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Items: 1 to 50 of 158

1.

HISTONE DEACETYLASE 9 stimulates auxin-dependent thermomorphogenesis in Arabidopsis thaliana by mediating H2A.Z depletion.

van der Woude LC, Perrella G, Snoek BL, van Hoogdalem M, Novák O, van Verk MC, van Kooten HN, Zorn LE, Tonckens R, Dongus JA, Praat M, Stouten EA, Proveniers MCG, Vellutini E, Patitaki E, Shapulatov U, Kohlen W, Balasubramanian S, Ljung K, van der Krol AR, Smeekens S, Kaiserli E, van Zanten M.

Proc Natl Acad Sci U S A. 2019 Dec 10;116(50):25343-25354. doi: 10.1073/pnas.1911694116. Epub 2019 Nov 25.

PMID:
31767749
2.

Autoregulation of RCO by Low-Affinity Binding Modulates Cytokinin Action and Shapes Leaf Diversity.

Hajheidari M, Wang Y, Bhatia N, Vuolo F, Franco-Zorrilla JM, Karady M, Mentink RA, Wu A, Oluwatobi BR, Müller B, Dello Ioio R, Laurent S, Ljung K, Huijser P, Gan X, Tsiantis M.

Curr Biol. 2019 Dec 16;29(24):4183-4192.e6. doi: 10.1016/j.cub.2019.10.040. Epub 2019 Nov 21.

3.

PIN-driven auxin transport emerged early in streptophyte evolution.

Skokan R, Medvecká E, Viaene T, Vosolsobě S, Zwiewka M, Müller K, Skůpa P, Karady M, Zhang Y, Janacek DP, Hammes UZ, Ljung K, Nodzyński T, Petrášek J, Friml J.

Nat Plants. 2019 Nov;5(11):1114-1119. doi: 10.1038/s41477-019-0542-5. Epub 2019 Nov 11.

PMID:
31712756
4.

A bacterial assay for rapid screening of IAA catabolic enzymes.

Brunoni F, Collani S, Šimura J, Schmid M, Bellini C, Ljung K.

Plant Methods. 2019 Nov 4;15:126. doi: 10.1186/s13007-019-0509-6. eCollection 2019.

5.

A MYC2/MYC3/MYC4-dependent transcription factor network regulates water spray-responsive gene expression and jasmonate levels.

Van Moerkercke A, Duncan O, Zander M, Šimura J, Broda M, Vanden Bossche R, Lewsey MG, Lama S, Singh KB, Ljung K, Ecker JR, Goossens A, Millar AH, Van Aken O.

Proc Natl Acad Sci U S A. 2019 Nov 12;116(46):23345-23356. doi: 10.1073/pnas.1911758116. Epub 2019 Oct 29.

PMID:
31662474
6.

Epigenetic Regulation of Auxin Homeostasis.

Mateo-Bonmatí E, Casanova-Sáez R, Ljung K.

Biomolecules. 2019 Oct 18;9(10). pii: E623. doi: 10.3390/biom9100623. Review.

7.

Implantable Organic Electronic Ion Pump Enables ABA Hormone Delivery for Control of Stomata in an Intact Tobacco Plant.

Bernacka-Wojcik I, Huerta M, Tybrandt K, Karady M, Mulla MY, Poxson DJ, Gabrielsson EO, Ljung K, Simon DT, Berggren M, Stavrinidou E.

Small. 2019 Oct;15(43):e1902189. doi: 10.1002/smll.201902189. Epub 2019 Sep 12.

8.

A role for the auxin precursor anthranilic acid in root gravitropism via regulation of PIN-FORMED protein polarity and relocalisation in Arabidopsis.

Doyle SM, Rigal A, Grones P, Karady M, Barange DK, Majda M, Pařízková B, Karampelias M, Zwiewka M, Pěnčík A, Almqvist F, Ljung K, Novák O, Robert S.

New Phytol. 2019 Aug;223(3):1420-1432. doi: 10.1111/nph.15877. Epub 2019 Jun 7.

PMID:
31038751
9.

Surveillance of cell wall diffusion barrier integrity modulates water and solute transport in plants.

Wang P, Calvo-Polanco M, Reyt G, Barberon M, Champeyroux C, Santoni V, Maurel C, Franke RB, Ljung K, Novak O, Geldner N, Boursiac Y, Salt DE.

Sci Rep. 2019 Mar 12;9(1):4227. doi: 10.1038/s41598-019-40588-5.

10.

Selective auxin agonists induce specific AUX/IAA protein degradation to modulate plant development.

