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Will rising atmospheric CO2 concentration inhibit nitrate assimilation in shoots but enhance it in roots of C3 plants?

Andrews M, Condron LM, Kemp PD, Topping JF, Lindsey K, Hodge S, Raven JA.

Physiol Plant. 2020 Mar 20. doi: 10.1111/ppl.13096. [Epub ahead of print]


Cryptic and atypical KMT2A-USP2 and KMT2A-USP8 rearrangements identified by mate pair sequencing in infant and childhood leukemia.

Blackburn PR, Smadbeck JB, Znoyko I, Webley MR, Pitel BA, Vasmatzis G, Xu X, Greipp PT, Hoppman NL, Ketterling RP, Baughn LB, Lindsey KG, Schandl CA, Wolff DJ, Peterson JF.

Genes Chromosomes Cancer. 2020 Mar 20. doi: 10.1002/gcc.22842. [Epub ahead of print]


CRISPR/Cas Systems in Genome Editing: Methodologies and Tools for sgRNA Design, Off-Target Evaluation, and Strategies to Mitigate Off-Target Effects.

Manghwar H, Li B, Ding X, Hussain A, Lindsey K, Zhang X, Jin S.

Adv Sci (Weinh). 2020 Feb 6;7(6):1902312. doi: 10.1002/advs.201902312. eCollection 2020 Mar. Review.


Erythrophagocytosis by leukemic blasts in acute myeloid leukemia with a normal karyotype and no detectable mutations.

Collins NG, O'Connor HM, Lindsey KG.

Proc (Bayl Univ Med Cent). 2019 Oct 25;33(1):65-66. doi: 10.1080/08998280.2019.1674051. eCollection 2020 Jan.


Combined GWAS and eQTL analysis uncovers a genetic regulatory network orchestrating the initiation of secondary cell wall development in cotton.

Li Z, Wang P, You C, Yu J, Zhang X, Yan F, Ye Z, Shen C, Li B, Guo K, Liu N, Thyssen GN, Fang DD, Lindsey K, Zhang X, Wang M, Tu L.

New Phytol. 2020 Feb 3. doi: 10.1111/nph.16468. [Epub ahead of print]


Silver nanoparticles regulate Arabidopsis root growth by concentration-dependent modification of reactive oxygen species accumulation and cell division.

Wang L, Sun J, Lin L, Fu Y, Alenius H, Lindsey K, Chen C.

Ecotoxicol Environ Saf. 2020 Mar 1;190:110072. doi: 10.1016/j.ecoenv.2019.110072. Epub 2019 Dec 26.


CRISPR/Cas System: Recent Advances and Future Prospects for Genome Editing.

Manghwar H, Lindsey K, Zhang X, Jin S.

Trends Plant Sci. 2019 Dec;24(12):1102-1125. doi: 10.1016/j.tplants.2019.09.006. Epub 2019 Nov 11. Review.


The chromosome-scale reference genome of black pepper provides insight into piperine biosynthesis.

Hu L, Xu Z, Wang M, Fan R, Yuan D, Wu B, Wu H, Qin X, Yan L, Tan L, Sim S, Li W, Saski CA, Daniell H, Wendel JF, Lindsey K, Zhang X, Hao C, Jin S.

Nat Commun. 2019 Oct 16;10(1):4702. doi: 10.1038/s41467-019-12607-6.


High-efficient and precise base editing of C•G to T•A in the allotetraploid cotton (Gossypium hirsutum) genome using a modified CRISPR/Cas9 system.

Qin L, Li J, Wang Q, Xu Z, Sun L, Alariqi M, Manghwar H, Wang G, Li B, Ding X, Rui H, Huang H, Lu T, Lindsey K, Daniell H, Zhang X, Jin S.

Plant Biotechnol J. 2020 Jan;18(1):45-56. doi: 10.1111/pbi.13168. Epub 2019 Jun 7.


GhCyP3 improves the resistance of cotton to Verticillium dahliae by inhibiting the E3 ubiquitin ligase activity of GhPUB17.

Qin T, Liu S, Zhang Z, Sun L, He X, Lindsey K, Zhu L, Zhang X.

