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Cryptococcus neoformans Chitin Synthase 3 Plays a Critical Role in Dampening Host Inflammatory Responses.

Hole CR, Lam WC, Upadhya R, Lodge JK.

mBio. 2020 Feb 18;11(1). pii: e03373-19. doi: 10.1128/mBio.03373-19.


Melanin deposition in two Cryptococcus species depends on cell-wall composition and flexibility.

Chrissian C, Camacho E, Fu MS, Prados-Rosales R, Chatterjee S, Cordero RJB, Lodge JK, Casadevall A, Stark RE.

J Biol Chem. 2020 Feb 14;295(7):1815-1828. doi: 10.1074/jbc.RA119.011949. Epub 2020 Jan 2.


The Aminoalkylindole BML-190 Negatively Regulates Chitosan Synthesis via the Cyclic AMP/Protein Kinase A1 Pathway in Cryptococcus neoformans.

Maybruck BT, Lam WC, Specht CA, Ilagan MXG, Donlin MJ, Lodge JK.

mBio. 2019 Dec 17;10(6). pii: e02264-19. doi: 10.1128/mBio.02264-19.


Chitosan Biosynthesis and Virulence in the Human Fungal Pathogen Cryptococcus gattii.

Lam WC, Upadhya R, Specht CA, Ragsdale AE, Hole CR, Levitz SM, Lodge JK.

mSphere. 2019 Oct 9;4(5). pii: e00644-19. doi: 10.1128/mSphere.00644-19.


Methodological Considerations for a Vascular Function Test Battery.

Kimble R, Keane KM, Lodge JK, Howatson G.

Int J Sports Med. 2019 Sep;40(9):601-608. doi: 10.1055/a-0946-1293. Epub 2019 Jul 15.


Cryptococcus neoformans Cda1 and Its Chitin Deacetylase Activity Are Required for Fungal Pathogenesis.

Upadhya R, Baker LG, Lam WC, Specht CA, Donlin MJ, Lodge JK.

mBio. 2018 Nov 20;9(6). pii: e02087-18. doi: 10.1128/mBio.02087-18.


Dietary intake of anthocyanins and risk of cardiovascular disease: A systematic review and meta-analysis of prospective cohort studies.

Kimble R, Keane KM, Lodge JK, Howatson G.

Crit Rev Food Sci Nutr. 2019;59(18):3032-3043. doi: 10.1080/10408398.2018.1509835. Epub 2018 Oct 2.


The influence of juicing on the appearance of blueberry metabolites 2 h after consumption: a metabolite profiling approach.

Langer S, Kennel A, Lodge JK.

Br J Nutr. 2018 Jun;119(11):1233-1244. doi: 10.1017/S0007114518000855.


Vaccination with Recombinant Cryptococcus Proteins in Glucan Particles Protects Mice against Cryptococcosis in a Manner Dependent upon Mouse Strain and Cryptococcal Species.

Specht CA, Lee CK, Huang H, Hester MM, Liu J, Luckie BA, Torres Santana MA, Mirza Z, Khoshkenar P, Abraham A, Shen ZT, Lodge JK, Akalin A, Homan J, Ostroff GR, Levitz SM.

mBio. 2017 Nov 28;8(6). pii: e01872-17. doi: 10.1128/mBio.01872-17.


A fluorogenic C. neoformans reporter strain with a robust expression of m-cherry expressed from a safe haven site in the genome.

Upadhya R, Lam WC, Maybruck BT, Donlin MJ, Chang AL, Kayode S, Ormerod KL, Fraser JA, Doering TL, Lodge JK.

Fungal Genet Biol. 2017 Nov;108:13-25. doi: 10.1016/j.fgb.2017.08.008. Epub 2017 Sep 12.


Lycopene and tomato and risk of cardiovascular diseases: A systematic review and meta-analysis of epidemiological evidence.

Cheng HM, Koutsidis G, Lodge JK, Ashor AW, Siervo M, Lara J.

Crit Rev Food Sci Nutr. 2019;59(1):141-158. doi: 10.1080/10408398.2017.1362630. Epub 2017 Sep 25.


Tomato and lycopene supplementation and cardiovascular risk factors: A systematic review and meta-analysis.

Cheng HM, Koutsidis G, Lodge JK, Ashor A, Siervo M, Lara J.

