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Items: 1 to 50 of 71

1.

Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues.

Meehan CJ, Goig GA, Kohl TA, Verboven L, Dippenaar A, Ezewudo M, Farhat MR, Guthrie JL, Laukens K, Miotto P, Ofori-Anyinam B, Dreyer V, Supply P, Suresh A, Utpatel C, van Soolingen D, Zhou Y, Ashton PM, Brites D, Cabibbe AM, de Jong BC, de Vos M, Menardo F, Gagneux S, Gao Q, Heupink TH, Liu Q, Loiseau C, Rigouts L, Rodwell TC, Tagliani E, Walker TM, Warren RM, Zhao Y, Zignol M, Schito M, Gardy J, Cirillo DM, Niemann S, Comas I, Van Rie A.

Nat Rev Microbiol. 2019 Jun 17. doi: 10.1038/s41579-019-0214-5. [Epub ahead of print] Review.

PMID:
31209399
2.

[Digital applicator by 3D printing in contact brachytherapy].

Lecornu M, Silva M, Barraux V, Stefan D, Kao W, Thariat J, Loiseau C.

Cancer Radiother. 2019 Jul;23(4):328-333. doi: 10.1016/j.canrad.2019.03.008. Epub 2019 May 30. French.

PMID:
31153769
3.

Impact of Leptospermone, a Natural β-Triketone Herbicide, on the Fungal Composition and Diversity of Two Arable Soils.

Mallet C, Romdhane S, Loiseau C, Béguet J, Martin-Laurent F, Calvayrac C, Barthelmebs L.

Front Microbiol. 2019 May 10;10:1024. doi: 10.3389/fmicb.2019.01024. eCollection 2019.

4.

Transition bias influences the evolution of antibiotic resistance in Mycobacterium tuberculosis.

Payne JL, Menardo F, Trauner A, Borrell S, Gygli SM, Loiseau C, Gagneux S, Hall AR.

PLoS Biol. 2019 May 13;17(5):e3000265. doi: 10.1371/journal.pbio.3000265. eCollection 2019 May.

5.

Revised Interpretation of the Hain Lifescience GenoType MTBC To Differentiate Mycobacterium canettii and Members of the Mycobacterium tuberculosis Complex.

Loiseau C, Brites D, Moser I, Coll F, Pourcel C, Robbe-Austerman S, Escuyer V, Musser KA, Peacock SJ, Feuerriegel S, Kohl TA, Niemann S, Gagneux S, Köser CU.

Antimicrob Agents Chemother. 2019 May 24;63(6). pii: e00159-19. doi: 10.1128/AAC.00159-19. Print 2019 Jun.

6.

Reference set of Mycobacterium tuberculosis clinical strains: A tool for research and product development.

Borrell S, Trauner A, Brites D, Rigouts L, Loiseau C, Coscolla M, Niemann S, De Jong B, Yeboah-Manu D, Kato-Maeda M, Feldmann J, Reinhard M, Beisel C, Gagneux S.

PLoS One. 2019 Mar 25;14(3):e0214088. doi: 10.1371/journal.pone.0214088. eCollection 2019.

7.

Increase of CXCR3+ T cells impairs Th17 cells recruitment in the small intestine mucosa through IFN-γ and IL-18 during treated HIV-1 infection.

Loiseau C, Requena M, Nayrac M, Mavigner M, Cazabat M, Iscache AL, Carrere N, Suc B, Alric L, Izopet J, Delobel P.

J Infect Dis. 2019 Mar 18. pii: jiz123. doi: 10.1093/infdis/jiz123. [Epub ahead of print]

PMID:
30880342
8.

Human challenge models: tools to accelerate the development of malaria vaccines.

Cooper MM, Loiseau C, McCarthy JS, Doolan DL.

Expert Rev Vaccines. 2019 Mar;18(3):241-251. doi: 10.1080/14760584.2019.1580577. Epub 2019 Feb 27. Review.