Plant Mol Biol. 2019 Mar;99(4-5):379-393. doi: 10.1007/s11103-019-00824-y. Epub 2019 Jan 22.


Health insurance literacy and health service utilization among college students.

James TG, Sullivan MK, Dumeny L, Lindsey K, Cheong J, Nicolette G.

J Am Coll Health. 2020 Feb-Mar;68(2):200-206. doi: 10.1080/07448481.2018.1538151. Epub 2018 Dec 10.


Reference genome sequences of two cultivated allotetraploid cottons, Gossypium hirsutum and Gossypium barbadense.

Wang M, Tu L, Yuan D, Zhu, Shen C, Li J, Liu F, Pei L, Wang P, Zhao G, Ye Z, Huang H, Yan F, Ma Y, Zhang L, Liu M, You J, Yang Y, Liu Z, Huang F, Li B, Qiu P, Zhang Q, Zhu L, Jin S, Yang X, Min L, Li G, Chen LL, Zheng H, Lindsey K, Lin Z, Udall JA, Zhang X.

Nat Genet. 2019 Feb;51(2):224-229. doi: 10.1038/s41588-018-0282-x. Epub 2018 Dec 3.


Elevated CO2 effects on nitrogen assimilation and growth of C3 vascular plants are similar regardless of N-form assimilated.

Andrews M, Condron LM, Kemp PD, Topping JF, Lindsey K, Hodge S, Raven JA.

J Exp Bot. 2019 Jan 7;70(2):683-690. doi: 10.1093/jxb/ery371.


Whole genome sequencing reveals rare off-target mutations and considerable inherent genetic or/and somaclonal variations in CRISPR/Cas9-edited cotton plants.

Li J, Manghwar H, Sun L, Wang P, Wang G, Sheng H, Zhang J, Liu H, Qin L, Rui H, Li B, Lindsey K, Daniell H, Jin S, Zhang X.

Plant Biotechnol J. 2019 May;17(5):858-868. doi: 10.1111/pbi.13020. Epub 2018 Oct 30.


Multi-omics analyses reveal epigenomics basis for cotton somatic embryogenesis through successive regeneration acclimation process.

Li J, Wang M, Li Y, Zhang Q, Lindsey K, Daniell H, Jin S, Zhang X.

Plant Biotechnol J. 2019 Feb;17(2):435-450. doi: 10.1111/pbi.12988. Epub 2018 Sep 30.


Automated Real-Time Collection of Pathogen-Specific Diagnostic Data: Syndromic Infectious Disease Epidemiology.

Meyers L, Ginocchio CC, Faucett AN, Nolte FS, Gesteland PH, Leber A, Janowiak D, Donovan V, Dien Bard J, Spitzer S, Stellrecht KA, Salimnia H, Selvarangan R, Juretschko S, Daly JA, Wallentine JC, Lindsey K, Moore F, Reed SL, Aguero-Rosenfeld M, Fey PD, Storch GA, Melnick SJ, Robinson CC, Meredith JF, Cook CV, Nelson RK, Jones JD, Scarpino SV, Althouse BM, Ririe KM, Malin BA, Poritz MA.

JMIR Public Health Surveill. 2018 Jul 6;4(3):e59. doi: 10.2196/publichealth.9876.


Polyoma virus-associated carcinomas of the urologic tract: a clinicopathologic and molecular study.

Sirohi D, Vaske C, Sanborn Z, Smith SC, Don MD, Lindsey KG, Federman S, Vankalakunti M, Koo J, Bose S, Peralta-Venturina M, Ziffle JV, Grenert JP, Miller S, Chiu C, Amin MB, Simko JP, Stohr BA, Luthringer DJ.

Mod Pathol. 2018 Sep;31(9):1429-1441. doi: 10.1038/s41379-018-0065-z. Epub 2018 May 15.


Epidermal expression of a sterol biosynthesis gene regulates root growth by a non-cell-autonomous mechanism in Arabidopsis.

Short E, Leighton M, Imriz G, Liu D, Cope-Selby N, Hetherington F, Smertenko A, Hussey PJ, Topping JF, Lindsey K.

Development. 2018 May 15;145(10). pii: dev160572. doi: 10.1242/dev.160572.


