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Items: 1 to 50 of 186

1.

Immunogenicity of trimeric autotransporter adhesins and their potential as vaccine targets.

Thibau A, Dichter AA, Vaca DJ, Linke D, Goldman A, Kempf VAJ.

Med Microbiol Immunol. 2019 Dec 1. doi: 10.1007/s00430-019-00649-y. [Epub ahead of print] Review.

PMID:
31788746
2.

Native display of a huge homotrimeric protein fiber on the cell surface after precise domain deletion.

Aoki S, Yoshimoto S, Ishikawa M, Linke D, Lupas A, Hori K.

J Biosci Bioeng. 2019 Oct 22. pii: S1389-1723(19)30830-8. doi: 10.1016/j.jbiosc.2019.09.022. [Epub ahead of print]

PMID:
31653547
3.

Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases.

Tørresen OK, Star B, Mier P, Andrade-Navarro MA, Bateman A, Jarnot P, Gruca A, Grynberg M, Kajava AV, Promponas VJ, Anisimova M, Jakobsen KS, Linke D.

Nucleic Acids Res. 2019 Dec 2;47(21):10994-11006. doi: 10.1093/nar/gkz841.

4.

Overcoming Fish Defences: The Virulence Factors of Yersinia ruckeri.

Wrobel A, Leo JC, Linke D.

Genes (Basel). 2019 Sep 11;10(9). pii: E700. doi: 10.3390/genes10090700. Review.

5.

The BtaF Adhesin Is Necessary for Full Virulence During Respiratory Infection by Brucella suis and Is a Novel Immunogen for Nasal Vaccination Against Brucella Infection.

Muñoz González F, Sycz G, Alonso Paiva IM, Linke D, Zorreguieta A, Baldi PC, Ferrero MC.

Front Immunol. 2019 Jul 26;10:1775. doi: 10.3389/fimmu.2019.01775. eCollection 2019.

6.

Colicin Z, a structurally and functionally novel colicin type that selectively kills enteroinvasive Escherichia coli and Shigella strains.

Micenková L, Bosák J, Kucera J, Hrala M, Dolejšová T, Šedo O, Linke D, Fišer R, Šmajs D.

Sci Rep. 2019 Jul 31;9(1):11127. doi: 10.1038/s41598-019-47488-8.

7.

A unified model for BAM function that takes into account type Vc secretion and species differences in BAM composition.

Leo JC, Linke D.

AIMS Microbiol. 2018 Jun 22;4(3):455-468. doi: 10.3934/microbiol.2018.3.455. eCollection 2018.

8.

Type V Secretion Systems: An Overview of Passenger Domain Functions.

Meuskens I, Saragliadis A, Leo JC, Linke D.

Front Microbiol. 2019 May 31;10:1163. doi: 10.3389/fmicb.2019.01163. eCollection 2019. Review.

9.

Catching a SPY: Using the SpyCatcher-SpyTag and Related Systems for Labeling and Localizing Bacterial Proteins.

Hatlem D, Trunk T, Linke D, Leo JC.

Int J Mol Sci. 2019 Apr 30;20(9). pii: E2129. doi: 10.3390/ijms20092129. Review.

10.

Can Positioning Systems Replace Timing Gates for Measuring Sprint Time in Ice Hockey?

Link D, Weber M, Linke D, Lames M.

Front Physiol. 2019 Jan 18;9:1882. doi: 10.3389/fphys.2018.01882. eCollection 2018.

11.

Insights into the autotransport process of a trimeric autotransporter, Yersinia Adhesin A (YadA).

Chauhan N, Hatlem D, Orwick-Rydmark M, Schneider K, Floetenmeyer M, van Rossum B, Leo JC, Linke D.

Mol Microbiol. 2019 Mar;111(3):844-862. doi: 10.1111/mmi.14195. Epub 2019 Feb 13.

PMID:
30600549
12.

Impact of sensor/reference position on player tracking variables: Center of scapulae vs center of pelvis.

Linke D, Lames M.

J Biomech. 2019 Jan 23;83:319-323. doi: 10.1016/j.jbiomech.2018.11.046. Epub 2018 Dec 5.

PMID:
30551921
13.

Decline in Match Running Performance in Football is affected by an Increase in Game Interruptions.

Linke D, Link D, Weber H, Lames M.

J Sports Sci Med. 2018 Nov 20;17(4):662-667. eCollection 2018 Dec.

