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Items: 1 to 50 of 208

1.

Interaction of SNARE Mimetic Peptides with Lipid bilayers: Effects of Secondary Structure, Bilayer Composition and Lipid Anchoring.

Wagle S, Georgiev VN, Robinson T, Dimova R, Lipowsky R, Grafmüller A.

Sci Rep. 2019 May 22;9(1):7708. doi: 10.1038/s41598-019-43418-w.

2.

Optimizing the dynamics of protein expression.

Trösemeier JH, Rudorf S, Loessner H, Hofner B, Reuter A, Schulenborg T, Koch I, Bekeredjian-Ding I, Lipowsky R, Kamp C.

Sci Rep. 2019 May 17;9(1):7511. doi: 10.1038/s41598-019-43857-5.

3.

Bilayer Membranes with Frequent Flip-Flops Have Tensionless Leaflets.

Miettinen MS, Lipowsky R.

Nano Lett. 2019 Aug 14;19(8):5011-5016. doi: 10.1021/acs.nanolett.9b01239. Epub 2019 Jul 5.

PMID:
31056917
4.

Giant Vesicles Encapsulating Aqueous Two-Phase Systems: From Phase Diagrams to Membrane Shape Transformations.

Liu Y, Lipowsky R, Dimova R.

Front Chem. 2019 Apr 9;7:213. doi: 10.3389/fchem.2019.00213. eCollection 2019. Review.

5.

Force-Dependent Unbinding Rate of Molecular Motors from Stationary Optical Trap Data.

Berger F, Klumpp S, Lipowsky R.

Nano Lett. 2019 Apr 10;19(4):2598-2602. doi: 10.1021/acs.nanolett.9b00417. Epub 2019 Mar 13.

PMID:
30835477
6.

Force sharing and force generation by two teams of elastically coupled molecular motors.

Uçar MC, Lipowsky R.

Sci Rep. 2019 Jan 24;9(1):454. doi: 10.1038/s41598-018-37126-0.

7.

The 2018 biomembrane curvature and remodeling roadmap.

Bassereau P, Jin R, Baumgart T, Deserno M, Dimova R, Frolov VA, Bashkirov PV, Grubmüller H, Jahn R, Risselada HJ, Johannes L, Kozlov MM, Lipowsky R, Pucadyil TJ, Zeno WF, Stachowiak JC, Stamou D, Breuer A, Lauritsen L, Simon C, Sykes C, Voth GA, Weikl TR.

J Phys D Appl Phys. 2018 Aug;51(34). pii: 343001. doi: 10.1088/1361-6463/aacb98. Epub 2018 Jul 20.

8.

Nanodroplets at Membranes Create Tight-Lipped Membrane Necks via Negative Line Tension.

Satarifard V, Grafmüller A, Lipowsky R.

ACS Nano. 2018 Dec 26;12(12):12424-12435. doi: 10.1021/acsnano.8b06634. Epub 2018 Dec 14.

9.

Asymmetric Ionic Conditions Generate Large Membrane Curvatures.

Karimi M, Steinkühler J, Roy D, Dasgupta R, Lipowsky R, Dimova R.

Nano Lett. 2018 Dec 12;18(12):7816-7821. doi: 10.1021/acs.nanolett.8b03584. Epub 2018 Nov 28.

PMID:
30456959
10.

A molecular dynamics model for glycosylphosphatidyl-inositol anchors: "flop down" or "lollipop"?

Banerjee P, Wehle M, Lipowsky R, Santer M.

Phys Chem Chem Phys. 2018 Nov 28;20(46):29314-29324. doi: 10.1039/c8cp04059a.

PMID:
30444244
11.

Trimeric coiled coils expand the range of strength, toughness and dynamics of coiled coil motifs under shear.

Bergues-Pupo AE, Blank KG, Lipowsky R, Vila Verde A.

Phys Chem Chem Phys. 2018 Nov 28;20(46):29105-29115. doi: 10.1039/c8cp04896g.

PMID:
30426982
12.

Corrigendum: Decomposition of time-dependent fluorescence signals reveals codon-specific kinetics of protein synthesis.

Haase N, Holtkamp W, Lipowsky R, Rodnina M, Rudorf S.

Nucleic Acids Res. 2018 Dec 14;46(22):12186-12187. doi: 10.1093/nar/gky1101. No abstract available.

