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Items: 1 to 50 of 362

1.

Waterpipe smoking as a public health risk: Potential risk for transmission of MERS-CoV.

Alagaili AN, Briese T, Amor NMS, Mohammed OB, Lipkin WI.

Saudi J Biol Sci. 2019 Jul;26(5):938-941. doi: 10.1016/j.sjbs.2018.05.006. Epub 2018 May 3.

PMID:
31303822
2.

Maternal fever during pregnancy and offspring attention deficit hyperactivity disorder.

Gustavson K, Ask H, Ystrom E, Stoltenberg C, Lipkin WI, Surén P, Håberg SE, Magnus P, Knudsen GP, Eilertsen E, Bresnahan M, Aase H, Mjaaland S, Susser ES, Hornig M, Reichborn-Kjennerud T.

Sci Rep. 2019 Jul 2;9(1):9519. doi: 10.1038/s41598-019-45920-7.

3.

Virome capture sequencing does not identify active viral infection in unicentric and idiopathic multicentric Castleman disease.

Nabel CS, Sameroff S, Shilling D, Alapat D, Ruth JR, Kawano M, Sato Y, Stone K, Spetalen S, Valdivieso F, Feldman MD, Chadburn A, Fosså A, van Rhee F, Lipkin WI, Fajgenbaum DC.

PLoS One. 2019 Jun 26;14(6):e0218660. doi: 10.1371/journal.pone.0218660. eCollection 2019.

4.

Characterization of Stool Virome in Children Newly Diagnosed With Moderate to Severe Ulcerative Colitis.

Tokarz R, Hyams JS, Mack DR, Boyle B, Griffiths AM, LeLeiko NS, Sauer CG, Shah S, Markowitz J, Baker SS, Rosh J, Baldassano RN, Kugathasan S, Walters T, Tagliafierro T, Sameroff S, Lee B, Che X, Oleynik A, Denson LA, Lipkin WI.

Inflamm Bowel Dis. 2019 May 21. pii: izz099. doi: 10.1093/ibd/izz099. [Epub ahead of print]

PMID:
31112614
5.

Microbiome analysis of Ixodes scapularis ticks from New York and Connecticut.

Tokarz R, Tagliafierro T, Sameroff S, Cucura DM, Oleynik A, Che X, Jain K, Lipkin WI.

Ticks Tick Borne Dis. 2019 Jun;10(4):894-900. doi: 10.1016/j.ttbdis.2019.04.011. Epub 2019 Apr 15.

6.

A viral metagenomic survey identifies known and novel mammalian viruses in bats from Saudi Arabia.

Mishra N, Fagbo SF, Alagaili AN, Nitido A, Williams SH, Ng J, Lee B, Durosinlorun A, Garcia JA, Jain K, Kapoor V, Epstein JH, Briese T, Memish ZA, Olival KJ, Lipkin WI.

PLoS One. 2019 Apr 10;14(4):e0214227. doi: 10.1371/journal.pone.0214227. eCollection 2019.

7.

A Novel Orthohepadnavirus Identified in a Dead Maxwell's Duiker (Philantomba maxwellii) in Taï National Park, Côte d'Ivoire.

Gogarten JF, Ulrich M, Bhuva N, Garcia J, Jain K, Lee B, Löhrich T, Oleynik A, Couacy-Hymann E, Fuh Neba T, Mishra N, Briese T, Calvignac-Spencer S, Lipkin WI, Leendertz FH.

Viruses. 2019 Mar 19;11(3). pii: E279. doi: 10.3390/v11030279.

8.

DEvis: an R package for aggregation and visualization of differential expression data.

Price A, Caciula A, Guo C, Lee B, Morrison J, Rasmussen A, Lipkin WI, Jain K.

BMC Bioinformatics. 2019 Mar 4;20(1):110. doi: 10.1186/s12859-019-2702-z.

9.

Distinct Gut Virome Profile of Pregnant Women With Type 1 Diabetes in the ENDIA Study.

