Looger LL.

Nat Methods. 2015 Mar;12(3):215-8, 4 p following 218. doi: 10.1038/nmeth.3225. Epub 2015 Jan 12. Erratum in: Nat Methods. 2015 Jul;12(7):692.

32.

Thy1-GCaMP6 transgenic mice for neuronal population imaging in vivo.

Dana H, Chen TW, Hu A, Shields BC, Guo C, Looger LL, Kim DS, Svoboda K.

PLoS One. 2014 Sep 24;9(9):e108697. doi: 10.1371/journal.pone.0108697. eCollection 2014.

33.

Integrated action of pheromone signals in promoting courtship behavior in male mice.

Haga-Yamanaka S, Ma L, He J, Qiu Q, Lavis LD, Looger LL, Yu CR.

Elife. 2014 Jul 29;3:e03025. doi: 10.7554/eLife.03025.

34.

Mapping brain activity at scale with cluster computing.

Freeman J, Vladimirov N, Kawashima T, Mu Y, Sofroniew NJ, Bennett DV, Rosen J, Yang CT, Looger LL, Ahrens MB.

Nat Methods. 2014 Sep;11(9):941-50. doi: 10.1038/nmeth.3041. Epub 2014 Jul 27.

PMID:
25068736
35.

Light-sheet functional imaging in fictively behaving zebrafish.

Vladimirov N, Mu Y, Kawashima T, Bennett DV, Yang CT, Looger LL, Keller PJ, Freeman J, Ahrens MB.

Nat Methods. 2014 Sep;11(9):883-4. doi: 10.1038/nmeth.3040. Epub 2014 Jul 27. No abstract available.

PMID:
25068735
36.

Receptive field properties of bipolar cell axon terminals in direction-selective sublaminas of the mouse retina.

Chen M, Lee S, Park SJ, Looger LL, Zhou ZJ.

J Neurophysiol. 2014 Oct 15;112(8):1950-62. doi: 10.1152/jn.00283.2014. Epub 2014 Jul 16.

37.

Kainate receptors mediate signaling in both transient and sustained OFF bipolar cell pathways in mouse retina.

Borghuis BG, Looger LL, Tomita S, Demb JB.

J Neurosci. 2014 Apr 30;34(18):6128-39. doi: 10.1523/JNEUROSCI.4941-13.2014.

38.

Conditions and constraints for astrocyte calcium signaling in the hippocampal mossy fiber pathway.

Haustein MD, Kracun S, Lu XH, Shih T, Jackson-Weaver O, Tong X, Xu J, Yang XW, O'Dell TJ, Marvin JS, Ellisman MH, Bushong EA, Looger LL, Khakh BS.

Neuron. 2014 Apr 16;82(2):413-29. doi: 10.1016/j.neuron.2014.02.041.

39.

Excitatory synaptic inputs to mouse on-off direction-selective retinal ganglion cells lack direction tuning.

Park SJ, Kim IJ, Looger LL, Demb JB, Borghuis BG.

J Neurosci. 2014 Mar 12;34(11):3976-81. doi: 10.1523/JNEUROSCI.5017-13.2014.

40.

Combined protein- and nucleic acid-level effects of rs1143679 (R77H), a lupus-predisposing variant within ITGAM.

Maiti AK, Kim-Howard X, Motghare P, Pradhan V, Chua KH, Sun C, Arango-Guerrero MT, Ghosh K, Niewold TB, Harley JB, Anaya JM, Looger LL, Nath SK.

Hum Mol Genet. 2014 Aug 1;23(15):4161-76. doi: 10.1093/hmg/ddu106. Epub 2014 Mar 7.

41.

Allelic heterogeneity in NCF2 associated with systemic lupus erythematosus (SLE) susceptibility across four ethnic populations.

Kim-Howard X, Sun C, Molineros JE, Maiti AK, Chandru H, Adler A, Wiley GB, Kaufman KM, Kottyan L, Guthridge JM, Rasmussen A, Kelly J, Sánchez E, Raj P, Li QZ, Bang SY, Lee HS, Kim TH, Kang YM, Suh CH, Chung WT, Park YB, Choe JY, Shim SC, Lee SS, Han BG, Olsen NJ, Karp DR, Moser K, Pons-Estel BA, Wakeland EK, James JA, Harley JB, Bae SC, Gaffney PM, Alarcón-Riquelme M; GENLES, Looger LL, Nath SK.

Hum Mol Genet. 2014 Mar 15;23(6):1656-68. doi: 10.1093/hmg/ddt532. Epub 2013 Oct 26.