PMID:
30732492
9.

Whole-Genome Sequencing for Drug Resistance Profile Prediction in Mycobacterium tuberculosis.

Gygli SM, Keller PM, Ballif M, Blöchliger N, Hömke R, Reinhard M, Loiseau C, Ritter C, Sander P, Borrell S, Collantes Loo J, Avihingsanon A, Gnokoro J, Yotebieng M, Egger M, Gagneux S, Böttger EC.

Antimicrob Agents Chemother. 2019 Mar 27;63(4). pii: e02175-18. doi: 10.1128/AAC.02175-18. Print 2019 Apr.

10.

A New Phylogenetic Framework for the Animal-Adapted Mycobacterium tuberculosis Complex.

Brites D, Loiseau C, Menardo F, Borrell S, Boniotti MB, Warren R, Dippenaar A, Parsons SDC, Beisel C, Behr MA, Fyfe JA, Coscolla M, Gagneux S.

Front Microbiol. 2018 Nov 27;9:2820. doi: 10.3389/fmicb.2018.02820. eCollection 2018.

11.

Highlighting the Potency of Biosurfactants Produced by Pseudomonas Strains as Anti-Legionella Agents.

Loiseau C, Portier E, Corre MH, Schlusselhuber M, Depayras S, Berjeaud JM, Verdon J.

Biomed Res Int. 2018 Oct 22;2018:8194368. doi: 10.1155/2018/8194368. eCollection 2018.

12.

Comparative genomics of Mycobacterium africanum Lineage 5 and Lineage 6 from Ghana suggests distinct ecological niches.

Otchere ID, Coscollá M, Sánchez-Busó L, Asante-Poku A, Brites D, Loiseau C, Meehan C, Osei-Wusu S, Forson A, Laryea C, Yahayah AI, Baddoo A, Ansa GA, Aboagye SY, Asare P, Borrell S, Gehre F, Beckert P, Kohl TA, N'dira S, Beisel C, Antonio M, Niemann S, de Jong BC, Parkhill J, Harris SR, Gagneux S, Yeboah-Manu D.

Sci Rep. 2018 Jul 26;8(1):11269. doi: 10.1038/s41598-018-29620-2.

13.

Home spirometry in bronchiolitis obliterans after allogeneic haematopoietic cell transplant.

Loiseau C, Lemonnier F, Randrianarivelo O, Itzykson R, Nguyen S, Becquemin MH, Tcherakian C, Uzunov M, Catherinot E, Rivaud E, Salvator H, Devillier P, Sutton L, Vernant JP, Couderc LJ, Dhédin N.

Eur Respir J. 2018 Jul 19;52(1). pii: 1702328. doi: 10.1183/13993003.02328-2017. Print 2018 Jul. No abstract available.

PMID:
29794130
14.

Treemmer: a tool to reduce large phylogenetic datasets with minimal loss of diversity.

Menardo F, Loiseau C, Brites D, Coscolla M, Gygli SM, Rutaihwa LK, Trauner A, Beisel C, Borrell S, Gagneux S.

BMC Bioinformatics. 2018 May 2;19(1):164. doi: 10.1186/s12859-018-2164-8.

15.

Phylogenomics and antimicrobial resistance of the leprosy bacillus Mycobacterium leprae.

Benjak A, Avanzi C, Singh P, Loiseau C, Girma S, Busso P, Fontes ANB, Miyamoto Y, Namisato M, Bobosha K, Salgado CG, da Silva MB, Bouth RC, Frade MAC, Filho FB, Barreto JG, Nery JAC, Bührer-Sékula S, Lupien A, Al-Samie AR, Al-Qubati Y, Alkubati AS, Bretzel G, Vera-Cabrera L, Sakho F, Johnson CR, Kodio M, Fomba A, Sow SO, Gado M, Konaté O, Stefani MMA, Penna GO, Suffys PN, Sarno EN, Moraes MO, Rosa PS, Baptista IMFD, Spencer JS, Aseffa A, Matsuoka M, Kai M, Cole ST.