Wook Kim K, Allen DW, Briese T, Couper JJ, Barry SC, Colman PG, Cotterill AM, Davis EA, Giles LC, Harrison LC, Harris M, Haynes A, Horton JL, Isaacs SR, Jain K, Lipkin WI, Morahan G, Morbey C, Pang ICN, Papenfuss AT, Penno MAS, Sinnott RO, Soldatos G, Thomson RL, Vuillermin PJ, Wentworth JM, Wilkins MR, Rawlinson WD, Craig ME; ENDIA Study Group.

Open Forum Infect Dis. 2019 Jan 16;6(2):ofz025. doi: 10.1093/ofid/ofz025. eCollection 2019 Feb.

10.

Emergence of the East-Central-South-African genotype of Chikungunya virus in Brazil and the city of Rio de Janeiro may have occurred years before surveillance detection.

Souza TML, Vieira YR, Delatorre E, Barbosa-Lima G, Luiz RLF, Vizzoni A, Jain K, Miranda MM, Bhuva N, Gogarten JF, Ng J, Thakkar R, Calheiros AS, Monteiro APT, Bozza PT, Bozza FA, Tschoeke DA, Leomil L, Mendonça MCL, Rodrigues CDDS, Torres MC, Filippis AMB, Nogueira RMR, Thompson FL, Lemos C, Durovni B, Cerbino-Neto J, Morel CM, Lipkin WI, Mishra N.

Sci Rep. 2019 Feb 26;9(1):2760. doi: 10.1038/s41598-019-39406-9.

11.

Higher abundance of enterovirus A species in the gut of children with islet autoimmunity.

Kim KW, Horton JL, Pang CNI, Jain K, Leung P, Isaacs SR, Bull RA, Luciani F, Wilkins MR, Catteau J, Lipkin WI, Rawlinson WD, Briese T, Craig ME.

Sci Rep. 2019 Feb 11;9(1):1749. doi: 10.1038/s41598-018-38368-8.

12.

Interpreting New Evidence on Prenatal Infections and Mental Disorders.

Susser E, Bresnahan M, Lipkin WI.

Biol Psychiatry. 2019 Feb 15;85(4):285-286. doi: 10.1016/j.biopsych.2018.12.004. No abstract available.

PMID:
30665502
13.

Maternal prenatal Tdap not associated with autism development in the child.

Lipkin WI.

J Pediatr. 2019 Jan;204:320-323. doi: 10.1016/j.jpeds.2018.10.074. No abstract available.

PMID:
30579469
14.

Author Correction: The discovery of Bombali virus adds further support for bats as hosts of ebolaviruses.

Goldstein T, Anthony SJ, Gbakima A, Bird BH, Bangura J, Tremeau-Bravard A, Belaganahalli MN, Wells HL, Dhanota JK, Liang E, Grodus M, Jangra RK, DeJesus VA, Lasso G, Smith BR, Jambai A, Kamara BO, Kamara S, Bangura W, Monagin C, Shapira S, Johnson CK, Saylors K, Rubin EM, Chandran K, Lipkin WI, Mazet JAK.

Nat Microbiol. 2018 Dec;3(12):1486. doi: 10.1038/s41564-018-0315-3.

PMID:
30410089
15.

BacCapSeq: a Platform for Diagnosis and Characterization of Bacterial Infections.

Allicock OM, Guo C, Uhlemann AC, Whittier S, Chauhan LV, Garcia J, Price A, Morse SS, Mishra N, Briese T, Lipkin WI.

MBio. 2018 Oct 23;9(5). pii: e02007-18. doi: 10.1128/mBio.02007-18.

16.

Virome Analysis Reveals No Association of Head and Neck Vascular Anomalies with an Active Viral Infection.

Franke N, Bette M, Marquardt A, Briese T, Lipkin WI, Kurz C, Ehrenreich J, Mack E, Baying B, Beneš V, Rodepeter FR, Neff A, Teymoortash A, Eivazi B, Geisthoff U, Stuck BA, Bakowsky U, Mandic R.

In Vivo. 2018 Nov-Dec;32(6):1323-1331. doi: 10.21873/invivo.11382.

17.

Erratum for Williams et al., "Investigation of the Plasma Virome from Cases of Unexplained Febrile Illness in Tanzania from 2013 to 2014: a Comparative Analysis between Unbiased and VirCapSeq-VERT High-Throughput Sequencing Approaches".