ALT-803, an IL-15 superagonist, in combination with nivolumab in patients with metastatic non-small cell lung cancer: a non-randomised, open-label, phase 1b trial.

Wrangle JM, Velcheti V, Patel MR, Garrett-Mayer E, Hill EG, Ravenel JG, Miller JS, Farhad M, Anderton K, Lindsey K, Taffaro-Neskey M, Sherman C, Suriano S, Swiderska-Syn M, Sion A, Harris J, Edwards AR, Rytlewski JA, Sanders CM, Yusko EC, Robinson MD, Krieg C, Redmond WL, Egan JO, Rhode PR, Jeng EK, Rock AD, Wong HC, Rubinstein MP.

Lancet Oncol. 2018 May;19(5):694-704. doi: 10.1016/S1470-2045(18)30148-7. Epub 2018 Apr 5.


Bayesian uncertainty analysis for complex systems biology models: emulation, global parameter searches and evaluation of gene functions.

Vernon I, Liu J, Goldstein M, Rowe J, Topping J, Lindsey K.

BMC Syst Biol. 2018 Jan 2;12(1):1. doi: 10.1186/s12918-017-0484-3.


Three-year review of gene sequencing analyses of pulmonary non-small cell lung cancers obtained by fine-needle aspiration or surgical biopsy: mutation and failure rates.

Snider JS, Hirschhorn JW, Yang J, Chajewski OS, Houston PM, Lindsey KG.

J Am Soc Cytopathol. 2018 Nov - Dec;7(6):300-305. doi: 10.1016/j.jasc.2018.04.007. Epub 2018 Jun 8.


The GhmiR157a-GhSPL10 regulatory module controls initial cellular dedifferentiation and callus proliferation in cotton by modulating ethylene-mediated flavonoid biosynthesis.

Wang L, Liu N, Wang T, Li J, Wen T, Yang X, Lindsey K, Zhang X.

J Exp Bot. 2018 Feb 23;69(5):1081-1093. doi: 10.1093/jxb/erx475.


For the Love of Nature: Exploring the Importance of Species Diversity and Micro-Variables Associated with Favorite Outdoor Places.

Schebella MF, Weber D, Lindsey K, Daniels CB.

Front Psychol. 2017 Dec 1;8:2094. doi: 10.3389/fpsyg.2017.02094. eCollection 2017.


Laccase GhLac1 Modulates Broad-Spectrum Biotic Stress Tolerance via Manipulating Phenylpropanoid Pathway and Jasmonic Acid Synthesis.

Hu Q, Min L, Yang X, Jin S, Zhang L, Li Y, Ma Y, Qi X, Li D, Liu H, Lindsey K, Zhu L, Zhang X.

Plant Physiol. 2018 Feb;176(2):1808-1823. doi: 10.1104/pp.17.01628. Epub 2017 Dec 11.


Crosstalk Complexities between Auxin, Cytokinin, and Ethylene in Arabidopsis Root Development: From Experiments to Systems Modeling, and Back Again.

Liu J, Moore S, Chen C, Lindsey K.

Mol Plant. 2017 Dec 4;10(12):1480-1496. doi: 10.1016/j.molp.2017.11.002. Epub 2017 Nov 21. Review.


Long noncoding RNAs involve in resistance to Verticillium dahliae, a fungal disease in cotton.

Zhang L, Wang M, Li N, Wang H, Qiu P, Pei L, Xu Z, Wang T, Gao E, Liu J, Liu S, Hu Q, Miao Y, Lindsey K, Tu L, Zhu L, Zhang X.

Plant Biotechnol J. 2018 Jun;16(6):1172-1185. doi: 10.1111/pbi.12861. Epub 2017 Dec 21.


Medicinal Mascarene Aloes: An audit of their phytotherapeutic potential.

Lobine D, Cummins I, Govinden-Soulange J, Ranghoo-Sanmukhiya M, Lindsey K, Chazot PL, Ambler CA, Grellscheid S, Sharples G, Lall N, Lambrechts IA, Lavergne C, Howes MR.

Fitoterapia. 2018 Jan;124:120-126. doi: 10.1016/j.fitote.2017.10.010. Epub 2017 Oct 21.