Nat Commun. 2018 Jan 24;9(1):352. doi: 10.1038/s41467-017-02576-z.

16.

Diversity, prevalence and host specificity of avian parasites in southern Tunisian oases.

Ayadi T, Selmi S, Hammouda A, Reis S, Boulinier T, Loiseau C.

Parasitology. 2018 Jun;145(7):971-978. doi: 10.1017/S0031182017002141. Epub 2017 Nov 23.

PMID:
29166951
17.

Tuberculosis in Swiss captive Asian elephants: microevolution of Mycobacterium tuberculosis characterized by multilocus variable-number tandem-repeat analysis and whole-genome sequencing.

Ghielmetti G, Coscolla M, Ruetten M, Friedel U, Loiseau C, Feldmann J, Steinmetz HW, Stucki D, Gagneux S.

Sci Rep. 2017 Nov 7;7(1):14647. doi: 10.1038/s41598-017-15278-9.

18.

Insularity effects on the assemblage of the blood parasite community of the birds from the Gulf of Guinea.

Loiseau C, Melo M, Lobato E, Beadell JS, Fleischer RC, Reis S, Doutrelant C, Covas R.

J Biogeogr. 2017 Nov;44(11):2607-2617. doi: 10.1111/jbi.13060. Epub 2017 Jul 11.

19.

Ice nucleating agents allow embryo freezing without manual seeding.

Teixeira M, Buff S, Desnos H, Loiseau C, Bruyère P, Joly T, Commin L.

Theriogenology. 2017 Dec;104:173-178. doi: 10.1016/j.theriogenology.2017.08.012. Epub 2017 Aug 18.

PMID:
28863350
20.

Current Perspectives for the use of Gonane Progesteronergic Drugs in the Treatment of Central Hypoventilation Syndromes.

Loiseau C, Cayetanot F, Joubert F, Perrin-Terrin AS, Cardot P, Fiamma MN, Frugiere A, Straus C, Bodineau L.

Curr Neuropharmacol. 2018;16(10):1433-1454. doi: 10.2174/1570159X15666170719104605. Review.

21.

Whole genome sequencing distinguishes between relapse and reinfection in recurrent leprosy cases.

Stefani MMA, Avanzi C, Bührer-Sékula S, Benjak A, Loiseau C, Singh P, Pontes MAA, Gonçalves HS, Hungria EM, Busso P, Piton J, Silveira MIS, Cruz R, Schetinni A, Costa MB, Virmond MCL, Diorio SM, Dias-Baptista IMF, Rosa PS, Matsuoka M, Penna MLF, Cole ST, Penna GO.

PLoS Negl Trop Dis. 2017 Jun 15;11(6):e0005598. doi: 10.1371/journal.pntd.0005598. eCollection 2017 Jun.

22.

First record of Aedes albopictus (Skuse 1894) on São tomé island.

Reis S, Cornel AJ, Melo M, Pereira H, Loiseau C.

Acta Trop. 2017 Jul;171:86-89. doi: 10.1016/j.actatropica.2017.03.035. Epub 2017 Apr 1.

PMID:
28377219
23.

Key Brainstem Structures Activated during Hypoxic Exposure in One-day-old Mice Highlight Characteristics for Modeling Breathing Network in Premature Infants.

Joubert F, Loiseau C, Perrin-Terrin AS, Cayetanot F, Frugière A, Voituron N, Bodineau L.

Front Physiol. 2016 Dec 9;7:609. doi: 10.3389/fphys.2016.00609. eCollection 2016.

24.

Immune signatures of protective spleen memory CD8 T cells.

Brinza L, Djebali S, Tomkowiak M, Mafille J, Loiseau C, Jouve PE, de Bernard S, Buffat L, Lina B, Ottmann M, Rosa-Calatrava M, Schicklin S, Bonnefoy N, Lauvau G, Grau M, Wencker M, Arpin C, Walzer T, Leverrier Y, Marvel J.

