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Items: 34


Complete Genome Sequence of Campylobacter jejuni Strain NADC 20827, Isolated from Commercial Turkeys.

Nielsen DW, Maki JJ, Looft T, Ricker N, Sylte MJ.

Microbiol Resour Announc. 2020 Jan 2;9(1). pii: e01403-19. doi: 10.1128/MRA.01403-19.


Cattle intestinal microbiota shifts following Escherichia coli O157:H7 vaccination and colonization

Mir RA, Schaut RG, Allen HK, Looft T, Loving CL, Kudva IT, Sharma VK.

PLoS One. 2019 Dec 5;14(12):e0226099. doi: 10.1371/journal.pone.0226099. eCollection 2019. Erratum in: PLoS One. 2019 Dec 30;14(12):e0227403.


The Microbial Pecking Order: Utilization of Intestinal Microbiota for Poultry Health.

Maki JJ, Klima CL, Sylte MJ, Looft T.

Microorganisms. 2019 Sep 20;7(10). pii: E376. doi: 10.3390/microorganisms7100376. Review.


Horizontal Gene Transfer and Acquired Antibiotic Resistance in Salmonella enterica Serovar Heidelberg following In Vitro Incubation in Broiler Ceca.

Oladeinde A, Cook K, Lakin SM, Woyda R, Abdo Z, Looft T, Herrington K, Zock G, Lawrence JP, Thomas JC 4th, Beaudry MS, Glenn T.

Appl Environ Microbiol. 2019 Oct 30;85(22). pii: e01903-19. doi: 10.1128/AEM.01903-19. Print 2019 Nov 15.


In-feed bacitracin methylene disalicylate modulates the turkey microbiota and metabolome in a dose-dependent manner.

Johnson TA, Sylte MJ, Looft T.

Sci Rep. 2019 Jun 3;9(1):8212. doi: 10.1038/s41598-019-44338-5.


Intestinal colonization and acute immune response in commercial turkeys following inoculation with Campylobacter jejuni constructs encoding antibiotic-resistance markers.

Sylte MJ, Johnson TA, Meyer EL, Inbody MH, Trachsel J, Looft T, Susta L, Wu Z, Zhang Q.

Vet Immunol Immunopathol. 2019 Apr;210:6-14. doi: 10.1016/j.vetimm.2019.02.003. Epub 2019 Mar 1.


Cross-protective Salmonella vaccine reduces cecal and splenic colonization of multidrug-resistant Salmonella enterica serovar Heidelberg.

Bearson SMD, Bearson BL, Sylte MJ, Looft T, Kogut MH, Cai G.

Vaccine. 2019 Feb 28;37(10):1255-1259. doi: 10.1016/j.vaccine.2018.12.058. Epub 2019 Feb 1.


Avian Intestinal Mucus Modulates Campylobacter jejuni Gene Expression in a Host-Specific Manner.

Looft T, Cai G, Choudhury B, Lai LX, Lippolis JD, Reinhardt TA, Sylte MJ, Casey TA.

Front Microbiol. 2019 Jan 7;9:3215. doi: 10.3389/fmicb.2018.03215. eCollection 2018.


Complete Genome Sequence of Megasphaera stantonii AJH120T, Isolated from a Chicken Cecum.

Maki JJ, Looft T.

Microbiol Resour Announc. 2018 Nov 8;7(18). pii: e01148-18. doi: 10.1128/MRA.01148-18. eCollection 2018 Nov.


Nanoparticle microarray for high-throughput microbiome metabolomics using matrix-assisted laser desorption ionization mass spectrometry.

Hansen RL, DueƱas ME, Looft T, Lee YJ.

Anal Bioanal Chem. 2019 Jan;411(1):147-156. doi: 10.1007/s00216-018-1436-5. Epub 2018 Oct 30.


Megasphaera stantonii sp. nov., a butyrate-producing bacterium isolated from the cecum of a healthy chicken.