Williams SH, Cordey S, Bhuva N, Laubscher F, Hartley MA, Boillat-Blanco N, Mbarack Z, Samaka J, Mlaganile T, Jain K, d'Acremont V, Kaiser L, Lipkin WI.

mSphere. 2018 Sep 19;3(5). pii: e00477-18. doi: 10.1128/mSphere.00477-18. No abstract available.

18.

Correction: miRNA independent hepacivirus variants suggest a strong evolutionary pressure to maintain miR-122 dependence.

Yu Y, Scheel TKH, Luna JM, Chung H, Nishiuchi E, Scull MA, Echeverría N, Ricardo-Lax I, Kapoor A, Lipkin WI, Divers TJ, Antczak DF, Tennant BC, Rice CM.

PLoS Pathog. 2018 Sep 17;14(9):e1007303. doi: 10.1371/journal.ppat.1007303. eCollection 2018 Sep.

19.

The discovery of Bombali virus adds further support for bats as hosts of ebolaviruses.

Goldstein T, Anthony SJ, Gbakima A, Bird BH, Bangura J, Tremeau-Bravard A, Belaganahalli MN, Wells HL, Dhanota JK, Liang E, Grodus M, Jangra RK, DeJesus VA, Lasso G, Smith BR, Jambai A, Kamara BO, Kamara S, Bangura W, Monagin C, Shapira S, Johnson CK, Saylors K, Rubin EM, Chandran K, Lipkin WI, Mazet JAK.

Nat Microbiol. 2018 Oct;3(10):1084-1089. doi: 10.1038/s41564-018-0227-2. Epub 2018 Aug 27. Erratum in: Nat Microbiol. 2018 Dec;3(12):1486.

20.

Investigation of the Plasma Virome from Cases of Unexplained Febrile Illness in Tanzania from 2013 to 2014: a Comparative Analysis between Unbiased and VirCapSeq-VERT High-Throughput Sequencing Approaches.

Williams SH, Cordey S, Bhuva N, Laubscher F, Hartley MA, Boillat-Blanco N, Mbarack Z, Samaka J, Mlaganile T, Jain K, d'Acremont V, Kaiser L, Lipkin WI.

mSphere. 2018 Aug 22;3(4). pii: e00311-18. doi: 10.1128/mSphere.00311-18. Erratum in: mSphere. 2018 Sep 19;3(5):.

21.

Precision Surveillance for Viral Respiratory Pathogens: Virome Capture Sequencing for the Detection and Genomic Characterization of Severe Acute Respiratory Infection in Uganda.

Cummings MJ, Tokarz R, Bakamutumaho B, Kayiwa J, Byaruhanga T, Owor N, Namagambo B, Wolf A, Mathema B, Lutwama JJ, Schluger NW, Lipkin WI, O'Donnell MR.

Clin Infect Dis. 2019 Mar 19;68(7):1118-1125. doi: 10.1093/cid/ciy656.

PMID:
30099510
22.

Insights into myalgic encephalomyelitis/chronic fatigue syndrome phenotypes through comprehensive metabolomics.

Nagy-Szakal D, Barupal DK, Lee B, Che X, Williams BL, Kahn EJR, Ukaigwe JE, Bateman L, Klimas NG, Komaroff AL, Levine S, Montoya JG, Peterson DL, Levin B, Hornig M, Fiehn O, Lipkin WI.

Sci Rep. 2018 Jul 3;8(1):10056. doi: 10.1038/s41598-018-28477-9.

23.

Gut microbiomes of wild great apes fluctuate seasonally in response to diet.

Hicks AL, Lee KJ, Couto-Rodriguez M, Patel J, Sinha R, Guo C, Olson SH, Seimon A, Seimon TA, Ondzie AU, Karesh WB, Reed P, Cameron KN, Lipkin WI, Williams BL.

Nat Commun. 2018 May 3;9(1):1786. doi: 10.1038/s41467-018-04204-w.

24.

Viral Diversity of House Mice in New York City.

Williams SH, Che X, Garcia JA, Klena JD, Lee B, Muller D, Ulrich W, Corrigan RM, Nichol S, Jain K, Lipkin WI.

MBio. 2018 Apr 17;9(2). pii: e01354-17. doi: 10.1128/mBio.01354-17.

25.

