Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 31

1.

Quantitative molecular diagnostic assays of grain washes for Claviceps purpurea are correlated with visual determinations of ergot contamination.

Comte A, Gräfenhan T, Links MG, Hemmingsen SM, Dumonceaux TJ.

PLoS One. 2017 Mar 3;12(3):e0173495. doi: 10.1371/journal.pone.0173495. eCollection 2017.

2.

Enrichment and identification of biosurfactant-producing oil field microbiota utilizing electron acceptors other than oxygen and nitrate.

Kryachko Y, Semler D, Vogrinetz J, Lemke M, Links MG, McCarthy EL, Haug B, Hemmingsen SM.

J Biotechnol. 2016 Aug 10;231:9-15. doi: 10.1016/j.jbiotec.2016.05.014. Epub 2016 May 19.

PMID:
27212608
3.

The compact genome of the plant pathogen Plasmodiophora brassicae is adapted to intracellular interactions with host Brassica spp.

Rolfe SA, Strelkov SE, Links MG, Clarke WE, Robinson SJ, Djavaheri M, Malinowski R, Haddadi P, Kagale S, Parkin IA, Taheri A, Borhan MH.

BMC Genomics. 2016 Mar 31;17:272. doi: 10.1186/s12864-016-2597-2.

4.

Big Data is changing the battle against infectious diseases.

Links MG.

Can Commun Dis Rep. 2015 Sep 3;41(9):215-217. eCollection 2015 Sep 3.

5.

A Study of the Vaginal Microbiome in Healthy Canadian Women Utilizing cpn60-Based Molecular Profiling Reveals Distinct Gardnerella Subgroup Community State Types.

Albert AY, Chaban B, Wagner EC, Schellenberg JJ, Links MG, van Schalkwyk J, Reid G, Hemmingsen SM, Hill JE, Money D; VOGUE Research Group.

PLoS One. 2015 Aug 12;10(8):e0135620. doi: 10.1371/journal.pone.0135620. eCollection 2015.

6.

Quantitative evaluation of bias in PCR amplification and next-generation sequencing derived from metabarcoding samples.

Pawluczyk M, Weiss J, Links MG, Egaña Aranguren M, Wilkinson MD, Egea-Cortines M.

Anal Bioanal Chem. 2015 Mar;407(7):1841-8. doi: 10.1007/s00216-014-8435-y. Epub 2015 Jan 11.

PMID:
25577362
7.

Rapid identification of the Leptosphaeria maculans avirulence gene AvrLm2 using an intraspecific comparative genomics approach.

Ghanbarnia K, Fudal I, Larkan NJ, Links MG, Balesdent MH, Profotova B, Fernando WG, Rouxel T, Borhan MH.

Mol Plant Pathol. 2015 Sep;16(7):699-709. doi: 10.1111/mpp.12228. Epub 2015 Jan 29.

PMID:
25492575
8.

Transposable element-assisted evolution and adaptation to host plant within the Leptosphaeria maculans-Leptosphaeria biglobosa species complex of fungal pathogens.

Grandaubert J, Lowe RG, Soyer JL, Schoch CL, Van de Wouw AP, Fudal I, Robbertse B, Lapalu N, Links MG, Ollivier B, Linglin J, Barbe V, Mangenot S, Cruaud C, Borhan H, Howlett BJ, Balesdent MH, Rouxel T.

BMC Genomics. 2014 Oct 12;15:891. doi: 10.1186/1471-2164-15-891.

9.
10.

Characterization of the vaginal microbiota of healthy Canadian women through the menstrual cycle.

Chaban B, Links MG, Jayaprakash TP, Wagner EC, Bourque DK, Lohn Z, Albert AY, van Schalkwyk J, Reid G, Hemmingsen SM, Hill JE, Money DM.

Microbiome. 2014 Jul 4;2:23. doi: 10.1186/2049-2618-2-23. eCollection 2014.

11.

Polyploid evolution of the Brassicaceae during the Cenozoic era.

Kagale S, Robinson SJ, Nixon J, Xiao R, Huebert T, Condie J, Kessler D, Clarke WE, Edger PP, Links MG, Sharpe AG, Parkin IA.

Plant Cell. 2014 Jul;26(7):2777-91. doi: 10.1105/tpc.114.126391. Epub 2014 Jul 17.

12.

Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea.

