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Items: 46

1.

Heritability and genome-wide association study of benign prostatic hyperplasia (BPH) in the eMERGE network.

Hellwege JN, Stallings S, Torstenson ES, Carroll R, Borthwick KM, Brilliant MH, Crosslin D, Gordon A, Hripcsak G, Jarvik GP, Linneman JG, Devi P, Peissig PL, Sleiman PAM, Hakonarson H, Ritchie MD, Verma SS, Shang N, Denny JC, Roden DM, Velez Edwards DR, Edwards TL.

Sci Rep. 2019 Apr 15;9(1):6077. doi: 10.1038/s41598-019-42427-z.

2.

Probing the Virtual Proteome to Identify Novel Disease Biomarkers.

Mosley JD, Benson MD, Smith JG, Melander O, Ngo D, Shaffer CM, Ferguson JF, Herzig MS, McCarty CA, Chute CG, Jarvik GP, Gordon AS, Palmer MR, Crosslin DR, Larson EB, Carrell DS, Kullo IJ, Pacheco JA, Peissig PL, Brilliant MH, Kitchner TE, Linneman JG, Namjou B, Williams MS, Ritchie MD, Borthwick KM, Kiryluk K, Mentch FD, Sleiman PM, Karlson EW, Verma SS, Zhu Y, Vasan RS, Yang Q, Denny JC, Roden DM, Gerszten RE, Wang TJ.

Circulation. 2018 Nov 27;138(22):2469-2481. doi: 10.1161/CIRCULATIONAHA.118.036063.

PMID:
30571344
3.

Novel locus for atopic dermatitis in African Americans and replication in European Americans.

Almoguera B, Vazquez L, Mentch F, March ME, Connolly JJ, Peissig PL, Linneman JG, Plaza-Serón MDC, Pino-Yanes M, Burchard EG, Brilliant M, Sleiman P, Hakonarson H.

J Allergy Clin Immunol. 2019 Mar;143(3):1229-1231. doi: 10.1016/j.jaci.2018.10.038. Epub 2018 Nov 9. No abstract available.

PMID:
30414857
4.

A study paradigm integrating prospective epidemiologic cohorts and electronic health records to identify disease biomarkers.

Mosley JD, Feng Q, Wells QS, Van Driest SL, Shaffer CM, Edwards TL, Bastarache L, Wei WQ, Davis LK, McCarty CA, Thompson W, Chute CG, Jarvik GP, Gordon AS, Palmer MR, Crosslin DR, Larson EB, Carrell DS, Kullo IJ, Pacheco JA, Peissig PL, Brilliant MH, Linneman JG, Namjou B, Williams MS, Ritchie MD, Borthwick KM, Verma SS, Karnes JH, Weiss ST, Wang TJ, Stein CM, Denny JC, Roden DM.

Nat Commun. 2018 Aug 30;9(1):3522. doi: 10.1038/s41467-018-05624-4.

5.

Investigating the Genetic Architecture of the PR Interval Using Clinical Phenotypes.

Mosley JD, Shoemaker MB, Wells QS, Darbar D, Shaffer CM, Edwards TL, Bastarache L, McCarty CA, Thompson W, Chute CG, Jarvik GP, Crosslin DR, Larson EB, Kullo IJ, Pacheco JA, Peissig PL, Brilliant MH, Linneman JG, Witte JS, Denny JC, Roden DM.

Circ Cardiovasc Genet. 2017 Apr;10(2). pii: e001482. doi: 10.1161/CIRCGENETICS.116.001482.

6.

Comparison of Generic-to-Brand Switchback Rates Between Generic and Authorized Generic Drugs.

Hansen RA, Qian J, Berg R, Linneman J, Seoane-Vazquez E, Dutcher SK, Raofi S, Page CD, Peissig P.

Pharmacotherapy. 2017 Apr;37(4):429-437. doi: 10.1002/phar.1908. Epub 2017 Mar 20.

7.

Comparison of Outcomes Following a Switch From a Brand to an Authorized Versus Independent Generic Drug.

Hansen RA, Qian J, Berg RL, Linneman JG, Seoane-Vazquez E, Dutcher S, Raofi S, Page CD, Peissig PL.