New York City House Mice (Mus musculus) as Potential Reservoirs for Pathogenic Bacteria and Antimicrobial Resistance Determinants.

Williams SH, Che X, Paulick A, Guo C, Lee B, Muller D, Uhlemann AC, Lowy FD, Corrigan RM, Lipkin WI.

MBio. 2018 Apr 17;9(2). pii: e00624-18. doi: 10.1128/mBio.00624-18.

26.

Identification of Novel Viruses in Amblyomma americanum, Dermacentor variabilis, and Ixodes scapularis Ticks.

Tokarz R, Sameroff S, Tagliafierro T, Jain K, Williams SH, Cucura DM, Rochlin I, Monzon J, Carpi G, Tufts D, Diuk-Wasser M, Brinkerhoff J, Lipkin WI.

mSphere. 2018 Mar 7;3(2). pii: e00614-17. doi: 10.1128/mSphere.00614-17. eCollection 2018 Mar-Apr.

27.

Diagnosis of Zika Virus Infection by Peptide Array and Enzyme-Linked Immunosorbent Assay.

Mishra N, Caciula A, Price A, Thakkar R, Ng J, Chauhan LV, Jain K, Che X, Espinosa DA, Montoya Cruz M, Balmaseda A, Sullivan EH, Patel JJ, Jarman RG, Rakeman JL, Egan CT, Reusken CBEM, Koopmans MPG, Harris E, Tokarz R, Briese T, Lipkin WI.

MBio. 2018 Mar 6;9(2). pii: e00095-18. doi: 10.1128/mBio.00095-18.

28.

A multiplex serologic platform for diagnosis of tick-borne diseases.

Tokarz R, Mishra N, Tagliafierro T, Sameroff S, Caciula A, Chauhan L, Patel J, Sullivan E, Gucwa A, Fallon B, Golightly M, Molins C, Schriefer M, Marques A, Briese T, Lipkin WI.

Sci Rep. 2018 Feb 16;8(1):3158. doi: 10.1038/s41598-018-21349-2.

29.

Highly Sensitive Virome Capture Sequencing Technique VirCapSeq-VERT Identifies Partial Noncoding Sequences but no Active Viral Infection in Cutaneous T-Cell Lymphoma.

Anderson ME, Nagy-Szakal D, Jain K, Patrone CC, Frattini MG, Lipkin WI, Geskin LJ.

J Invest Dermatol. 2018 Jul;138(7):1671-1673. doi: 10.1016/j.jid.2018.01.024. Epub 2018 Feb 7. No abstract available.

30.

New Parvovirus Associated with Serum Hepatitis in Horses after Inoculation of Common Biological Product.

Divers TJ, Tennant BC, Kumar A, McDonough S, Cullen J, Bhuva N, Jain K, Chauhan LS, Scheel TKH, Lipkin WI, Laverack M, Trivedi S, Srinivasa S, Beard L, Rice CM, Burbelo PD, Renshaw RW, Dubovi E, Kapoor A.

Emerg Infect Dis. 2018 Feb;24(2):303-310. doi: 10.3201/eid2402.171031.

31.

Rodent-Borne Bartonella Infection Varies According to Host Species Within and Among Cities.

Peterson AC, Ghersi BM, Alda F, Firth C, Frye MJ, Bai Y, Osikowicz LM, Riegel C, Lipkin WI, Kosoy MY, Blum MJ.

Ecohealth. 2017 Dec;14(4):771-782. doi: 10.1007/s10393-017-1291-4. Epub 2017 Nov 21.

PMID:
29164472
32.

Prenatal Exposure to Acetaminophen and Risk of ADHD.

Ystrom E, Gustavson K, Brandlistuen RE, Knudsen GP, Magnus P, Susser E, Davey Smith G, Stoltenberg C, Surén P, Håberg SE, Hornig M, Lipkin WI, Nordeng H, Reichborn-Kjennerud T.

Pediatrics. 2017 Nov;140(5). pii: e20163840. doi: 10.1542/peds.2016-3840.

33.

miRNA independent hepacivirus variants suggest a strong evolutionary pressure to maintain miR-122 dependence.

Yu Y, Scheel TKH, Luna JM, Chung H, Nishiuchi E, Scull MA, Echeverría N, Ricardo-Lax I, Kapoor A, Lipkin WI, Divers TJ, Antczak DF, Tennant BC, Rice CM.