Parkin IA, Koh C, Tang H, Robinson SJ, Kagale S, Clarke WE, Town CD, Nixon J, Krishnakumar V, Bidwell SL, Denoeud F, Belcram H, Links MG, Just J, Clarke C, Bender T, Huebert T, Mason AS, Pires JC, Barker G, Moore J, Walley PG, Manoli S, Batley J, Edwards D, Nelson MN, Wang X, Paterson AH, King G, Bancroft I, Chalhoub B, Sharpe AG.

Genome Biol. 2014 Jun 10;15(6):R77. doi: 10.1186/gb-2014-15-6-r77.

13.

The emerging biofuel crop Camelina sativa retains a highly undifferentiated hexaploid genome structure.

Kagale S, Koh C, Nixon J, Bollina V, Clarke WE, Tuteja R, Spillane C, Robinson SJ, Links MG, Clarke C, Higgins EE, Huebert T, Sharpe AG, Parkin IA.

Nat Commun. 2014 Apr 23;5:3706. doi: 10.1038/ncomms4706.

14.

mPUMA: a computational approach to microbiota analysis by de novo assembly of operational taxonomic units based on protein-coding barcode sequences.

Links MG, Chaban B, Hemmingsen SM, Muirhead K, Hill JE.

Microbiome. 2013 Aug 15;1(1):23. doi: 10.1186/2049-2618-1-23.

15.

Simultaneous profiling of seed-associated bacteria and fungi reveals antagonistic interactions between microorganisms within a shared epiphytic microbiome on Triticum and Brassica seeds.

Links MG, Demeke T, Gräfenhan T, Hill JE, Hemmingsen SM, Dumonceaux TJ.

New Phytol. 2014 Apr;202(2):542-53. doi: 10.1111/nph.12693. Epub 2014 Jan 21.

16.

Molecular characterization of anaerobic digester microbial communities identifies microorganisms that correlate to reactor performance.

Town JR, Links MG, Fonstad TA, Dumonceaux TJ.

Bioresour Technol. 2014 Jan;151:249-57. doi: 10.1016/j.biortech.2013.10.070. Epub 2013 Oct 30.

PMID:
24246480
17.

Characterization of the upper respiratory tract microbiomes of patients with pandemic H1N1 influenza.

Chaban B, Albert A, Links MG, Gardy J, Tang P, Hill JE.

PLoS One. 2013 Jul 2;8(7):e69559. doi: 10.1371/journal.pone.0069559. Print 2013.

18.

The chaperonin-60 universal target is a barcode for bacteria that enables de novo assembly of metagenomic sequence data.

Links MG, Dumonceaux TJ, Hemmingsen SM, Hill JE.

PLoS One. 2012;7(11):e49755. doi: 10.1371/journal.pone.0049755. Epub 2012 Nov 26.

19.

De novo sequence assembly of Albugo candida reveals a small genome relative to other biotrophic oomycetes.

Links MG, Holub E, Jiang RH, Sharpe AG, Hegedus D, Beynon E, Sillito D, Clarke WE, Uzuhashi S, Borhan MH.

BMC Genomics. 2011 Oct 13;12:503. doi: 10.1186/1471-2164-12-503.

20.

A molecular enrichment strategy based on cpn60 for detection of epsilon-proteobacteria in the dog fecal microbiome.

Chaban B, Links MG, Hill JE.

Microb Ecol. 2012 Feb;63(2):348-57. doi: 10.1007/s00248-011-9931-7. Epub 2011 Sep 1.

PMID:
21881944
21.

The genome of the mesopolyploid crop species Brassica rapa.

Wang X, Wang H, Wang J, Sun R, Wu J, Liu S, Bai Y, Mun JH, Bancroft I, Cheng F, Huang S, Li X, Hua W, Wang J, Wang X, Freeling M, Pires JC, Paterson AH, Chalhoub B, Wang B, Hayward A, Sharpe AG, Park BS, Weisshaar B, Liu B, Li B, Liu B, Tong C, Song C, Duran C, Peng C, Geng C, Koh C, Lin C, Edwards D, Mu D, Shen D, Soumpourou E, Li F, Fraser F, Conant G, Lassalle G, King GJ, Bonnema G, Tang H, Wang H, Belcram H, Zhou H, Hirakawa H, Abe H, Guo H, Wang H, Jin H, Parkin IA, Batley J, Kim JS, Just J, Li J, Xu J, Deng J, Kim JA, Li J, Yu J, Meng J, Wang J, Min J, Poulain J, Wang J, Hatakeyama K, Wu K, Wang L, Fang L, Trick M, Links MG, Zhao M, Jin M, Ramchiary N, Drou N, Berkman PJ, Cai Q, Huang Q, Li R, Tabata S, Cheng S, Zhang S, Zhang S, Huang S, Sato S, Sun S, Kwon SJ, Choi SR, Lee TH, Fan W, Zhao X, Tan X, Xu X, Wang Y, Qiu Y, Yin Y, Li Y, Du Y, Liao Y, Lim Y, Narusaka Y, Wang Y, Wang Z, Li Z, Wang Z, Xiong Z, Zhang Z; Brassica rapa Genome Sequencing Project Consortium.