14.

pYR4 From a Norwegian Isolate of Yersinia ruckeri Is a Putative Virulence Plasmid Encoding Both a Type IV Pilus and a Type IV Secretion System.

Wrobel A, Ottoni C, Leo JC, Linke D.

Front Cell Infect Microbiol. 2018 Oct 30;8:373. doi: 10.3389/fcimb.2018.00373. eCollection 2018.

15.

Control of coordinatively unsaturated Zr sites in ZrO2 for efficient C-H bond activation.

Zhang Y, Zhao Y, Otroshchenko T, Lund H, Pohl MM, Rodemerck U, Linke D, Jiao H, Jiang G, Kondratenko EV.

Nat Commun. 2018 Sep 18;9(1):3794. doi: 10.1038/s41467-018-06174-5.

16.

Long-Term Monokaryotic Cultures of Pleurotus ostreatus var. florida Produce High and Stable Laccase Activity Capable to Degrade ß-Carotene.

Linke D, Omarini AB, Takenberg M, Kelle S, Berger RG.

Appl Biochem Biotechnol. 2019 Mar;187(3):894-912. doi: 10.1007/s12010-018-2860-x. Epub 2018 Aug 11.

PMID:
30099681
17.

Validation of electronic performance and tracking systems EPTS under field conditions.

Linke D, Link D, Lames M.

PLoS One. 2018 Jul 23;13(7):e0199519. doi: 10.1371/journal.pone.0199519. eCollection 2018.

18.

BadGluc, a β-glucosidase from Bjerkandera adusta with anthocyanase properties.

Behrens CJ, Krahe NK, Linke D, Berger RG.

Bioprocess Biosyst Eng. 2018 Sep;41(9):1391-1401. doi: 10.1007/s00449-018-1966-4. Epub 2018 Jun 12.

PMID:
29948211
19.

Cell-free one-pot conversion of (+)-valencene to (+)-nootkatone by a unique dye-decolorizing peroxidase combined with a laccase from Funalia trogii.

Kolwek J, Behrens C, Linke D, Krings U, Berger RG.

J Ind Microbiol Biotechnol. 2018 Feb;45(2):89-101. doi: 10.1007/s10295-017-1998-9. Epub 2017 Dec 22.

PMID:
29270883
20.

A New Strain Collection for Improved Expression of Outer Membrane Proteins.

Meuskens I, Michalik M, Chauhan N, Linke D, Leo JC.

Front Cell Infect Microbiol. 2017 Nov 7;7:464. doi: 10.3389/fcimb.2017.00464. eCollection 2017.

21.

Estimation and validation of spatio-temporal parameters for sprint running using a radio-based tracking system.

Seidl T, Linke D, Lames M.

J Biomech. 2017 Dec 8;65:89-95. doi: 10.1016/j.jbiomech.2017.10.003. Epub 2017 Oct 12.

PMID:
29106897
22.

The repeat structure of two paralogous genes, Yersinia ruckeri invasin (yrInv) and a "Y. ruckeri invasin-like molecule", (yrIlm) sheds light on the evolution of adhesive capacities of a fish pathogen.

Wrobel A, Ottoni C, Leo JC, Gulla S, Linke D.

J Struct Biol. 2018 Feb;201(2):171-183. doi: 10.1016/j.jsb.2017.08.008. Epub 2017 Sep 6.

PMID:
28888816
23.

Cold generation of smoke flavour by the first phenolic acid decarboxylase from a filamentous ascomycete - Isaria farinosa.

Linke D, Riemer SJL, Schimanski S, Nieter A, Krings U, Berger RG.

Fungal Biol. 2017 Sep;121(9):763-774. doi: 10.1016/j.funbio.2017.05.006. Epub 2017 Jun 3.

PMID:
28800848
24.

An evolutionarily conserved glycine-tyrosine motif forms a folding core in outer membrane proteins.

Michalik M, Orwick-Rydmark M, Habeck M, Alva V, Arnold T, Linke D.

PLoS One. 2017 Aug 3;12(8):e0182016. doi: 10.1371/journal.pone.0182016. eCollection 2017.

25.

Variants of PpuLcc, a multi-dye decolorizing laccase from Pleurotus pulmonarius expressed in Pichia pastoris.

Behrens CJ, Linke D, Allister AB, Zelena K, Berger RG.

Protein Expr Purif. 2017 Sep;137:34-42. doi: 10.1016/j.pep.2017.06.014. Epub 2017 Jun 23.

PMID:
28651974
26.