Vain T, Raggi S, Ferro N, Barange DK, Kieffer M, Ma Q, Doyle SM, Thelander M, Pařízková B, Novák O, Ismail A, Enquist PA, Rigal A, Łangowska M, Ramans Harborough S, Zhang Y, Ljung K, Callis J, Almqvist F, Kepinski S, Estelle M, Pauwels L, Robert S.

Proc Natl Acad Sci U S A. 2019 Mar 26;116(13):6463-6472. doi: 10.1073/pnas.1809037116. Epub 2019 Mar 8.

11.

Regulatory Diversification of INDEHISCENT in the Capsella Genus Directs Variation in Fruit Morphology.

Dong Y, Jantzen F, Stacey N, Łangowski Ł, Moubayidin L, Šimura J, Ljung K, Østergaard L.

Curr Biol. 2019 Mar 18;29(6):1038-1046.e4. doi: 10.1016/j.cub.2019.01.057. Epub 2019 Feb 28.

12.

Human Fetal Cardiac Mesenchymal Stromal Cells Differentiate In Vivo into Endothelial Cells and Contribute to Vasculogenesis in Immunocompetent Mice.

Ljung K, Grönlund A, Felldin U, Rodin S, Corbascio M, Österholm C, Grinnemo KH.

Stem Cells Dev. 2019 Mar 1;28(5):310-318. doi: 10.1089/scd.2018.0198. Epub 2019 Feb 5.

PMID:
30618344
13.

Auxin Function in the Brown Alga Dictyota dichotoma.

Bogaert KA, Blommaert L, Ljung K, Beeckman T, De Clerck O.

Plant Physiol. 2019 Jan;179(1):280-299. doi: 10.1104/pp.18.01041. Epub 2018 Nov 12.

14.

The Xerobranching Response Represses Lateral Root Formation When Roots Are Not in Contact with Water.

Orman-Ligeza B, Morris EC, Parizot B, Lavigne T, Babé A, Ligeza A, Klein S, Sturrock C, Xuan W, Novák O, Ljung K, Fernandez MA, Rodriguez PL, Dodd IC, De Smet I, Chaumont F, Batoko H, Périlleux C, Lynch JP, Bennett MJ, Beeckman T, Draye X.

Curr Biol. 2018 Oct 8;28(19):3165-3173.e5. doi: 10.1016/j.cub.2018.07.074. Epub 2018 Sep 27.

15.

Tissue-specific hormone profiles from woody poplar roots under bending stress.

De Zio E, Trupiano D, Karady M, Antoniadi I, Montagnoli A, Terzaghi M, Chiatante D, Ljung K, Scippa GS.

Physiol Plant. 2019 Jan;165(1):101-113. doi: 10.1111/ppl.12830. Epub 2018 Oct 15. No abstract available.

PMID:
30187489
16.

Broad spectrum developmental role of Brachypodium AUX1.

van der Schuren A, Voiniciuc C, Bragg J, Ljung K, Vogel J, Pauly M, Hardtke CS.

New Phytol. 2018 Sep;219(4):1216-1223. doi: 10.1111/nph.15332. Epub 2018 Jun 27.

17.

Control of root meristem establishment in conifers.

Brunoni F, Ljung K, Bellini C.

Physiol Plant. 2019 Jan;165(1):81-89. doi: 10.1111/ppl.12783. Epub 2018 Aug 6. Review.

PMID:
29920700
18.

Author Correction: A mechanistic framework for auxin dependent Arabidopsis root hair elongation to low external phosphate.

Bhosale R, Giri J, Pandey BK, Giehl RFH, Hartmann A, Traini R, Truskina J, Leftley N, Hanlon M, Swarup K, Rashed A, Voß U, Alonso J, Stepanova A, Yun J, Ljung K, Brown KM, Lynch JP, Dolan L, Vernoux T, Bishopp A, Wells D, von Wirén N, Bennett MJ, Swarup R.

Nat Commun. 2018 May 2;9(1):1818. doi: 10.1038/s41467-018-04281-x.

19.

Author Correction: Rice auxin influx carrier OsAUX1 facilitates root hair elongation in response to low external phosphate.

Giri J, Bhosale R, Huang G, Pandey BK, Parker H, Zappala S, Yang J, Dievart A, Bureau C, Ljung K, Price A, Rose T, Larrieu A, Mairhofer S, Sturrock CJ, White P, Dupuy L, Hawkesford M, Perin C, Liang W, Peret B, Hodgman CT, Lynch J, Wissuwa M, Zhang D, Pridmore T, Mooney SJ, Guiderdoni E, Swarup R, Bennett MJ.