Sci Rep. 2016 Nov 24;6:37651. doi: 10.1038/srep37651.

25.

Red squirrels in the British Isles are infected with leprosy bacilli.

Avanzi C, Del-Pozo J, Benjak A, Stevenson K, Simpson VR, Busso P, McLuckie J, Loiseau C, Lawton C, Schoening J, Shaw DJ, Piton J, Vera-Cabrera L, Velarde-Felix JS, McDermott F, Gordon SV, Cole ST, Meredith AL.

Science. 2016 Nov 11;354(6313):744-747.

PMID:
27846605
26.

The Genome of the Toluene-Degrading Pseudomonas veronii Strain 1YdBTEX2 and Its Differential Gene Expression in Contaminated Sand.

Morales M, Sentchilo V, Bertelli C, Komljenovic A, Kryuchkova-Mostacci N, Bourdilloud A, Linke B, Goesmann A, Harshman K, Segers F, Delapierre F, Fiorucci D, Seppey M, Trofimenco E, Berra P, El Taher A, Loiseau C, Roggero D, Sulfiotti M, Etienne A, Ruiz Buendia G, Pillard L, Escoriza A, Moritz R, Schneider C, Alfonso E, Ben Jeddou F, Selmoni O, Resch G, Greub G, Emery O, Dubey M, Pillonel T, Robinson-Rechavi M, van der Meer JR.

PLoS One. 2016 Nov 3;11(11):e0165850. doi: 10.1371/journal.pone.0165850. eCollection 2016.

27.

Retrospective evaluation of blood copper stable isotopes ratio 65 Cu/63 Cu as a biomarker of cancer in dogs.

Chamel G, Gourlan AT, Télouk P, Sayag D, Milliard V, Loiseau C, Simon M, Buff S, Ponce F.

Vet Comp Oncol. 2017 Dec;15(4):1323-1332. doi: 10.1111/vco.12273. Epub 2016 Oct 6.

PMID:
27714906
28.

Specific Anti-Leukemic Activity of the Peptide Warnericin RK and Analogues and Visualization of Their Effect on Cancer Cells by Chemical Raman Imaging.

Loiseau C, Augenstreich J, Marchand A, Harté E, Garcia M, Verdon J, Mesnil M, Lecomte S, Berjeaud JM.

PLoS One. 2016 Sep 6;11(9):e0162007. doi: 10.1371/journal.pone.0162007. eCollection 2016.

29.

Transmission of Drug-Resistant Leprosy in Guinea-Conakry Detected Using Molecular Epidemiological Approaches.

Avanzi C, Busso P, Benjak A, Loiseau C, Fomba A, Doumbia G, Camara I, Lamou A, Sock G, Drame T, Kodio M, Sakho F, Sow SO, Cole ST, Johnson RC.

Clin Infect Dis. 2016 Dec 1;63(11):1482-1484. Epub 2016 Aug 23.

PMID:
27558568
30.

Study of commercial detector responses in non-equilibrium small photon fields of a 1000MU/min CyberKnife system.

Huet C, Moignier C, Barraux V, Loiseau C, Sebe-Mercier K, Batalla A, Clairand I.

Phys Med. 2016 Jun;32(6):818-25. doi: 10.1016/j.ejmp.2016.05.052. Epub 2016 May 24.

PMID:
27229368
31.

Legionella pneumophila: The Paradox of a Highly Sensitive Opportunistic Waterborne Pathogen Able to Persist in the Environment.

Berjeaud JM, Chevalier S, Schlusselhuber M, Portier E, Loiseau C, Aucher W, Lesouhaitier O, Verdon J.

Front Microbiol. 2016 Apr 8;7:486. doi: 10.3389/fmicb.2016.00486. eCollection 2016. Review.

32.

Oral Phage Therapy of Acute Bacterial Diarrhea With Two Coliphage Preparations: A Randomized Trial in Children From Bangladesh.