Clin Pharmacol Ther. 2018 Feb;103(2):310-317. doi: 10.1002/cpt.591. Epub 2017 Oct 10.

8.

Performance of an electronic health record-based phenotype algorithm to identify community associated methicillin-resistant Staphylococcus aureus cases and controls for genetic association studies.

Jackson KL, Mbagwu M, Pacheco JA, Baldridge AS, Viox DJ, Linneman JG, Shukla SK, Peissig PL, Borthwick KM, Carrell DA, Bielinski SJ, Kirby JC, Denny JC, Mentch FD, Vazquez LM, Rasmussen-Torvik LJ, Kho AN.

BMC Infect Dis. 2016 Nov 17;16(1):684.

9.

Defining a Contemporary Ischemic Heart Disease Genetic Risk Profile Using Historical Data.

Mosley JD, van Driest SL, Wells QS, Shaffer CM, Edwards TL, Bastarache L, McCarty CA, Thompson W, Chute CG, Jarvik GP, Crosslin DR, Larson EB, Kullo IJ, Pacheco JA, Peissig PL, Brilliant MH, Linneman JG, Denny JC, Roden DM.

Circ Cardiovasc Genet. 2016 Dec;9(6):521-530. doi: 10.1161/CIRCGENETICS.116.001530. Epub 2016 Oct 25.

10.

Epistatic Gene-Based Interaction Analyses for Glaucoma in eMERGE and NEIGHBOR Consortium.

Verma SS, Cooke Bailey JN, Lucas A, Bradford Y, Linneman JG, Hauser MA, Pasquale LR, Peissig PL, Brilliant MH, McCarty CA, Haines JL, Wiggs JL, Vrabec TR, Tromp G, Ritchie MD; eMERGE Network; NEIGHBOR Consortium.

PLoS Genet. 2016 Sep 13;12(9):e1006186. doi: 10.1371/journal.pgen.1006186. eCollection 2016 Sep.

11.

Identification of Four Novel Loci in Asthma in European American and African American Populations.

Almoguera B, Vazquez L, Mentch F, Connolly J, Pacheco JA, Sundaresan AS, Peissig PL, Linneman JG, McCarty CA, Crosslin D, Carrell DS, Lingren T, Namjou-Khales B, Harley JB, Larson E, Jarvik GP, Brilliant M, Williams MS, Kullo IJ, Hysinger EB, Sleiman PM, Hakonarson H.

Am J Respir Crit Care Med. 2017 Feb 15;195(4):456-463. doi: 10.1164/rccm.201604-0861OC.

12.

Identification of genetic interaction networks via an evolutionary algorithm evolved Bayesian network.

Li R, Dudek SM, Kim D, Hall MA, Bradford Y, Peissig PL, Brilliant MH, Linneman JG, McCarty CA, Bao L, Ritchie MD.

BioData Min. 2016 May 10;9:18. doi: 10.1186/s13040-016-0094-4. eCollection 2016.

13.

ePhenotyping for Abdominal Aortic Aneurysm in the Electronic Medical Records and Genomics (eMERGE) Network: Algorithm Development and Konstanz Information Miner Workflow.

Borthwick KM, Smelser DT, Bock JA, Elmore JR, Ryer EJ, Ye Z, Pacheco JA, Carrell DS, Michalkiewicz M, Thompson WK, Pathak J, Bielinski SJ, Denny JC, Linneman JG, Peissig PL, Kho AN, Gottesman O, Parmar H, Kullo IJ, McCarty CA, Böttinger EP, Larson EB, Jarvik GP, Harley JB, Bajwa T, Franklin DP, Carey DJ, Kuivaniemi H, Tromp G.

Int J Biomed Data Min. 2015 Dec;4(1). pii: 113. Epub 2015 Jul 30.

14.

CMTR1 is associated with increased asthma exacerbations in patients taking inhaled corticosteroids.

Dahlin A, Denny J, Roden DM, Brilliant MH, Ingram C, Kitchner TE, Linneman JG, Shaffer CM, Weeke P, Xu H, Kubo M, Tamari M, Clemmer GL, Ziniti J, McGeachie MJ, Tantisira KG, Weiss ST, Wu AC.