PLoS Pathog. 2017 Oct 30;13(10):e1006694. doi: 10.1371/journal.ppat.1006694. eCollection 2017 Oct. Erratum in: PLoS Pathog. 2018 Sep 17;14(9):e1007303.

34.

Parvovirus B19 Infection in Children With Arterial Ischemic Stroke.

Fullerton HJ, Luna JM, Wintermark M, Hills NK, Tokarz R, Li Y, Glaser C, DeVeber GA, Lipkin WI, Elkind MSV; VIPS Investigators*.

Stroke. 2017 Oct;48(10):2875-2877. doi: 10.1161/STROKEAHA.117.018272. Epub 2017 Sep 1.

35.

Viral persistence, liver disease, and host response in a hepatitis C-like virus rat model.

Trivedi S, Murthy S, Sharma H, Hartlage AS, Kumar A, Gadi SV, Simmonds P, Chauhan LV, Scheel TKH, Billerbeck E, Burbelo PD, Rice CM, Lipkin WI, Vandegrift K, Cullen JM, Kapoor A.

Hepatology. 2018 Aug;68(2):435-448. doi: 10.1002/hep.29494. Epub 2018 May 21.

PMID:
28859226
36.

Characterization of Fitzroy River Virus and Serologic Evidence of Human and Animal Infection.

Johansen CA, Williams SH, Melville LF, Nicholson J, Hall RA, Bielefeldt-Ohmann H, Prow NA, Chidlow GR, Wong S, Sinha R, Williams DT, Lipkin WI, Smith DW.

Emerg Infect Dis. 2017 Aug;23(8):1289-1299. doi: 10.3201/eid2308.161440.

37.

Mouse models of acute and chronic hepacivirus infection.

Billerbeck E, Wolfisberg R, Fahnøe U, Xiao JW, Quirk C, Luna JM, Cullen JM, Hartlage AS, Chiriboga L, Ghoshal K, Lipkin WI, Bukh J, Scheel TKH, Kapoor A, Rice CM.

Science. 2017 Jul 14;357(6347):204-208. doi: 10.1126/science.aal1962.

38.

Epidemiological and Serological Investigation into the Role of Gestational Maternal Influenza Virus Infection and Autism Spectrum Disorders.

Mahic M, Che X, Susser E, Levin B, Reichborn-Kjennerud T, Magnus P, Stoltenberg C, Chauhan L, Briese T, Bresnahan M, Surén P, Hornig M, Mjaaland S, Lipkin WI.

mSphere. 2017 Jun 21;2(3). pii: e00159-17. doi: 10.1128/mSphere.00159-17. eCollection 2017 May-Jun.

39.

The influence of parental concern on the utility of autism diagnostic instruments.

Havdahl KA, Bishop SL, Surén P, Øyen AS, Lord C, Pickles A, von Tetzchner S, Schjølberg S, Gunnes N, Hornig M, Lipkin WI, Susser E, Bresnahan M, Magnus P, Stenberg N, Reichborn-Kjennerud T, Stoltenberg C.

Autism Res. 2017 Oct;10(10):1672-1686. doi: 10.1002/aur.1817. Epub 2017 Jun 22.

PMID:
28639396
40.

Global patterns in coronavirus diversity.

Anthony SJ, Johnson CK, Greig DJ, Kramer S, Che X, Wells H, Hicks AL, Joly DO, Wolfe ND, Daszak P, Karesh W, Lipkin WI, Morse SS; PREDICT Consortium, Mazet JAK, Goldstein T.

Virus Evol. 2017 Jun 12;3(1):vex012. doi: 10.1093/ve/vex012. eCollection 2017 Jan.

41.

Prenatal fever and autism risk.

Hornig M, Bresnahan MA, Che X, Schultz AF, Ukaigwe JE, Eddy ML, Hirtz D, Gunnes N, Lie KK, Magnus P, Mjaaland S, Reichborn-Kjennerud T, Schjølberg S, Øyen AS, Levin B, Susser ES, Stoltenberg C, Lipkin WI.

Mol Psychiatry. 2018 Mar;23(3):759-766. doi: 10.1038/mp.2017.119. Epub 2017 Jun 13.