Sarker SA, Sultana S, Reuteler G, Moine D, Descombes P, Charton F, Bourdin G, McCallin S, Ngom-Bru C, Neville T, Akter M, Huq S, Qadri F, Talukdar K, Kassam M, Delley M, Loiseau C, Deng Y, El Aidy S, Berger B, Brüssow H.

EBioMedicine. 2016 Jan 5;4:124-37. doi: 10.1016/j.ebiom.2015.12.023. eCollection 2016 Feb.

33.

CCR6(-) regulatory T cells blunt the restoration of gut Th17 cells along the CCR6-CCL20 axis in treated HIV-1-infected individuals.

Loiseau C, Requena M, Mavigner M, Cazabat M, Carrere N, Suc B, Barange K, Alric L, Marchou B, Massip P, Izopet J, Delobel P.

Mucosal Immunol. 2016 Sep;9(5):1137-50. doi: 10.1038/mi.2016.7. Epub 2016 Feb 17.

PMID:
26883727
34.

Avian malaria in a boreal resident species: long-term temporal variability, and increased prevalence in birds with avian keratin disorder.

Wilkinson LC, Handel CM, Van Hemert C, Loiseau C, Sehgal RN.

Int J Parasitol. 2016 Apr;46(4):281-90. doi: 10.1016/j.ijpara.2015.12.008. Epub 2016 Jan 29.

PMID:
26828894
35.

Position-specific automated processing of V3 env ultra-deep pyrosequencing data for predicting HIV-1 tropism.

Jeanne N, Saliou A, Carcenac R, Lefebvre C, Dubois M, Cazabat M, Nicot F, Loiseau C, Raymond S, Izopet J, Delobel P.

Sci Rep. 2015 Nov 20;5:16944. doi: 10.1038/srep16944.

36.

Age-Associated Methylation Suppresses SPRY1, Leading to a Failure of Re-quiescence and Loss of the Reserve Stem Cell Pool in Elderly Muscle.

Bigot A, Duddy WJ, Ouandaogo ZG, Negroni E, Mariot V, Ghimbovschi S, Harmon B, Wielgosik A, Loiseau C, Devaney J, Dumonceaux J, Butler-Browne G, Mouly V, Duguez S.

Cell Rep. 2015 Nov 10;13(6):1172-1182. doi: 10.1016/j.celrep.2015.09.067. Epub 2015 Oct 29.

37.

New therapeutic approaches in myelodysplastic syndromes: Hypomethylating agents and lenalidomide.

Loiseau C, Ali A, Itzykson R.

Exp Hematol. 2015 Aug;43(8):661-72. doi: 10.1016/j.exphem.2015.05.014. Epub 2015 Jun 27. Review.

PMID:
26123365
38.

Effect of amino acid substitution in the staphylococcal peptides warnericin RK and PSMα on their anti-Legionella and hemolytic activities.

Marchand A, Augenstreich J, Loiseau C, Verdon J, Lecomte S, Berjeaud JM.

Mol Cell Biochem. 2015 Jul;405(1-2):159-67. doi: 10.1007/s11010-015-2407-1. Epub 2015 Apr 14.

PMID:
25869678
39.

Surfactin from Bacillus subtilis displays an unexpected anti-Legionella activity.

Loiseau C, Schlusselhuber M, Bigot R, Bertaux J, Berjeaud JM, Verdon J.

Appl Microbiol Biotechnol. 2015 Jun;99(12):5083-93. doi: 10.1007/s00253-014-6317-z. Epub 2015 Jan 9.

PMID:
25573468
40.

Coevolutionary patterns and diversification of avian malaria parasites in African sunbirds (Family Nectariniidae).

Lauron EJ, Loiseau C, Bowie RC, Spicer GS, Smith TB, Melo M, Sehgal RN.

Parasitology. 2015 Apr;142(5):635-47. doi: 10.1017/S0031182014001681. Epub 2014 Oct 29.