13.

Lipids with bulky head groups generate large membrane curvatures by small compositional asymmetries.

Sreekumari A, Lipowsky R.

J Chem Phys. 2018 Aug 28;149(8):084901. doi: 10.1063/1.5038427.

PMID:
30193489
14.

Presynaptic Biogenesis Requires Axonal Transport of Lysosome-Related Vesicles.

Vukoja A, Rey U, Petzoldt AG, Ott C, Vollweiter D, Quentin C, Puchkov D, Reynolds E, Lehmann M, Hohensee S, Rosa S, Lipowsky R, Sigrist SJ, Haucke V.

Neuron. 2018 Sep 19;99(6):1216-1232.e7. doi: 10.1016/j.neuron.2018.08.004. Epub 2018 Aug 30.

PMID:
30174114
15.

Domes and cones: Adhesion-induced fission of membranes by ESCRT proteins.

Agudo-Canalejo J, Lipowsky R.

PLoS Comput Biol. 2018 Aug 21;14(8):e1006422. doi: 10.1371/journal.pcbi.1006422. eCollection 2018 Aug.

16.

Area Increase and Budding in Giant Vesicles Triggered by Light: Behind the Scene.

Georgiev VN, Grafmüller A, Bléger D, Hecht S, Kunstmann S, Barbirz S, Lipowsky R, Dimova R.

Adv Sci (Weinh). 2018 Jun 5;5(8):1800432. doi: 10.1002/advs.201800432. eCollection 2018 Aug.

17.

Decomposition of time-dependent fluorescence signals reveals codon-specific kinetics of protein synthesis.

Haase N, Holtkamp W, Lipowsky R, Rodnina M, Rudorf S.

Nucleic Acids Res. 2018 Dec 14;46(22):e130. doi: 10.1093/nar/gky740. Erratum in: Nucleic Acids Res. 2018 Dec 14;46(22):12186-12187.

18.

Charged giant unilamellar vesicles prepared by electroformation exhibit nanotubes and transbilayer lipid asymmetry.

Steinkühler J, De Tillieux P, Knorr RL, Lipowsky R, Dimova R.

Sci Rep. 2018 Aug 7;8(1):11838. doi: 10.1038/s41598-018-30286-z.

19.

Molecular mechanics of coiled coils loaded in the shear geometry.

Goktas M, Luo C, Sullan RMA, Bergues-Pupo AE, Lipowsky R, Vila Verde A, Blank KG.

Chem Sci. 2018 Apr 23;9(20):4610-4621. doi: 10.1039/c8sc01037d. eCollection 2018 May 28.

20.

Membrane fluctuations and acidosis regulate cooperative binding of 'marker of self' protein CD47 with the macrophage checkpoint receptor SIRPα.

Steinkühler J, Różycki B, Alvey C, Lipowsky R, Weikl TR, Dimova R, Discher DE.

J Cell Sci. 2018 Jul 16;132(4). pii: jcs216770. doi: 10.1242/jcs.216770.

21.

The glycolipid GM1 reshapes asymmetric biomembranes and giant vesicles by curvature generation.

Dasgupta R, Miettinen MS, Fricke N, Lipowsky R, Dimova R.

Proc Natl Acad Sci U S A. 2018 May 29;115(22):5756-5761. doi: 10.1073/pnas.1722320115. Epub 2018 May 14.

22.

MaxSynBio: Avenues Towards Creating Cells from the Bottom Up.

Schwille P, Spatz J, Landfester K, Bodenschatz E, Herminghaus S, Sourjik V, Erb TJ, Bastiaens P, Lipowsky R, Hyman A, Dabrock P, Baret JC, Vidakovic-Koch T, Bieling P, Dimova R, Mutschler H, Robinson T, Tang TD, Wegner S, Sundmacher K.

Angew Chem Int Ed Engl. 2018 Oct 8;57(41):13382-13392. doi: 10.1002/anie.201802288. Epub 2018 Sep 17. Review.

PMID:
29749673
23.

Membrane Nanotubes Increase the Robustness of Giant Vesicles.

Bhatia T, Agudo-Canalejo J, Dimova R, Lipowsky R.

ACS Nano. 2018 May 22;12(5):4478-4485. doi: 10.1021/acsnano.8b00640. Epub 2018 Apr 16.