42.

Complete genome sequence of T'Ho virus, a novel putative flavivirus from the Yucatan Peninsula of Mexico.

Briese T, Loroño-Pino MA, Garcia-Rejon JE, Farfan-Ale JA, Machain-Williams C, Dorman KS, Lipkin WI, Blitvich BJ.

Virol J. 2017 Jun 12;14(1):110. doi: 10.1186/s12985-017-0777-6.

43.

Viral Encephalitis of Unknown Cause: Current Perspective and Recent Advances.

Kennedy PGE, Quan PL, Lipkin WI.

Viruses. 2017 Jun 6;9(6). pii: E138. doi: 10.3390/v9060138. Review.

44.

Erratum for Briese et al., "Virome Capture Sequencing Enables Sensitive Viral Diagnosis and Comprehensive Virome Analysis".

Briese T, Kapoor A, Mishra N, Jain K, Kumar A, Jabado OJ, Lipkin WI.

MBio. 2017 May 16;8(3). pii: e00615-17. doi: 10.1128/mBio.00615-17. No abstract available.

45.

Global epidemiology of non-influenza RNA respiratory viruses: data gaps and a growing need for surveillance.

Tang JW, Lam TT, Zaraket H, Lipkin WI, Drews SJ, Hatchette TF, Heraud JM, Koopmans MP; INSPIRE investigators.

Lancet Infect Dis. 2017 Oct;17(10):e320-e326. doi: 10.1016/S1473-3099(17)30238-4. Epub 2017 Apr 28. Review. Erratum in: Lancet Infect Dis. 2017 Jul;17(7):689.

46.

Central Nervous System Infection with Borna Disease Virus Causes Kynurenine Pathway Dysregulation and Neurotoxic Quinolinic Acid Production.

Formisano S, Hornig M, Yaddanapudi K, Vasishtha M, Parsons LH, Briese T, Lipkin WI, Williams BL.

J Virol. 2017 Jun 26;91(14). pii: e00673-17. doi: 10.1128/JVI.00673-17. Print 2017 Jul 15.

47.

Fecal metagenomic profiles in subgroups of patients with myalgic encephalomyelitis/chronic fatigue syndrome.

Nagy-Szakal D, Williams BL, Mishra N, Che X, Lee B, Bateman L, Klimas NG, Komaroff AL, Levine S, Montoya JG, Peterson DL, Ramanan D, Jain K, Eddy ML, Hornig M, Lipkin WI.

Microbiome. 2017 Apr 26;5(1):44. doi: 10.1186/s40168-017-0261-y.

48.

Detection of Anaplasma phagocytophilum, Babesia microti, Borrelia burgdorferi, Borrelia miyamotoi, and Powassan Virus in Ticks by a Multiplex Real-Time Reverse Transcription-PCR Assay.

Tokarz R, Tagliafierro T, Cucura DM, Rochlin I, Sameroff S, Lipkin WI.

mSphere. 2017 Apr 19;2(2). pii: e00151-17. doi: 10.1128/mSphere.00151-17. eCollection 2017 Mar-Apr.

49.

Correction for Mahic et al., "Maternal Immunoreactivity to Herpes Simplex Virus 2 and Risk of Autism Spectrum Disorder in Male Offspring".

Mahic M, Mjaaland S, Bøvelstad HM, Gunnes N, Susser E, Bresnahan M, Øyen AS, Levin B, Che X, Hirtz D, Reichborn-Kjennerud T, Schjølberg S, Roth C, Magnus P, Stoltenberg C, Surén P, Hornig M, Lipkin WI.

mSphere. 2017 Apr 12;2(2). pii: e00154-17. doi: 10.1128/mSphere.00154-17. eCollection 2017 Mar-Apr.

50.

Reply to Magaret and Wald, "Autism Link to Herpes Simplex Virus 2 Antibody in Pregnancy Likely To Be Spurious".

Mahic M, Mjaaland S, Susser E, Bresnahan M, Che X, Levin B, Hornig M, Lipkin WI.

mSphere. 2017 Mar 29;2(2). pii: e00113-17. doi: 10.1128/mSphere.00113-17. eCollection 2017 Mar-Apr. No abstract available.

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