Immun Inflamm Dis. 2015 Jul 14;3(4):350-9. doi: 10.1002/iid3.73. eCollection 2015 Dec.

15.

CYP2C19 and CES1 polymorphisms and efficacy of clopidogrel and aspirin dual antiplatelet therapy in patients with symptomatic intracranial atherosclerotic disease.

Hoh BL, Gong Y, McDonough CW, Waters MF, Royster AJ, Sheehan TO, Burkley B, Langaee TY, Mocco J, Zuckerman SL, Mummareddy N, Stephens ML 2nd, Ingram C, Shaffer CM, Denny JC, Brilliant MH, Kitchner TE, Linneman JG, Roden DM, Johnson JA.

J Neurosurg. 2016 Jun;124(6):1746-51. doi: 10.3171/2015.6.JNS15795. Epub 2015 Nov 20.

16.

A Robust e-Epidemiology Tool in Phenotyping Heart Failure with Differentiation for Preserved and Reduced Ejection Fraction: the Electronic Medical Records and Genomics (eMERGE) Network.

Bielinski SJ, Pathak J, Carrell DS, Takahashi PY, Olson JE, Larson NB, Liu H, Sohn S, Wells QS, Denny JC, Rasmussen-Torvik LJ, Pacheco JA, Jackson KL, Lesnick TG, Gullerud RE, Decker PA, Pereira NL, Ryu E, Dart RA, Peissig P, Linneman JG, Jarvik GP, Larson EB, Bock JA, Tromp GC, de Andrade M, Roger VL.

J Cardiovasc Transl Res. 2015 Nov;8(8):475-83. doi: 10.1007/s12265-015-9644-2. Epub 2015 Jul 21.

17.

A genome-wide association study identifies variants in KCNIP4 associated with ACE inhibitor-induced cough.

Mosley JD, Shaffer CM, Van Driest SL, Weeke PE, Wells QS, Karnes JH, Velez Edwards DR, Wei WQ, Teixeira PL, Bastarache L, Crawford DC, Li R, Manolio TA, Bottinger EP, McCarty CA, Linneman JG, Brilliant MH, Pacheco JA, Thompson W, Chisholm RL, Jarvik GP, Crosslin DR, Carrell DS, Baldwin E, Ralston J, Larson EB, Grafton J, Scrol A, Jouni H, Kullo IJ, Tromp G, Borthwick KM, Kuivaniemi H, Carey DJ, Ritchie MD, Bradford Y, Verma SS, Chute CG, Veluchamy A, Siddiqui MK, Palmer CN, Doney A, MahmoudPour SH, Maitland-van der Zee AH, Morris AD, Denny JC, Roden DM.

Pharmacogenomics J. 2016 Jun;16(3):231-7. doi: 10.1038/tpj.2015.51. Epub 2015 Jul 14.

18.

Electronic medical records and genomics (eMERGE) network exploration in cataract: several new potential susceptibility loci.

Ritchie MD, Verma SS, Hall MA, Goodloe RJ, Berg RL, Carrell DS, Carlson CS, Chen L, Crosslin DR, Denny JC, Jarvik G, Li R, Linneman JG, Pathak J, Peissig P, Rasmussen LV, Ramirez AH, Wang X, Wilke RA, Wolf WA, Torstenson ES, Turner SD, McCarty CA.

Mol Vis. 2014 Sep 19;20:1281-95. eCollection 2014.

19.

Latitudinal variation of a defensive symbiosis in the Bugula neritina (Bryozoa) sibling species complex.

Linneman J, Paulus D, Lim-Fong G, Lopanik NB.

PLoS One. 2014 Oct 2;9(9):e108783. doi: 10.1371/journal.pone.0108783. eCollection 2014.

20.

A polymorphism in HLA-G modifies statin benefit in asthma.

Naidoo D, Wu AC, Brilliant MH, Denny J, Ingram C, Kitchner TE, Linneman JG, McGeachie MJ, Roden DM, Shaffer CM, Shah A, Weeke P, Weiss ST, Xu H, Medina MW.

Pharmacogenomics J. 2015 Jun;15(3):272-7. doi: 10.1038/tpj.2014.55. Epub 2014 Sep 30.

21.

Asymmetry in noise-induced hearing loss: evaluation of two competing theories.