42.

A neuron-based screening platform for optimizing genetically-encoded calcium indicators.

Wardill TJ, Chen TW, Schreiter ER, Hasseman JP, Tsegaye G, Fosque BF, Behnam R, Shields BC, Ramirez M, Kimmel BE, Kerr RA, Jayaraman V, Looger LL, Svoboda K, Kim DS.

PLoS One. 2013 Oct 14;8(10):e77728. doi: 10.1371/journal.pone.0077728. eCollection 2013.

43.

Fine time course expression analysis identifies cascades of activation and repression and maps a putative regulator of mammalian sex determination.

Munger SC, Natarajan A, Looger LL, Ohler U, Capel B.

PLoS Genet. 2013;9(7):e1003630. doi: 10.1371/journal.pgen.1003630. Epub 2013 Jul 11.

44.

Ultrasensitive fluorescent proteins for imaging neuronal activity.

Chen TW, Wardill TJ, Sun Y, Pulver SR, Renninger SL, Baohan A, Schreiter ER, Kerr RA, Orger MB, Jayaraman V, Looger LL, Svoboda K, Kim DS.

Nature. 2013 Jul 18;499(7458):295-300. doi: 10.1038/nature12354.

45.

Two-photon imaging of nonlinear glutamate release dynamics at bipolar cell synapses in the mouse retina.

Borghuis BG, Marvin JS, Looger LL, Demb JB.

J Neurosci. 2013 Jul 3;33(27):10972-85. doi: 10.1523/JNEUROSCI.1241-13.2013.

46.

β-synuclein aggregates and induces neurodegeneration in dopaminergic neurons.

Taschenberger G, Toloe J, Tereshchenko J, Akerboom J, Wales P, Benz R, Becker S, Outeiro TF, Looger LL, Bähr M, Zweckstetter M, Kügler S.

Ann Neurol. 2013 Jul;74(1):109-18. doi: 10.1002/ana.23905. Epub 2013 Aug 6.

PMID:
23536356
47.

Nanotools for neuroscience and brain activity mapping.

Alivisatos AP, Andrews AM, Boyden ES, Chun M, Church GM, Deisseroth K, Donoghue JP, Fraser SE, Lippincott-Schwartz J, Looger LL, Masmanidis S, McEuen PL, Nurmikko AV, Park H, Peterka DS, Reid C, Roukes ML, Scherer A, Schnitzer M, Sejnowski TJ, Shepard KL, Tsao D, Turrigiano G, Weiss PS, Xu C, Yuste R, Zhuang X.

ACS Nano. 2013 Mar 26;7(3):1850-66. doi: 10.1021/nn4012847. Epub 2013 Mar 20. Review.

48.

The Author File: Loren L. Looger. Interview by Vivien Marx.

Looger LL.

Nat Methods. 2013 Feb;10(2):93. No abstract available.

PMID:
23479797
49.

Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics.

Akerboom J, Carreras Calderón N, Tian L, Wabnig S, Prigge M, Tolö J, Gordus A, Orger MB, Severi KE, Macklin JJ, Patel R, Pulver SR, Wardill TJ, Fischer E, Schüler C, Chen TW, Sarkisyan KS, Marvin JS, Bargmann CI, Kim DS, Kügler S, Lagnado L, Hegemann P, Gottschalk A, Schreiter ER, Looger LL.

Front Mol Neurosci. 2013 Mar 4;6:2. doi: 10.3389/fnmol.2013.00002. eCollection 2013.

50.

Admixture mapping in lupus identifies multiple functional variants within IFIH1 associated with apoptosis, inflammation, and autoantibody production.

Molineros JE, Maiti AK, Sun C, Looger LL, Han S, Kim-Howard X, Glenn S, Adler A, Kelly JA, Niewold TB, Gilkeson GS, Brown EE, Alarcón GS, Edberg JC, Petri M, Ramsey-Goldman R, Reveille JD, Vilá LM, Freedman BI, Tsao BP, Criswell LA, Jacob CO, Moore JH, Vyse TJ, Langefeld CL, Guthridge JM, Gaffney PM, Moser KL, Scofield RH, Alarcón-Riquelme ME; BIOLUPUS Network, Williams SM, Merrill JT, James JA, Kaufman KM, Kimberly RP, Harley JB, Nath SK.

PLoS Genet. 2013;9(2):e1003222. doi: 10.1371/journal.pgen.1003222. Epub 2013 Feb 18.

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