A p-coumaroyl esterase from Rhizoctonia solani with a pronounced chlorogenic acid esterase activity.

Nieter A, Kelle S, Linke D, Berger RG.

N Biotechnol. 2017 Jul 25;37(Pt B):153-161. doi: 10.1016/j.nbt.2017.01.002. Epub 2017 Jan 31.

PMID:
28159727
27.

Vitronectin Binds to a Specific Stretch within the Head Region of Yersinia Adhesin A and Thereby Modulates Yersinia enterocolitica Host Interaction.

Mühlenkamp MC, Hallström T, Autenrieth IB, Bohn E, Linke D, Rinker J, Riesbeck K, Singh B, Leo JC, Hammerschmidt S, Zipfel PF, Schütz MS.

J Innate Immun. 2017;9(1):33-51. doi: 10.1159/000449200. Epub 2016 Nov 1.

28.

Unexpectedly high activity of bare alumina for non-oxidative isobutane dehydrogenation.

Rodemerck U, Kondratenko EV, Otroshchenko T, Linke D.

Chem Commun (Camb). 2016 Oct 6;52(82):12222-12225.

PMID:
27711441
29.

Feruloyl esterases from Schizophyllum commune to treat food industry side-streams.

Nieter A, Kelle S, Linke D, Berger RG.

Bioresour Technol. 2016 Nov;220:38-46. doi: 10.1016/j.biortech.2016.08.045. Epub 2016 Aug 12.

PMID:
27566510
30.
31.

Salt Taste Enhancing l-Arginyl Dipeptides from Casein and Lysozyme Released by Peptidases of Basidiomycota.

Harth L, Krah U, Linke D, Dunkel A, Hofmann T, Berger RG.

J Agric Food Chem. 2018 Mar 14;66(10):2344-2353. doi: 10.1021/acs.jafc.6b02716. Epub 2016 Aug 24.

PMID:
27509299
32.

Comparative Proteome Analysis in Schizosaccharomyces pombe Identifies Metabolic Targets to Improve Protein Production and Secretion.

Hung CW, Klein T, Cassidy L, Linke D, Lange S, Anders U, Bureik M, Heinzle E, Schneider K, Tholey A.

Mol Cell Proteomics. 2016 Oct;15(10):3090-3106. Epub 2016 Jul 31.

33.

Secretion of the Intimin Passenger Domain Is Driven by Protein Folding.

Leo JC, Oberhettinger P, Yoshimoto S, Udatha DB, Morth JP, Schütz M, Hori K, Linke D.

J Biol Chem. 2016 Sep 16;291(38):20096-112. doi: 10.1074/jbc.M116.731497. Epub 2016 Jul 27.

34.

Bulk binary ZrO2-based oxides as highly active alternative-type catalysts for non-oxidative isobutane dehydrogenation.

Otroshchenko T, Radnik J, Schneider M, Rodemerck U, Linke D, Kondratenko EV.

Chem Commun (Camb). 2016 Jun 21;52(52):8164-7. doi: 10.1039/c6cc02813f.

PMID:
27277540
35.

Heterologous production and characterization of a chlorogenic acid esterase from Ustilago maydis with a potential use in baking.

Nieter A, Kelle S, Takenberg M, Linke D, Bunzel M, Popper L, Berger RG.

Food Chem. 2016 Oct 15;209:1-9. doi: 10.1016/j.foodchem.2016.03.106. Epub 2016 Apr 6.

PMID:
27173527
36.

Epitope-Tagged Autotransporters as Single-Cell Reporters for Gene Expression by a Salmonella Typhimurium wbaP Mutant.

Curkić I, Schütz M, Oberhettinger P, Diard M, Claassen M, Linke D, Hardt WD.

PLoS One. 2016 May 5;11(5):e0154828. doi: 10.1371/journal.pone.0154828. eCollection 2016.

37.

Reverse Vaccinology: The Pathway from Genomes and Epitope Predictions to Tailored Recombinant Vaccines.

Michalik M, Djahanshiri B, Leo JC, Linke D.

Methods Mol Biol. 2016;1403:87-106. doi: 10.1007/978-1-4939-3387-7_4.

PMID:
27076126
38.

The Use of Detergents to Purify Membrane Proteins.

Orwick-Rydmark M, Arnold T, Linke D.

Curr Protoc Protein Sci. 2016 Apr 1;84:4.8.1-4.8.35. doi: 10.1002/0471140864.ps0408s84.

PMID:
27038269
39.