Nat Commun. 2018 May 1;9(1):1810. doi: 10.1038/s41467-018-04280-y.

20.

Plant Hormonomics: Multiple Phytohormone Profiling by Targeted Metabolomics.

Šimura J, Antoniadi I, Široká J, Tarkowská D, Strnad M, Ljung K, Novák O.

Plant Physiol. 2018 Jun;177(2):476-489. doi: 10.1104/pp.18.00293. Epub 2018 Apr 27.

21.

Decalcification and survival of benthic foraminifera under the combined impacts of varying pH and salinity.

Charrieau LM, Filipsson HL, Nagai Y, Kawada S, Ljung K, Kritzberg E, Toyofuku T.

Mar Environ Res. 2018 Jul;138:36-45. doi: 10.1016/j.marenvres.2018.03.015. Epub 2018 Apr 3.

PMID:
29680163
22.

A mechanistic framework for auxin dependent Arabidopsis root hair elongation to low external phosphate.

Bhosale R, Giri J, Pandey BK, Giehl RFH, Hartmann A, Traini R, Truskina J, Leftley N, Hanlon M, Swarup K, Rashed A, Voß U, Alonso J, Stepanova A, Yun J, Ljung K, Brown KM, Lynch JP, Dolan L, Vernoux T, Bishopp A, Wells D, von Wirén N, Bennett MJ, Swarup R.

Nat Commun. 2018 Apr 12;9(1):1409. doi: 10.1038/s41467-018-03851-3. Erratum in: Nat Commun. 2018 May 2;9(1):1818.

23.

Rice auxin influx carrier OsAUX1 facilitates root hair elongation in response to low external phosphate.

Giri J, Bhosale R, Huang G, Pandey BK, Parker H, Zappala S, Yang J, Dievart A, Bureau C, Ljung K, Price A, Rose T, Larrieu A, Mairhofer S, Sturrock CJ, White P, Dupuy L, Hawkesford M, Perin C, Liang W, Peret B, Hodgman CT, Lynch J, Wissuwa M, Zhang D, Pridmore T, Mooney SJ, Guiderdoni E, Swarup R, Bennett MJ.

Nat Commun. 2018 Apr 12;9(1):1408. doi: 10.1038/s41467-018-03850-4. Erratum in: Nat Commun. 2018 May 1;9(1):1810.

24.

Circadian clock components control daily growth activities by modulating cytokinin levels and cell division-associated gene expression in Populus trees.

Edwards KD, Takata N, Johansson M, Jurca M, Novák O, Hényková E, Liverani S, Kozarewa I, Strnad M, Millar AJ, Ljung K, Eriksson ME.

Plant Cell Environ. 2018 Jun;41(6):1468-1482. doi: 10.1111/pce.13185. Epub 2018 Apr 15.

25.

Ultra-rapid auxin metabolite profiling for high-throughput mutant screening in Arabidopsis.

Pencík A, Casanova-Sáez R, Pilarová V, Žukauskaite A, Pinto R, Micol JL, Ljung K, Novák O.

J Exp Bot. 2018 Apr 27;69(10):2569-2579. doi: 10.1093/jxb/ery084.

26.

Transcriptional stimulation of rate-limiting components of the autophagic pathway improves plant fitness.

Minina EA, Moschou PN, Vetukuri RR, Sanchez-Vera V, Cardoso C, Liu Q, Elander PH, Dalman K, Beganovic M, Lindberg Yilmaz J, Marmon S, Shabala L, Suarez MF, Ljung K, Novák O, Shabala S, Stymne S, Hofius D, Bozhkov PV.

J Exp Bot. 2018 Mar 14;69(6):1415-1432. doi: 10.1093/jxb/ery010.

27.

Combined transcriptome and translatome analyses reveal a role for tryptophan-dependent auxin biosynthesis in the control of DOG1-dependent seed dormancy.

Bai B, Novák O, Ljung K, Hanson J, Bentsink L.

New Phytol. 2018 Feb;217(3):1077-1085. doi: 10.1111/nph.14885. Epub 2017 Nov 15.

28.

Type B Response Regulators Act As Central Integrators in Transcriptional Control of the Auxin Biosynthesis Enzyme TAA1.

Yan Z, Liu X, Ljung K, Li S, Zhao W, Yang F, Wang M, Tao Y.

Plant Physiol. 2017 Nov;175(3):1438-1454. doi: 10.1104/pp.17.00878. Epub 2017 Sep 20.

29.

Auxin minimum triggers the developmental switch from cell division to cell differentiation in the Arabidopsis root.