Maki JJ, Looft T.

Int J Syst Evol Microbiol. 2018 Nov;68(11):3409-3415. doi: 10.1099/ijsem.0.002991. Epub 2018 Oct 3.


Bulk soil bacterial community structure and function respond to long-term organic and conventional agricultural management.

Bakker MG, Looft T, Alt DP, Delate K, Cambardella CA.

Can J Microbiol. 2018 Dec;64(12):901-914. doi: 10.1139/cjm-2018-0134. Epub 2018 Jul 30.


Evaluation of different Campylobacter jejuni isolates to colonize the intestinal tract of commercial turkey poults and selective media for enumeration.

Sylte MJ, Inbody MH, Johnson TA, Looft T, Line JE.

Poult Sci. 2018 May 1;97(5):1689-1698. doi: 10.3382/ps/pex384.


Characterization of a Multidrug-Resistant Salmonella enterica Serovar Heidelberg Outbreak Strain in Commercial Turkeys: Colonization, Transmission, and Host Transcriptional Response.

Bearson BL, Bearson SMD, Looft T, Cai G, Shippy DC.

Front Vet Sci. 2017 Sep 25;4:156. doi: 10.3389/fvets.2017.00156. eCollection 2017.


The In-Feed Antibiotic Carbadox Induces Phage Gene Transcription in the Swine Gut Microbiome.

Johnson TA, Looft T, Severin AJ, Bayles DO, Nasko DJ, Wommack KE, Howe A, Allen HK.

mBio. 2017 Aug 8;8(4). pii: e00709-17. doi: 10.1128/mBio.00709-17.


Evaluation of disinfectants and antiseptics to eliminate bacteria from the surface of turkey eggs and hatch gnotobiotic poults.

Sylte MJ, Chandra LC, Looft T.

Poult Sci. 2017 Jul 1;96(7):2412-2420. doi: 10.3382/ps/pex022.


Fermentation products as feed additives mitigate some ill-effects of heat stress in pigs.

Kumar S, Bass BE, Bandrick M, Loving CL, Brockmeier SL, Looft T, Trachsel J, Madson DM, Thomas M, Casey TA, Frank JW, Stanton TB, Allen HK.

J Anim Sci. 2017 Jan;95(1):279-290. doi: 10.2527/jas.2016.0662.


Complete Genome Sequences of Curli-Negative and Curli-Positive Isolates of Foodborne Escherichia coli O157:H7 Strain 86-24.

Sharma VK, Bayles DO, Alt DP, Looft T.

Genome Announc. 2016 Dec 15;4(6). pii: e01323-16. doi: 10.1128/genomeA.01323-16.


Differential Gene Expression of Three Mastitis-Causing Escherichia coli Strains Grown under Planktonic, Swimming, and Swarming Culture Conditions.

Lippolis JD, Brunelle BW, Reinhardt TA, Sacco RE, Thacker TC, Looft TP, Casey TA.

mSystems. 2016 Aug 9;1(4). pii: e00064-16. eCollection 2016 Jul-Aug.


Function and Phylogeny of Bacterial Butyryl Coenzyme A:Acetate Transferases and Their Diversity in the Proximal Colon of Swine.

Trachsel J, Bayles DO, Looft T, Levine UY, Allen HK.

Appl Environ Microbiol. 2016 Oct 27;82(22):6788-6798. Print 2016 Nov 15.


Pipeline for amplifying and analyzing amplicons of the V1-V3 region of the 16S rRNA gene.

Allen HK, Bayles DO, Looft T, Trachsel J, Bass BE, Alt DP, Bearson SM, Nicholson T, Casey TA.

BMC Res Notes. 2016 Aug 2;9:380. doi: 10.1186/s13104-016-2172-6.


Clusters of Antibiotic Resistance Genes Enriched Together Stay Together in Swine Agriculture.