24.

The Conserved ESCRT-III Machinery Participates in the Phagocytosis of Entamoeba histolytica.

Avalos-Padilla Y, Knorr RL, Javier-Reyna R, García-Rivera G, Lipowsky R, Dimova R, Orozco E.

Front Cell Infect Microbiol. 2018 Mar 1;8:53. doi: 10.3389/fcimb.2018.00053. eCollection 2018.

25.

Response of Membranes and Vesicles to Capillary Forces Arising from Aqueous Two-Phase Systems and Water-in-Water Droplets.

Lipowsky R.

J Phys Chem B. 2018 Apr 5;122(13):3572-3586. doi: 10.1021/acs.jpcb.7b10783. Epub 2018 Feb 21.

26.

Sequential bottom-up assembly of mechanically stabilized synthetic cells by microfluidics.

Weiss M, Frohnmayer JP, Benk LT, Haller B, Janiesch JW, Heitkamp T, Börsch M, Lira RB, Dimova R, Lipowsky R, Bodenschatz E, Baret JC, Vidakovic-Koch T, Sundmacher K, Platzman I, Spatz JP.

Nat Mater. 2018 Jan;17(1):89-96. doi: 10.1038/nmat5005. Epub 2017 Oct 16.

PMID:
29035355
27.

Erratum: "Membrane curvature generated by asymmetric depletion layers of ions, small molecules, and nanoparticles" [J. Chem. Phys. 145, 074117 (2016)].

Różycki B, Lipowsky R.

J Chem Phys. 2017 Mar 14;146(10):109901. doi: 10.1063/1.4978679. No abstract available.

PMID:
28298093
28.

Uniform and Janus-like nanoparticles in contact with vesicles: energy landscapes and curvature-induced forces.

Agudo-Canalejo J, Lipowsky R.

Soft Matter. 2017 Mar 15;13(11):2155-2173. doi: 10.1039/c6sm02796b.

PMID:
28229148
29.

Tug-of-war between two elastically coupled molecular motors: a case study on force generation and force balance.

Uçar MC, Lipowsky R.

Soft Matter. 2017 Jan 4;13(2):328-344. doi: 10.1039/c6sm01853j.

PMID:
27910992
30.

Modulating Vesicle Adhesion by Electric Fields.

Steinkühler J, Agudo-Canalejo J, Lipowsky R, Dimova R.

Biophys J. 2016 Oct 4;111(7):1454-1464. doi: 10.1016/j.bpj.2016.08.029.

31.

Membrane curvature generated by asymmetric depletion layers of ions, small molecules, and nanoparticles.

Różycki B, Lipowsky R.

J Chem Phys. 2016 Aug 21;145(7):074117. doi: 10.1063/1.4960772. Erratum in: J Chem Phys. 2017 Mar 14;146(10):109901.

PMID:
27544097
32.

Stabilization of membrane necks by adhesive particles, substrate surfaces, and constriction forces.

Agudo-Canalejo J, Lipowsky R.

Soft Matter. 2016 Oct 21;12(39):8155-8166. Epub 2016 Aug 10.

PMID:
27508427
33.
34.

Solution Asymmetry and Salt Expand Fluid-Fluid Coexistence Regions of Charged Membranes.

Kubsch B, Robinson T, Lipowsky R, Dimova R.

Biophys J. 2016 Jun 21;110(12):2581-2584. doi: 10.1016/j.bpj.2016.05.028. Epub 2016 Jun 7.

35.

Molar mass fractionation in aqueous two-phase polymer solutions of dextran and poly(ethylene glycol).

Zhao Z, Li Q, Ji X, Dimova R, Lipowsky R, Liu Y.

J Chromatogr A. 2016 Jun 24;1452:107-15. doi: 10.1016/j.chroma.2016.04.075. Epub 2016 Apr 28.

PMID:
27155914
36.

Photosensitive Peptidomimetic for Light-Controlled, Reversible DNA Compaction.

Schimka S, Santer S, Mujkić-Ninnemann NM, Bléger D, Hartmann L, Wehle M, Lipowsky R, Santer M.

Biomacromolecules. 2016 Jun 13;17(6):1959-68. doi: 10.1021/acs.biomac.6b00052. Epub 2016 May 9.