Atherosclerosis. 2017 Feb;257:100-108. doi: 10.1016/j.atherosclerosis.2017.01.009. Epub 2017 Jan 13. Review.


Shigatoxin encoding Bacteriophage ϕ24B modulates bacterial metabolism to raise antimicrobial tolerance.

Holt GS, Lodge JK, McCarthy AJ, Graham AK, Young G, Bridge SH, Brown AK, Veses-Garcia M, Lanyon CV, Sails A, Allison HE, Smith DL.

Sci Rep. 2017 Jan 20;7:40424. doi: 10.1038/srep40424.


Intracellular Action of a Secreted Peptide Required for Fungal Virulence.

Homer CM, Summers DK, Goranov AI, Clarke SC, Wiesner DL, Diedrich JK, Moresco JJ, Toffaletti D, Upadhya R, Caradonna I, Petnic S, Pessino V, Cuomo CA, Lodge JK, Perfect J, Yates JR 3rd, Nielsen K, Craik CS, Madhani HD.

Cell Host Microbe. 2016 Jun 8;19(6):849-64. doi: 10.1016/j.chom.2016.05.001. Epub 2016 May 19.


Induction of Protective Immunity to Cryptococcal Infection in Mice by a Heat-Killed, Chitosan-Deficient Strain of Cryptococcus neoformans.

Upadhya R, Lam WC, Maybruck B, Specht CA, Levitz SM, Lodge JK.

mBio. 2016 May 10;7(3). pii: e00547-16. doi: 10.1128/mBio.00547-16.


Protection against Experimental Cryptococcosis following Vaccination with Glucan Particles Containing Cryptococcus Alkaline Extracts.

Specht CA, Lee CK, Huang H, Tipper DJ, Shen ZT, Lodge JK, Leszyk J, Ostroff GR, Levitz SM.

mBio. 2015 Dec 22;6(6):e01905-15. doi: 10.1128/mBio.01905-15.


Changes in the human plasma and urinary metabolome associated with acute dietary exposure to sucrose and the identification of potential biomarkers of sucrose intake.

Beckmann M, Joosen AM, Clarke MM, Mugridge O, Frost G, Engel B, Taillart K, Lloyd AJ, Draper J, Lodge JK.

Mol Nutr Food Res. 2016 Feb;60(2):444-57. doi: 10.1002/mnfr.201500495. Epub 2015 Sep 15.


Phytochemical uptake following human consumption of Montmorency tart cherry (L. Prunus cerasus) and influence of phenolic acids on vascular smooth muscle cells in vitro.

Keane KM, Bell PG, Lodge JK, Constantinou CL, Jenkinson SE, Bass R, Howatson G.

Eur J Nutr. 2016 Jun;55(4):1695-705. doi: 10.1007/s00394-015-0988-9. Epub 2015 Jul 11.


Cross talk between the cell wall integrity and cyclic AMP/protein kinase A pathways in Cryptococcus neoformans.

Donlin MJ, Upadhya R, Gerik KJ, Lam W, VanArendonk LG, Specht CA, Sharma NK, Lodge JK.

mBio. 2014 Aug 12;5(4). pii: e01573-14. doi: 10.1128/mBio.01573-14.


The effects of a diet rich in inulin or wheat fibre on markers of cardiovascular disease in overweight male subjects.

Tripkovic L, Muirhead NC, Hart KH, Frost GS, Lodge JK.

J Hum Nutr Diet. 2015 Oct;28(5):476-85. doi: 10.1111/jhn.12251. Epub 2014 Jun 12.


Interindividual and intraindividual variation in pulse wave velocity measurements in a male population.

Tripkovic L, Hart KH, Frost GS, Lodge JK.

Blood Press Monit. 2014 Aug;19(4):233-41. doi: 10.1097/MBP.0000000000000052.


Determination of selected water-soluble vitamins using hydrophilic chromatography: a comparison of photodiode array, fluorescence, and coulometric detection, and validation in a breakfast cereal matrix.

Langer S, Lodge JK.

J Chromatogr B Analyt Technol Biomed Life Sci. 2014 Jun 1;960:73-81. doi: 10.1016/j.jchromb.2014.04.001. Epub 2014 Apr 18.


Cryptococcus at work: gene expression during human infection.