Johnson TA, Stedtfeld RD, Wang Q, Cole JR, Hashsham SA, Looft T, Zhu YG, Tiedje JM.

mBio. 2016 Apr 12;7(2):e02214-15. doi: 10.1128/mBio.02214-15.


Complete Genome Sequence of Coriobacteriaceae Strain 68-1-3, a Novel Mucus-Degrading Isolate from the Swine Intestinal Tract.

Looft T, Bayles DO, Alt DP, Stanton TB.

Genome Announc. 2015 Oct 8;3(5). pii: e01143-15. doi: 10.1128/genomeA.01143-15.


Carbadox has both temporary and lasting effects on the swine gut microbiota.

Looft T, Allen HK, Casey TA, Alt DP, Stanton TB.

Front Microbiol. 2014 Jun 10;5:276. doi: 10.3389/fmicb.2014.00276. eCollection 2014.


Finding alternatives to antibiotics.

Allen HK, Trachsel J, Looft T, Casey TA.

Ann N Y Acad Sci. 2014 Sep;1323:91-100. doi: 10.1111/nyas.12468. Epub 2014 Jun 20. Review.


Bacteria, phages and pigs: the effects of in-feed antibiotics on the microbiome at different gut locations.

Looft T, Allen HK, Cantarel BL, Levine UY, Bayles DO, Alt DP, Henrissat B, Stanton TB.

ISME J. 2014 Aug;8(8):1566-76. doi: 10.1038/ismej.2014.12. Epub 2014 Feb 13.


Butyrate-producing bacteria, including mucin degraders, from the swine intestinal tract.

Levine UY, Looft T, Allen HK, Stanton TB.

Appl Environ Microbiol. 2013 Jun;79(12):3879-81. doi: 10.1128/AEM.00589-13. Epub 2013 Apr 12.


Profiling the gastrointestinal microbiota in response to Salmonella: low versus high Salmonella shedding in the natural porcine host.

Bearson SM, Allen HK, Bearson BL, Looft T, Brunelle BW, Kich JD, Tuggle CK, Bayles DO, Alt D, Levine UY, Stanton TB.

Infect Genet Evol. 2013 Jun;16:330-40. doi: 10.1016/j.meegid.2013.03.022. Epub 2013 Mar 25.


Treatment, promotion, commotion: antibiotic alternatives in food-producing animals.

Allen HK, Levine UY, Looft T, Bandrick M, Casey TA.

Trends Microbiol. 2013 Mar;21(3):114-9. doi: 10.1016/j.tim.2012.11.001. Review.


Cloacibacillus porcorum sp. nov., a mucin-degrading bacterium from the swine intestinal tract and emended description of the genus Cloacibacillus.

Looft T, Levine UY, Stanton TB.

Int J Syst Evol Microbiol. 2013 Jun;63(Pt 6):1960-6. doi: 10.1099/ijs.0.044719-0. Epub 2012 Oct 5.


Collateral effects of antibiotics on mammalian gut microbiomes.

Looft T, Allen HK.

Gut Microbes. 2012 Sep-Oct;3(5):463-7. Epub 2012 Jul 24. Review.


In-feed antibiotic effects on the swine intestinal microbiome.

Looft T, Johnson TA, Allen HK, Bayles DO, Alt DP, Stedtfeld RD, Sul WJ, Stedtfeld TM, Chai B, Cole JR, Hashsham SA, Tiedje JM, Stanton TB.

Proc Natl Acad Sci U S A. 2012 Jan 31;109(5):1691-6. doi: 10.1073/pnas.1120238109. Epub 2012 Jan 17.


Antibiotics in feed induce prophages in swine fecal microbiomes.

Allen HK, Looft T, Bayles DO, Humphrey S, Levine UY, Alt D, Stanton TB.

mBio. 2011 Nov 29;2(6). pii: e00260-11. doi: 10.1128/mBio.00260-11. Print 2011.

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