Cytology and high risk HPV testing in cervical cancer screening program: Outcome of 3-year follow-up in an academic institute.

Yang J, Nolte FS, Chajewski OS, Lindsey KG, Houser PM, Pellicier J, Wang Q, Ehsani L.

Diagn Cytopathol. 2018 Jan;46(1):22-27. doi: 10.1002/dc.23843. Epub 2017 Oct 19.


Bio-prospecting endemic Mascarene Aloes for potential neuroprotectants.

Lobine D, Howes MR, Cummins I, Govinden-Soulange J, Ranghoo-Sanmukhiya M, Lindsey K, Chazot PL.

Phytother Res. 2017 Dec;31(12):1926-1934. doi: 10.1002/ptr.5941. Epub 2017 Oct 11.


A global survey of alternative splicing in allopolyploid cotton: landscape, complexity and regulation.

Wang M, Wang P, Liang F, Ye Z, Li J, Shen C, Pei L, Wang F, Hu J, Tu L, Lindsey K, He D, Zhang X.

New Phytol. 2018 Jan;217(1):163-178. doi: 10.1111/nph.14762. Epub 2017 Sep 11.


A transgenic strategy for controlling plant bugs (Adelphocoris suturalis) through expression of double-stranded RNA homologous to fatty acyl-coenzyme A reductase in cotton.

Luo J, Liang S, Li J, Xu Z, Li L, Zhu B, Li Z, Lei C, Lindsey K, Chen L, Jin S, Zhang X.

New Phytol. 2017 Aug;215(3):1173-1185. doi: 10.1111/nph.14636. Epub 2017 Jun 13.


Myeloid sarcoma identified on liquid-based cervical cytology samples: A report of two cases.

Snider JS, Eichel Y, Caudell AM, Chajewski OS, Yang J, Lindsey KG.

Diagn Cytopathol. 2017 Oct;45(10):953-957. doi: 10.1002/dc.23763. Epub 2017 May 31.


Enterolactone Induces G1-phase Cell Cycle Arrest in Nonsmall Cell Lung Cancer Cells by Downregulating Cyclins and Cyclin-dependent Kinases.

Chikara S, Lindsey K, Dhillon H, Mamidi S, Kittilson J, Christofidou-Solomidou M, Reindl KM.

Nutr Cancer. 2017 May-Jun;69(4):652-662. doi: 10.1080/01635581.2017.1296169. Epub 2017 Mar 21.


Asymmetric subgenome selection and cis-regulatory divergence during cotton domestication.

Wang M, Tu L, Lin M, Lin Z, Wang P, Yang Q, Ye Z, Shen C, Li J, Zhang L, Zhou X, Nie X, Li Z, Guo K, Ma Y, Huang C, Jin S, Zhu L, Yang X, Min L, Yuan D, Zhang Q, Lindsey K, Zhang X.

Nat Genet. 2017 Apr;49(4):579-587. doi: 10.1038/ng.3807. Epub 2017 Mar 6.


A recovery principle provides insight into auxin pattern control in the Arabidopsis root.

Moore S, Liu J, Zhang X, Lindsey K.

Sci Rep. 2017 Feb 21;7:43004. doi: 10.1038/srep43004.


Enterolactone alters FAK-Src signaling and suppresses migration and invasion of lung cancer cell lines.

Chikara S, Lindsey K, Borowicz P, Christofidou-Solomidou M, Reindl KM.

BMC Complement Altern Med. 2017 Jan 9;17(1):30. doi: 10.1186/s12906-016-1512-3.


Young Investigator Challenge: A novel, simple method for cell block preparation, implementation, and use over 2 years.

Lindsey KG, Houser PM, Shotsberger-Gray W, Chajewski OS, Yang J.

Cancer Cytopathol. 2016 Dec;124(12):885-892. doi: 10.1002/cncy.21795. Epub 2016 Nov 9.


Correcting for Blood Arrival Time in Global Mean Regression Enhances Functional Connectivity Analysis of Resting State fMRI-BOLD Signals.

Erdoğan SB, Tong Y, Hocke LM, Lindsey KP, deB Frederick B.

Front Hum Neurosci. 2016 Jun 28;10:311. doi: 10.3389/fnhum.2016.00311. eCollection 2016.