Di Mambro R, De Ruvo M, Pacifici E, Salvi E, Sozzani R, Benfey PN, Busch W, Novak O, Ljung K, Di Paola L, Marée AFM, Costantino P, Grieneisen VA, Sabatini S.

Proc Natl Acad Sci U S A. 2017 Sep 5;114(36):E7641-E7649. doi: 10.1073/pnas.1705833114. Epub 2017 Aug 22.

30.

Brassinosteroid signaling-dependent root responses to prolonged elevated ambient temperature.

Martins S, Montiel-Jorda A, Cayrel A, Huguet S, Roux CP, Ljung K, Vert G.

Nat Commun. 2017 Aug 21;8(1):309. doi: 10.1038/s41467-017-00355-4.

31.

Enhanced Secondary- and Hormone Metabolism in Leaves of Arbuscular Mycorrhizal Medicago truncatula.

Adolfsson L, Nziengui H, Abreu IN, Šimura J, Beebo A, Herdean A, Aboalizadeh J, Široká J, Moritz T, Novák O, Ljung K, Schoefs B, Spetea C.

Plant Physiol. 2017 Sep;175(1):392-411. doi: 10.1104/pp.16.01509. Epub 2017 Jul 11.

32.

Regulating plant physiology with organic electronics.

Poxson DJ, Karady M, Gabrielsson R, Alkattan AY, Gustavsson A, Doyle SM, Robert S, Ljung K, Grebe M, Simon DT, Berggren M.

Proc Natl Acad Sci U S A. 2017 May 2;114(18):4597-4602. doi: 10.1073/pnas.1617758114. Epub 2017 Apr 18.

33.

Altered expression of maize PLASTOCHRON1 enhances biomass and seed yield by extending cell division duration.

Sun X, Cahill J, Van Hautegem T, Feys K, Whipple C, Novák O, Delbare S, Versteele C, Demuynck K, De Block J, Storme V, Claeys H, Van Lijsebettens M, Coussens G, Ljung K, De Vliegher A, Muszynski M, Inzé D, Nelissen H.

Nat Commun. 2017 Mar 16;8:14752. doi: 10.1038/ncomms14752.

34.

Zooming In on Plant Hormone Analysis: Tissue- and Cell-Specific Approaches.

Novák O, Napier R, Ljung K.

Annu Rev Plant Biol. 2017 Apr 28;68:323-348. doi: 10.1146/annurev-arplant-042916-040812. Epub 2017 Feb 10. Review.

PMID:
28226234
35.

The Arabidopsis bZIP11 transcription factor links low-energy signalling to auxin-mediated control of primary root growth.

Weiste C, Pedrotti L, Selvanayagam J, Muralidhara P, Fröschel C, Novák O, Ljung K, Hanson J, Dröge-Laser W.

PLoS Genet. 2017 Feb 3;13(2):e1006607. doi: 10.1371/journal.pgen.1006607. eCollection 2017 Feb.

36.

Contrasting patterns of cytokinins between years in senescing aspen leaves.

Edlund E, Novak O, Karady M, Ljung K, Jansson S.

Plant Cell Environ. 2017 May;40(5):622-634. doi: 10.1111/pce.12899. Epub 2017 Mar 27.

PMID:
28042677
37.

The PLETHORA Gene Regulatory Network Guides Growth and Cell Differentiation in Arabidopsis Roots.

Santuari L, Sanchez-Perez GF, Luijten M, Rutjens B, Terpstra I, Berke L, Gorte M, Prasad K, Bao D, Timmermans-Hereijgers JL, Maeo K, Nakamura K, Shimotohno A, Pencik A, Novak O, Ljung K, van Heesch S, de Bruijn E, Cuppen E, Willemsen V, Mähönen AP, Lukowitz W, Snel B, de Ridder D, Scheres B, Heidstra R.

Plant Cell. 2016 Dec;28(12):2937-2951. doi: 10.1105/tpc.16.00656. Epub 2016 Dec 5.

38.

SHADE AVOIDANCE 4 Is Required for Proper Auxin Distribution in the Hypocotyl.

Ge Y, Yan F, Zourelidou M, Wang M, Ljung K, Fastner A, Hammes UZ, Di Donato M, Geisler M, Schwechheimer C, Tao Y.

Plant Physiol. 2017 Jan;173(1):788-800. doi: 10.1104/pp.16.01491. Epub 2016 Nov 21.

39.
40.

cis-Cinnamic Acid Is a Novel, Natural Auxin Efflux Inhibitor That Promotes Lateral Root Formation.