Berg RL, Pickett W, Linneman JG, Wood DJ, Marlenga B.

Noise Health. 2014 Mar-Apr;16(69):102-7. doi: 10.4103/1463-1741.132092.

22.

Development and validation of an electronic phenotyping algorithm for chronic kidney disease.

Nadkarni GN, Gottesman O, Linneman JG, Chase H, Berg RL, Farouk S, Nadukuru R, Lotay V, Ellis S, Hripcsak G, Peissig P, Weng C, Bottinger EP.

AMIA Annu Symp Proc. 2014 Nov 14;2014:907-16. eCollection 2014.

23.

Determinants of early-stage hearing loss among a cohort of young workers with 16-year follow-up.

Marlenga B, Berg RL, Linneman JG, Wood DJ, Kirkhorn SR, Pickett W.

Occup Environ Med. 2012 Jul;69(7):479-84. doi: 10.1136/oemed-2011-100464. Epub 2012 Mar 23.

PMID:
22447644
24.

Importance of multi-modal approaches to effectively identify cataract cases from electronic health records.

Peissig PL, Rasmussen LV, Berg RL, Linneman JG, McCarty CA, Waudby C, Chen L, Denny JC, Wilke RA, Pathak J, Carrell D, Kho AN, Starren JB.

J Am Med Inform Assoc. 2012 Mar-Apr;19(2):225-34. doi: 10.1136/amiajnl-2011-000456.

25.

Analyzing the heterogeneity and complexity of Electronic Health Record oriented phenotyping algorithms.

Conway M, Berg RL, Carrell D, Denny JC, Kho AN, Kullo IJ, Linneman JG, Pacheco JA, Peissig P, Rasmussen L, Weston N, Chute CG, Pathak J.

AMIA Annu Symp Proc. 2011;2011:274-83. Epub 2011 Oct 22.

26.

Cataract research using electronic health records.

Waudby CJ, Berg RL, Linneman JG, Rasmussen LV, Peissig PL, Chen L, McCarty CA.

BMC Ophthalmol. 2011 Nov 11;11:32. doi: 10.1186/1471-2415-11-32.

27.

Randomized trial of a hearing conservation intervention for rural students: long-term outcomes.

Marlenga B, Linneman JG, Pickett W, Wood DJ, Kirkhorn SR, Broste SK, Knobloch MJ, Berg RL.

Pediatrics. 2011 Nov;128(5):e1139-46. doi: 10.1542/peds.2011-0770. Epub 2011 Oct 10.

PMID:
21987700
28.

A long femur scan field does not alter proximal femur bone mineral density measurements by dual-energy X-ray absorptiometry.

McKiernan FE, Hocking J, Cournoyer S, Berg RL, Linneman J.

J Clin Densitom. 2011 Jul-Sep;14(3):354-8. doi: 10.1016/j.jocd.2011.04.004. Epub 2011 Jun 11.

PMID:
21652250
29.

Knowledge-driven multi-locus analysis reveals gene-gene interactions influencing HDL cholesterol level in two independent EMR-linked biobanks.

Turner SD, Berg RL, Linneman JG, Peissig PL, Crawford DC, Denny JC, Roden DM, McCarty CA, Ritchie MD, Wilke RA.

PLoS One. 2011 May 11;6(5):e19586. doi: 10.1371/journal.pone.0019586.

30.

Polyketide synthase pathways identified from a metagenomic library are derived from soil Acidobacteria.

Parsley LC, Linneman J, Goode AM, Becklund K, George I, Goodman RM, Lopanik NB, Liles MR.

FEMS Microbiol Ecol. 2011 Oct;78(1):176-87. doi: 10.1111/j.1574-6941.2011.01122.x. Epub 2011 May 23.

31.

The utility of BMD Z-score diagnostic thresholds for secondary causes of osteoporosis.

McKiernan FE, Berg RL, Linneman JG.

Osteoporos Int. 2011 Apr;22(4):1069-77. doi: 10.1007/s00198-010-1307-1. Epub 2010 Jun 9.

PMID:
20533026
32.

Quantification of the clinical modifiers impacting high-density lipoprotein cholesterol in the community: Personalized Medicine Research Project.