Upadhya R, Donlin MJ, Lodge JK.

mBio. 2014 Apr 22;5(2):e01097. doi: 10.1128/mBio.01097-14.


Analysis of the genome and transcriptome of Cryptococcus neoformans var. grubii reveals complex RNA expression and microevolution leading to virulence attenuation.

Janbon G, Ormerod KL, Paulet D, Byrnes EJ 3rd, Yadav V, Chatterjee G, Mullapudi N, Hon CC, Billmyre RB, Brunel F, Bahn YS, Chen W, Chen Y, Chow EW, Coppée JY, Floyd-Averette A, Gaillardin C, Gerik KJ, Goldberg J, Gonzalez-Hilarion S, Gujja S, Hamlin JL, Hsueh YP, Ianiri G, Jones S, Kodira CD, Kozubowski L, Lam W, Marra M, Mesner LD, Mieczkowski PA, Moyrand F, Nielsen K, Proux C, Rossignol T, Schein JE, Sun S, Wollschlaeger C, Wood IA, Zeng Q, Neuvéglise C, Newlon CS, Perfect JR, Lodge JK, Idnurm A, Stajich JE, Kronstad JW, Sanyal K, Heitman J, Fraser JA, Cuomo CA, Dietrich FS.

PLoS Genet. 2014 Apr 17;10(4):e1004261. doi: 10.1371/journal.pgen.1004261. eCollection 2014 Apr.


Sulphiredoxin plays peroxiredoxin-dependent and -independent roles via the HOG signalling pathway in Cryptococcus neoformans and contributes to fungal virulence.

Upadhya R, Kim H, Jung KW, Park G, Lam W, Lodge JK, Bahn YS.

Mol Microbiol. 2013 Nov;90(3):630-648. doi: 10.1111/mmi.12388. Epub 2013 Oct 3.


Global transcriptome profile of Cryptococcus neoformans during exposure to hydrogen peroxide induced oxidative stress.

Upadhya R, Campbell LT, Donlin MJ, Aurora R, Lodge JK.

PLoS One. 2013;8(1):e55110. doi: 10.1371/journal.pone.0055110. Epub 2013 Jan 28.


A metabolomic investigation of the effects of vitamin E supplementation in humans.

Wong M, Lodge JK.

Nutr Metab (Lond). 2012 Dec 19;9(1):110. doi: 10.1186/1743-7075-9-110.


Role of Cryptococcus neoformans Rho1 GTPases in the PKC1 signaling pathway in response to thermal stress.

Lam WC, Gerik KJ, Lodge JK.

Eukaryot Cell. 2013 Jan;12(1):118-31. doi: 10.1128/EC.05305-11. Epub 2012 Nov 16.


Cryptococcus neoformans phosphoinositide-dependent kinase 1 (PDK1) ortholog is required for stress tolerance and survival in murine phagocytes.

Chabrier-Roselló Y, Gerik KJ, Koselny K, DiDone L, Lodge JK, Krysan DJ.

Eukaryot Cell. 2013 Jan;12(1):12-22. doi: 10.1128/EC.00235-12. Epub 2012 Oct 19.


A glycosylphosphatidylinositol anchor is required for membrane localization but dispensable for cell wall association of chitin deacetylase 2 in Cryptococcus neoformans.

Gilbert NM, Baker LG, Specht CA, Lodge JK.

mBio. 2012 Feb 21;3(1). pii: e00007-12. doi: 10.1128/mBio.00007-12. Print 2012.


Galactose-Inducible promoters in Cryptococcus neoformans var. grubii.

Baker LG, Lodge JK.

Methods Mol Biol. 2012;845:211-26. doi: 10.1007/978-1-61779-539-8_14.


Multiple gene deletion in Cryptococcus neoformans using the Cre-lox system.

Baker LG, Lodge JK.

Methods Mol Biol. 2012;845:85-98. doi: 10.1007/978-1-61779-539-8_6.


Cell wall chitosan is necessary for virulence in the opportunistic pathogen Cryptococcus neoformans.

Baker LG, Specht CA, Lodge JK.

Eukaryot Cell. 2011 Sep;10(9):1264-8. doi: 10.1128/EC.05138-11. Epub 2011 Jul 22.


Metabolomics and human nutrition.

Primrose S, Draper J, Elsom R, Kirkpatrick V, Mathers JC, Seal C, Beckmann M, Haldar S, Beattie JH, Lodge JK, Jenab M, Keun H, Scalbert A.