Systemic Low-Frequency Oscillations in BOLD Signal Vary with Tissue Type.

Tong Y, Hocke LM, Lindsey KP, Erdoğan SB, Vitaliano G, Caine CE, Frederick Bd.

Front Neurosci. 2016 Jun 30;10:313. doi: 10.3389/fnins.2016.00313. eCollection 2016.


A case of erythropoietic protoporphyria.

Lindsey K, Burch M, Krause JR.

Proc (Bayl Univ Med Cent). 2016 Jul;29(3):311-2.


Cytological diagnosis of metastatic malignant melanoma by fine-needle aspiration biopsy.

Lindsey KG, Ingram C, Bergeron J, Yang J.

Semin Diagn Pathol. 2016 Jul;33(4):198-203. doi: 10.1053/j.semdp.2016.04.004. Epub 2016 Apr 16. Review.


ROS Homeostasis Regulates Somatic Embryogenesis via the Regulation of Auxin Signaling in Cotton.

Zhou T, Yang X, Guo K, Deng J, Xu J, Gao W, Lindsey K, Zhang X.

Mol Cell Proteomics. 2016 Jun;15(6):2108-24. doi: 10.1074/mcp.M115.049338. Epub 2016 Apr 12.


Cytopathologic features of clear cell papillary renal cell carcinoma: A recently described variant to be considered in the differential diagnosis of clear cell renal epithelial neoplasms.

Sayeed S, Lindsey KG, Baras AS, Jackson C, Powers CN, Uram-Tuculescu C, Smith SC.

Cancer Cytopathol. 2016 Aug;124(8):565-72. doi: 10.1002/cncy.21721. Epub 2016 Apr 7.


Using routine data to improve palliative and end of life care.

Davies JM, Gao W, Sleeman KE, Lindsey K, Murtagh FE, Teno JM, Deliens L, Wee B, Higginson IJ, Verne J.

BMJ Support Palliat Care. 2016 Sep;6(3):257-62. doi: 10.1136/bmjspcare-2015-000994. Epub 2016 Feb 28.


Abscisic acid regulates root growth under osmotic stress conditions via an interacting hormonal network with cytokinin, ethylene and auxin.

Rowe JH, Topping JF, Liu J, Lindsey K.

New Phytol. 2016 Jul;211(1):225-39. doi: 10.1111/nph.13882. Epub 2016 Feb 18.


Perfusion information extracted from resting state functional magnetic resonance imaging.

Tong Y, Lindsey KP, Hocke LM, Vitaliano G, Mintzopoulos D, Frederick BD.

J Cereb Blood Flow Metab. 2017 Feb;37(2):564-576. doi: 10.1177/0271678X16631755. Epub 2016 Jul 20.


Comparison of peripheral near-infrared spectroscopy low-frequency oscillations to other denoising methods in resting state functional MRI with ultrahigh temporal resolution.

Hocke LM, Tong Y, Lindsey KP, de B Frederick B.

Magn Reson Med. 2016 Dec;76(6):1697-1707. doi: 10.1002/mrm.26038. Epub 2016 Feb 7.


Time delay processing of hypercapnic fMRI allows quantitative parameterization of cerebrovascular reactivity and blood flow delays.

Donahue MJ, Strother MK, Lindsey KP, Hocke LM, Tong Y, Frederick BD.

J Cereb Blood Flow Metab. 2016 Oct;36(10):1767-1779. Epub 2015 Oct 19.


Effect of a Benzalkonium Chloride Surfactant-Sodium Hypochlorite Combination on Elimination of Enterococcus faecalis.

Baron A, Lindsey K, Sidow SJ, Dickinson D, Chuang A, McPherson JC 3rd.

J Endod. 2016 Jan;42(1):145-9. doi: 10.1016/j.joen.2015.08.035. Epub 2015 Nov 11.


Suppression of the homeobox gene HDTF1 enhances resistance to Verticillium dahliae and Botrytis cinerea in cotton.

Gao W, Long L, Xu L, Lindsey K, Zhang X, Zhu L.

J Integr Plant Biol. 2016 May;58(5):503-13. doi: 10.1111/jipb.12432. Epub 2015 Nov 21.


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