Wilke RA, Berg RL, Linneman JG, Peissig P, Starren J, Ritchie MD, McCarty CA.

Prev Cardiol. 2010 Spring;13(2):63-8. doi: 10.1111/j.1751-7141.2009.00055.x.

33.

Hearing conservation program for agricultural students: short-term outcomes from a cluster-randomized trial with planned long-term follow-up.

Berg RL, Pickett W, Fitz-Randolph M, Broste SK, Knobloch MJ, Wood DJ, Kirkhorn SR, Linneman JG, Marlenga B.

Prev Med. 2009 Dec;49(6):546-52. doi: 10.1016/j.ypmed.2009.09.020. Epub 2009 Oct 2.

PMID:
19800914
34.

Use of an electronic medical record to characterize cases of intermediate statin-induced muscle toxicity.

Mareedu RK, Modhia FM, Kanin EI, Linneman JG, Kitchner T, McCarty CA, Krauss RM, Wilke RA.

Prev Cardiol. 2009 Spring;12(2):88-94. doi: 10.1111/j.1751-7141.2009.00028.x.

35.

Hospitalized head injuries in agricultural settings: who are the vulnerable groups?

Pickett W, Dostaler S, Berg RL, Brison RJ, Linneman JG, Marlenga B.

Accid Anal Prev. 2008 Nov;40(6):1943-8. doi: 10.1016/j.aap.2008.08.005. Epub 2008 Sep 2.

PMID:
19068298
36.

Characterization of low-density lipoprotein cholesterol-lowering efficacy for atorvastatin in a population-based DNA biorepository.

Wilke RA, Berg RL, Linneman JG, Zhao C, McCarty CA, Krauss RM.

Basic Clin Pharmacol Toxicol. 2008 Oct;103(4):354-9. doi: 10.1111/j.1742-7843.2008.00291.x.

37.

Adult supervision and pediatric injuries in the agricultural worksite.

Morrongiello BA, Pickett W, Berg RL, Linneman JG, Brison RJ, Marlenga B.

Accid Anal Prev. 2008 May;40(3):1149-56. doi: 10.1016/j.aap.2007.12.007. Epub 2008 Jan 31.

PMID:
18460383
38.

A new approach to understanding pediatric farm injuries.

Morrongiello BA, Marlenga B, Berg R, Linneman J, Pickett W.

Soc Sci Med. 2007 Oct;65(7):1364-71. Epub 2007 Jun 21.

PMID:
17583403
39.

Pediatric fall injuries in agricultural settings: a new look at a common injury control problem.

Pickett W, Dostaler S, Berg RL, Linneman JG, Brison RJ, Marlenga B.

J Occup Environ Med. 2007 Apr;49(4):461-8.

PMID:
17426530
41.

Changing the child labor laws for agriculture: impact on injury.

Marlenga B, Berg RL, Linneman JG, Brison RJ, Pickett W.

Am J Public Health. 2007 Feb;97(2):276-82. Epub 2006 Dec 28.

42.

Fatal agricultural injuries in preschool children: risks, injury patterns and strategies for prevention.

Brison RJ, Pickett W, Berg RL, Linneman J, Zentner J, Marlenga B.

CMAJ. 2006 Jun 6;174(12):1723-6.

43.

Evaluation of a policy to reduce youth tractor crashes on public roads.

Marlenga B, Doty BC, Berg RL, Linneman JG.

Inj Prev. 2006 Feb;12(1):46-51.

44.

Efficacy of the influenza vaccine in patients with malignant lymphoma.

Mazza JJ, Yale SH, Arrowood JR, Reynolds CE, Glurich I, Chyou PH, Linneman JG, Reed KD.

Clin Med Res. 2005 Nov;3(4):214-20.

45.

Pediatric farm injuries involving non-working children injured by a farm work hazard: five priorities for primary prevention.

Pickett W, Brison RJ, Berg RL, Zentner J, Linneman J, Marlenga B.

Inj Prev. 2005 Feb;11(1):6-11.

46.

Evaluation of the North American Guidelines for Children's Agricultural Tasks using a case series of injuries.

Marlenga B, Brison RJ, Berg RL, Zentner J, Linneman J, Pickett W.

Inj Prev. 2004 Dec;10(6):350-7.

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