PMID:
25352083
41.

Distribution, diversity and drivers of blood-borne parasite co-infections in Alaskan bird populations.

Oakgrove KS, Harrigan RJ, Loiseau C, Guers S, Seppi B, Sehgal RN.

Int J Parasitol. 2014 Sep;44(10):717-27. doi: 10.1016/j.ijpara.2014.04.011. Epub 2014 Jul 9.

PMID:
25014331
42.

The progestin etonogestrel enhances the respiratory response to metabolic acidosis in newborn rats. Evidence for a mechanism involving supramedullary structures.

Loiseau C, Osinski D, Joubert F, Straus C, Similowski T, Bodineau L.

Neurosci Lett. 2014 May 1;567:63-7. doi: 10.1016/j.neulet.2014.03.040. Epub 2014 Mar 29.

PMID:
24686181
43.

Epidemiology of Plasmodium relictum infection in the house sparrow.

Bichet C, Sorci G, Robert A, Julliard R, Lendvai AZ, Chastel O, Garnier S, Loiseau C.

J Parasitol. 2014 Feb;100(1):59-65. doi: 10.1645/12-24.1. Epub 2013 Aug 29.

PMID:
23987473
44.

Primary resistance of CCR5-tropic HIV-1 to maraviroc cannot be predicted by the V3 sequence.

Delobel P, Cazabat M, Saliou A, Loiseau C, Coassin L, Raymond S, Requena M, Marchou B, Massip P, Izopet J.

J Antimicrob Chemother. 2013 Nov;68(11):2506-14. doi: 10.1093/jac/dkt249. Epub 2013 Jun 21.

PMID:
23794603
45.

Genetic variations creating microRNA target sites in the FXN 3'-UTR affect frataxin expression in Friedreich ataxia.

Bandiera S, Cartault F, Jannot AS, Hatem E, Girard M, Rifai L, Loiseau C, Munnich A, Lyonnet S, Henrion-Caude A.

PLoS One. 2013;8(1):e54791. doi: 10.1371/journal.pone.0054791. Epub 2013 Jan 30.

46.

Predictions of avian Plasmodium expansion under climate change.

Loiseau C, Harrigan RJ, Bichet C, Julliard R, Garnier S, Lendvai AZ, Chastel O, Sorci G.

Sci Rep. 2013;3:1126. doi: 10.1038/srep01126. Epub 2013 Jan 24.

47.

Urbanization, trace metal pollution, and malaria prevalence in the house sparrow.

Bichet C, Scheifler R, Cœurdassier M, Julliard R, Sorci G, Loiseau C.

PLoS One. 2013;8(1):e53866. doi: 10.1371/journal.pone.0053866. Epub 2013 Jan 16.

48.

Diversity and phylogenetic relationships of hemosporidian parasites in birds of Socorro Island, México, and their role in the re-introduction of the Socorro dove (Zenaida graysoni).

Carlson JS, Martínez-Gómez JE, Valkiūnas G, Loiseau C, Bell DA, Sehgal RN.

J Parasitol. 2013 Apr;99(2):270-6. doi: 10.1645/GE-3206.1. Epub 2012 Oct 8.

PMID:
23043349
49.

First evidence and predictions of Plasmodium transmission in Alaskan bird populations.

Loiseau C, Harrigan RJ, Cornel AJ, Guers SL, Dodge M, Marzec T, Carlson JS, Seppi B, Sehgal RN.

PLoS One. 2012;7(9):e44729. doi: 10.1371/journal.pone.0044729. Epub 2012 Sep 19.

50.

Host and habitat specialization of avian malaria in Africa.

Loiseau C, Harrigan RJ, Robert A, Bowie RC, Thomassen HA, Smith TB, Sehgal RN.

Mol Ecol. 2012 Jan;21(2):431-41. doi: 10.1111/j.1365-294X.2011.05341.x. Epub 2011 Dec 5.

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