Br J Nutr. 2011 Apr;105(8):1277-83. doi: 10.1017/S0007114510004812. Epub 2011 Jan 24.


KRE genes are required for beta-1,6-glucan synthesis, maintenance of capsule architecture and cell wall protein anchoring in Cryptococcus neoformans.

Gilbert NM, Donlin MJ, Gerik KJ, Specht CA, Djordjevic JT, Wilson CF, Sorrell TC, Lodge JK.

Mol Microbiol. 2010 Apr;76(2):517-34. doi: 10.1111/j.1365-2958.2010.07119.x. Epub 2010 Apr 6.


Gene-regulatory activity of alpha-tocopherol.

Rimbach G, Moehring J, Huebbe P, Lodge JK.

Molecules. 2010 Mar 12;15(3):1746-61. doi: 10.3390/molecules15031746. Review.


Implications of apolipoprotein E genotype on inflammation and vitamin E status.

Huebbe P, Lodge JK, Rimbach G.

Mol Nutr Food Res. 2010 May;54(5):623-30. doi: 10.1002/mnfr.200900398. Review.


Going green in Cryptococcus neoformans: the recycling of a selectable drug marker.

Patel RD, Lodge JK, Baker LG.

Fungal Genet Biol. 2010 Mar;47(3):191-8. doi: 10.1016/j.fgb.2009.11.007. Epub 2009 Nov 26.


Chitinases are essential for sexual development but not vegetative growth in Cryptococcus neoformans.

Baker LG, Specht CA, Lodge JK.

Eukaryot Cell. 2009 Nov;8(11):1692-705. doi: 10.1128/EC.00227-09. Epub 2009 Sep 4.


Surfactant protein D increases phagocytosis of hypocapsular Cryptococcus neoformans by murine macrophages and enhances fungal survival.

Geunes-Boyer S, Oliver TN, Janbon G, Lodge JK, Heitman J, Perfect JR, Wright JR.

Infect Immun. 2009 Jul;77(7):2783-94. doi: 10.1128/IAI.00088-09. Epub 2009 May 18.


Daily consumption of an aqueous green tea extract supplement does not impair liver function or alter cardiovascular disease risk biomarkers in healthy men.

Frank J, George TW, Lodge JK, Rodriguez-Mateos AM, Spencer JP, Minihane AM, Rimbach G.

J Nutr. 2009 Jan;139(1):58-62. doi: 10.3945/jn.108.096412. Epub 2008 Dec 3.


Three galactose inducible promoters for use in C. neoformans var. grubii.

Ruff JA, Lodge JK, Baker LG.

Fungal Genet Biol. 2009 Jan;46(1):9-16. doi: 10.1016/j.fgb.2008.10.003. Epub 2008 Oct 14.


Mass spectrometry approaches for vitamin E research.

Lodge JK.

Biochem Soc Trans. 2008 Oct;36(Pt 5):1066-70. doi: 10.1042/BST0361066.


PKC1 is essential for protection against both oxidative and nitrosative stresses, cell integrity, and normal manifestation of virulence factors in the pathogenic fungus Cryptococcus neoformans.

Gerik KJ, Bhimireddy SR, Ryerse JS, Specht CA, Lodge JK.

Eukaryot Cell. 2008 Oct;7(10):1685-98. doi: 10.1128/EC.00146-08. Epub 2008 Aug 8.


Cryptococcus neoformans, a fungus under stress.

Brown SM, Campbell LT, Lodge JK.

Curr Opin Microbiol. 2007 Aug;10(4):320-5. Epub 2007 Aug 17. Review.


Chitosan, the deacetylated form of chitin, is necessary for cell wall integrity in Cryptococcus neoformans.

Baker LG, Specht CA, Donlin MJ, Lodge JK.

Eukaryot Cell. 2007 May;6(5):855-67. Epub 2007 Mar 30.


Cigarette smokers differ in their handling of natural (RRR) and synthetic (all rac) alpha-tocopherol: a biokinetic study in apoE4 male subjects.

Proteggente AR, Rota C, Majewicz J, Rimbach G, Minihane AM, Kraemer K, Lodge JK.

Free Radic Biol Med. 2006 Jun 15;40(12):2080-91. Epub 2006 Feb 28.


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