PMID:
27030485
37.

Binding kinetics of membrane-anchored receptors and ligands: Molecular dynamics simulations and theory.

Hu J, Xu GK, Lipowsky R, Weikl TR.

J Chem Phys. 2015 Dec 28;143(24):243137. doi: 10.1063/1.4936135.

PMID:
26723622
38.

Binding constants of membrane-anchored receptors and ligands: A general theory corroborated by Monte Carlo simulations.

Xu GK, Hu J, Lipowsky R, Weikl TR.

J Chem Phys. 2015 Dec 28;143(24):243136. doi: 10.1063/1.4936134.

PMID:
26723621
39.

Solvent-shared pairs of densely charged ions induce intense but short-range supra-additive slowdown of water rotation.

Vila Verde A, Santer M, Lipowsky R.

Phys Chem Chem Phys. 2016 Jan 21;18(3):1918-30. doi: 10.1039/c5cp05726d. Epub 2015 Dec 21.

PMID:
26687290
40.

Association-dissociation process with aging subunits: Recursive solution.

Niedermayer T, Lipowsky R.

Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Nov;92(5):052137. doi: 10.1103/PhysRevE.92.052137. Epub 2015 Nov 25.

PMID:
26651676
41.

Patterns of Flexible Nanotubes Formed by Liquid-Ordered and Liquid-Disordered Membranes.

Liu Y, Agudo-Canalejo J, Grafmüller A, Dimova R, Lipowsky R.

ACS Nano. 2016 Jan 26;10(1):463-74. doi: 10.1021/acsnano.5b05377. Epub 2015 Nov 30.

42.

The role of membrane curvature for the wrapping of nanoparticles.

Bahrami AH, Lipowsky R, Weikl TR.

Soft Matter. 2016 Jan 14;12(2):581-7. doi: 10.1039/c5sm01793a. Epub 2015 Oct 27.

PMID:
26506073
43.

Autophagosome closure requires membrane scission.

Knorr RL, Lipowsky R, Dimova R.

Autophagy. 2015 Nov 2;11(11):2134-2137. doi: 10.1080/15548627.2015.1091552.

44.

Adhesive Nanoparticles as Local Probes of Membrane Curvature.

Agudo-Canalejo J, Lipowsky R.

Nano Lett. 2015 Oct 14;15(10):7168-73. doi: 10.1021/acs.nanolett.5b03475. Epub 2015 Oct 5.

45.

Protein Synthesis in E. coli: Dependence of Codon-Specific Elongation on tRNA Concentration and Codon Usage.

Rudorf S, Lipowsky R.

PLoS One. 2015 Aug 13;10(8):e0134994. doi: 10.1371/journal.pone.0134994. eCollection 2015.

46.

Critical particle sizes for the engulfment of nanoparticles by membranes and vesicles with bilayer asymmetry.

Agudo-Canalejo J, Lipowsky R.

ACS Nano. 2015;9(4):3704-20. doi: 10.1021/acsnano.5b01285. Epub 2015 Apr 9.

PMID:
25840649
47.

External forces influence the elastic coupling effects during cargo transport by molecular motors.

Berger F, Keller C, Klumpp S, Lipowsky R.

Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Feb;91(2):022701. Epub 2015 Feb 2.

PMID:
25768525
48.

Spontaneous curvature of bilayer membranes from molecular simulations: asymmetric lipid densities and asymmetric adsorption.

Różycki B, Lipowsky R.

J Chem Phys. 2015 Feb 7;142(5):054101. doi: 10.1063/1.4906149.

PMID:
25662630
49.

Membrane morphology is actively transformed by covalent binding of the protein Atg8 to PE-lipids.

Knorr RL, Nakatogawa H, Ohsumi Y, Lipowsky R, Baumgart T, Dimova R.

PLoS One. 2014 Dec 18;9(12):e115357. doi: 10.1371/journal.pone.0115357. eCollection 2014.

50.

Cell rigidity and shape override CD47's "self"-signaling in phagocytosis by hyperactivating myosin-II.

Sosale NG, Rouhiparkouhi T, Bradshaw AM, Dimova R, Lipowsky R, Discher DE.

Blood. 2015 Jan 15;125(3):542-52. doi: 10.1182/blood-2014-06-585299. Epub 2014 Nov 19.

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