Steenackers W, Klíma P, Quareshy M, Cesarino I, Kumpf RP, Corneillie S, Araújo P, Viaene T, Goeminne G, Nowack MK, Ljung K, Friml J, Blakeslee JJ, Novák O, Zažímalová E, Napier R, Boerjan W, Vanholme B.

Plant Physiol. 2017 Jan;173(1):552-565. doi: 10.1104/pp.16.00943. Epub 2016 Nov 11.

41.

Corrigendum: The epidermis coordinates auxin-induced stem growth in response to shade.

Procko C, Burko Y, Jaillais Y, Ljung K, Long JA, Chory J.

Genes Dev. 2016 Sep 1;30(17):2018. doi: 10.1101/gad.290544.116. No abstract available.

42.

Dynamic regulation of auxin oxidase and conjugating enzymes AtDAO1 and GH3 modulates auxin homeostasis.

Mellor N, Band LR, Pěnčík A, Novák O, Rashed A, Holman T, Wilson MH, Voß U, Bishopp A, King JR, Ljung K, Bennett MJ, Owen MR.

Proc Natl Acad Sci U S A. 2016 Sep 27;113(39):11022-7. doi: 10.1073/pnas.1604458113. Epub 2016 Sep 20.

43.

Dioxygenase-encoding AtDAO1 gene controls IAA oxidation and homeostasis in Arabidopsis.

Porco S, Pěnčík A, Rashed A, Voß U, Casanova-Sáez R, Bishopp A, Golebiowska A, Bhosale R, Swarup R, Swarup K, Peňáková P, Novák O, Staswick P, Hedden P, Phillips AL, Vissenberg K, Bennett MJ, Ljung K.

Proc Natl Acad Sci U S A. 2016 Sep 27;113(39):11016-21. doi: 10.1073/pnas.1604375113. Epub 2016 Sep 20.

44.

The Allelochemical MDCA Inhibits Lignification and Affects Auxin Homeostasis.

Steenackers W, Cesarino I, Klíma P, Quareshy M, Vanholme R, Corneillie S, Kumpf RP, Van de Wouwer D, Ljung K, Goeminne G, Novák O, Zažímalová E, Napier R, Boerjan W, Vanholme B.

Plant Physiol. 2016 Oct;172(2):874-888. Epub 2016 Aug 9.

45.

The epidermis coordinates auxin-induced stem growth in response to shade.

Procko C, Burko Y, Jaillais Y, Ljung K, Long JA, Chory J.

Genes Dev. 2016 Jul 1;30(13):1529-41. doi: 10.1101/gad.283234.116. Erratum in: Genes Dev. 2016 Sep 1;30(17):2018.

46.

Local auxin metabolism regulates environment-induced hypocotyl elongation.

Zheng Z, Guo Y, Novák O, Chen W, Ljung K, Noel JP, Chory J.

Nat Plants. 2016 Mar 21;2:16025. doi: 10.1038/nplants.2016.25.

47.

The Effects of High Steady State Auxin Levels on Root Cell Elongation in Brachypodium.

Pacheco-Villalobos D, Díaz-Moreno SM, van der Schuren A, Tamaki T, Kang YH, Gujas B, Novak O, Jaspert N, Li Z, Wolf S, Oecking C, Ljung K, Bulone V, Hardtke CS.

Plant Cell. 2016 May;28(5):1009-24. doi: 10.1105/tpc.15.01057. Epub 2016 May 5.

48.

Connective Auxin Transport in the Shoot Facilitates Communication between Shoot Apices.

Bennett T, Hines G, van Rongen M, Waldie T, Sawchuk MG, Scarpella E, Ljung K, Leyser O.

PLoS Biol. 2016 Apr 27;14(4):e1002446. doi: 10.1371/journal.pbio.1002446. eCollection 2016 Apr.

49.

Quantitative Auxin Metabolite Profiling Using Stable Isotope Dilution UHPLC-MS/MS.

Novák O, Pěnčík A, Blahoušek O, Ljung K.

Curr Protoc Plant Biol. 2016 Mar;1(2):419-430. doi: 10.1002/cppb.20028.

PMID:
30775860
50.

Cryptochromes Interact Directly with PIFs to Control Plant Growth in Limiting Blue Light.

Pedmale UV, Huang SC, Zander M, Cole BJ, Hetzel J, Ljung K, Reis PAB, Sridevi P, Nito K, Nery JR, Ecker JR, Chory J.

Cell. 2016 Jan 14;164(1-2):233-245. doi: 10.1016/j.cell.2015.12.018. Epub 2015 Dec 24.

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