Nat Genet. 2011 Aug 28;43(10):1035-9. doi: 10.1038/ng.919.

PMID:
21873998
22.

Molecular definition of vaginal microbiota in East African commercial sex workers.

Schellenberg JJ, Links MG, Hill JE, Dumonceaux TJ, Kimani J, Jaoko W, Wachihi C, Mungai JN, Peters GA, Tyler S, Graham M, Severini A, Fowke KR, Ball TB, Plummer FA.

Appl Environ Microbiol. 2011 Jun;77(12):4066-74. doi: 10.1128/AEM.02943-10. Epub 2011 Apr 29.

23.

Pyrosequencing of chaperonin-60 (cpn60) amplicons as a means of determining microbial community composition.

Schellenberg J, Links MG, Hill JE, Hemmingsen SM, Peters GA, Dumonceaux TJ.

Methods Mol Biol. 2011;733:143-58. doi: 10.1007/978-1-61779-089-8_10.

PMID:
21431768
24.

Predicting relatedness of bacterial genomes using the chaperonin-60 universal target (cpn60 UT): application to Thermoanaerobacter species.

Verbeke TJ, Sparling R, Hill JE, Links MG, Levin D, Dumonceaux TJ.

Syst Appl Microbiol. 2011 May;34(3):171-9. doi: 10.1016/j.syapm.2010.11.019. Epub 2011 Mar 9.

PMID:
21392917
25.

Towards unambiguous transcript mapping in the allotetraploid Brassica napus.

Parkin IA, Clarke WE, Sidebottom C, Zhang W, Robinson SJ, Links MG, Karcz S, Higgins EE, Fobert P, Sharpe AG.

Genome. 2010 Nov;53(11):929-38. doi: 10.1139/G10-053.

PMID:
21076508
26.

Genome-wide analysis of ethylene-responsive element binding factor-associated amphiphilic repression motif-containing transcriptional regulators in Arabidopsis.

Kagale S, Links MG, Rozwadowski K.

Plant Physiol. 2010 Mar;152(3):1109-34. doi: 10.1104/pp.109.151704. Epub 2010 Jan 22.

27.

An archived activation tagged population of Arabidopsis thaliana to facilitate forward genetics approaches.

Robinson SJ, Tang LH, Mooney BA, McKay SJ, Clarke WE, Links MG, Karcz S, Regan S, Wu YY, Gruber MY, Cui D, Yu M, Parkin IA.

BMC Plant Biol. 2009 Jul 31;9:101. doi: 10.1186/1471-2229-9-101.

28.

Pyrosequencing of the chaperonin-60 universal target as a tool for determining microbial community composition.

Schellenberg J, Links MG, Hill JE, Dumonceaux TJ, Peters GA, Tyler S, Ball TB, Severini A, Plummer FA.

Appl Environ Microbiol. 2009 May;75(9):2889-98. doi: 10.1128/AEM.01640-08. Epub 2009 Mar 6.

29.

Development of an Adonis aestivalis expressed sequence tag population as a resource for genes of the carotenoid pathway.

Li R, Links MG, Gjetvaj B, Sharpe A, Hannoufa A.

Genome. 2008 Nov;51(11):888-96. doi: 10.1139/G08-073.

PMID:
18956021
30.

Reaping the Benefits of SAGE.

Robinson SJ, Guenther JD, Lewis CT, Links MG, Parkin IA.

Methods Mol Biol. 2007;406:365-86.

PMID:
18287703
31.

Wheat EST resources for functional genomics of abiotic stress.

Houde M, Belcaid M, Ouellet F, Danyluk J, Monroy AF, Dryanova A, Gulick P, Bergeron A, Laroche A, Links MG, MacCarthy L, Crosby WL, Sarhan F.

BMC Genomics. 2006 Jun 13;7:149.

Supplemental Content

Loading ...
Support Center