Type V Secretion Systems in Bacteria.

Fan E, Chauhan N, Udatha DB, Leo JC, Linke D.

Microbiol Spectr. 2016 Feb;4(1). doi: 10.1128/microbiolspec.VMBF-0009-2015. Review.

PMID:
26999388
40.

C-Terminal Charge-Reversal Derivatization and Parallel Use of Multiple Proteases Facilitates Identification of Protein C-Termini by C-Terminomics.

Somasundaram P, Koudelka T, Linke D, Tholey A.

J Proteome Res. 2016 Apr 1;15(4):1369-78. doi: 10.1021/acs.jproteome.6b00146. Epub 2016 Mar 17.

PMID:
26939532
41.

Heterologous production of the stain solving peptidase PPP1 from Pleurotus pulmonarius.

Leonhardt RH, Krings U, Berger RG, Linke D.

Bioprocess Biosyst Eng. 2016 May;39(5):845-53. doi: 10.1007/s00449-016-1564-2. Epub 2016 Feb 12.

PMID:
26873705
42.

Analysis of Endothelial Adherence of Bartonella henselae and Acinetobacter baumannii Using a Dynamic Human Ex Vivo Infection Model.

Weidensdorfer M, Chae JI, Makobe C, Stahl J, Averhoff B, Müller V, Schürmann C, Brandes RP, Wilharm G, Ballhorn W, Christ S, Linke D, Fischer D, Göttig S, Kempf VA.

Infect Immun. 2015 Dec 28;84(3):711-22. doi: 10.1128/IAI.01502-15.

43.

Structural Basis for Toughness and Flexibility in the C-terminal Passenger Domain of an Acinetobacter Trimeric Autotransporter Adhesin.

Koiwai K, Hartmann MD, Linke D, Lupas AN, Hori K.

J Biol Chem. 2016 Feb 19;291(8):3705-24. doi: 10.1074/jbc.M115.701698. Epub 2015 Dec 23.

44.

ZrO2 -Based Alternatives to Conventional Propane Dehydrogenation Catalysts: Active Sites, Design, and Performance.

Otroshchenko T, Sokolov S, Stoyanova M, Kondratenko VA, Rodemerck U, Linke D, Kondratenko EV.

Angew Chem Int Ed Engl. 2015 Dec 21;54(52):15880-3. doi: 10.1002/anie.201508731. Epub 2015 Nov 13.

PMID:
26566072
45.

Conserved phosphorylation sites in the activation loop of the Arabidopsis phytosulfokine receptor PSKR1 differentially affect kinase and receptor activity.

Hartmann J, Linke D, Bönniger C, Tholey A, Sauter M.

Biochem J. 2015 Dec 15;472(3):379-91. doi: 10.1042/BJ20150147. Epub 2015 Oct 15.

46.

Strategies for the Analysis of Bam Recognition Motifs in Outer Membrane Proteins.

Paramasivam N, Linke D.

Methods Mol Biol. 2015;1329:271-7. doi: 10.1007/978-1-4939-2871-2_21.

PMID:
26427692
47.

Assessing the Outer Membrane Insertion and Folding of Multimeric Transmembrane β-Barrel Proteins.

Leo JC, Oberhettinger P, Linke D.

Methods Mol Biol. 2015;1329:157-67. doi: 10.1007/978-1-4939-2871-2_12.

PMID:
26427683
48.

Identification and relative quantification of phosphopeptides by a combination of multi-protease digestion and isobaric labeling.

Linke D, Koudelka T, Becker A, Tholey A.

Rapid Commun Mass Spectrom. 2015 May 30;29(10):919-26. doi: 10.1002/rcm.7185.

PMID:
26407306
49.

Solid-state NMR Study of the YadA Membrane-Anchor Domain in the Bacterial Outer Membrane.

Shahid SA, Nagaraj M, Chauhan N, Franks TW, Bardiaux B, Habeck M, Orwick-Rydmark M, Linke D, van Rossum BJ.

Angew Chem Int Ed Engl. 2015 Oct 19;54(43):12602-6. doi: 10.1002/anie.201505506. Epub 2015 Aug 31.

PMID:
26332158
50.

Correction to the paper: "Purification of the YadA membrane anchor for secondary structure analysis and crystallization".

Chauhan N, Linke D.

Int J Biol Macromol. 2015 Nov;81:599. doi: 10.1016/j.ijbiomac.2015.08.052. Epub 2015 Aug 28. No abstract available.

PMID:
26318219

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