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Current Practices in Electronic Capture of Patient-Reported Outcomes for Measurement-Based Care and the Use of Patient Portals to Support Behavioral Health.

Turvey CL, Lindsay JA, Chasco EE, Klein DM, Fuhrmeister LA, Dindo LN.

Psychiatr Clin North Am. 2019 Dec;42(4):635-647. doi: 10.1016/j.psc.2019.08.006. Epub 2019 Oct 1. Review.


Clinical Lessons from Virtual House Calls in Mental Health: The Doctor Is in the House.

Hogan J, Boykin D, Schneck CD, Ecker AH, Fletcher TL, Lindsay JA, Shore JH.

Psychiatr Clin North Am. 2019 Dec;42(4):575-586. doi: 10.1016/j.psc.2019.08.004. Epub 2019 Oct 1. Review.


Personalized Implementation of Video Telehealth.

Lindsay JA, Day SC, Amspoker AB, Fletcher TL, Hogan J, Day G, Helm A, Stanley MA, Martin LA.

Psychiatr Clin North Am. 2019 Dec;42(4):563-574. doi: 10.1016/j.psc.2019.08.001. Epub 2019 Oct 1. Review.


Mathematical modelling to study the horizontal transfer of antimicrobial resistance genes in bacteria: current state of the field and recommendations.

Leclerc QJ, Lindsay JA, Knight GM.

J R Soc Interface. 2019 Aug 30;16(157):20190260. doi: 10.1098/rsif.2019.0260. Epub 2019 Aug 14.


Determinants of Phage Host Range in Staphylococcus Species.

Moller AG, Lindsay JA, Read TD.

Appl Environ Microbiol. 2019 May 16;85(11). pii: e00209-19. doi: 10.1128/AEM.00209-19. Print 2019 Jun 1. Review.


Implications of identifying the recently defined members of the Staphylococcus aureus complex S. argenteus and S. schweitzeri: a position paper of members of the ESCMID Study Group for Staphylococci and Staphylococcal Diseases (ESGS).

Becker K, Schaumburg F, Kearns A, Larsen AR, Lindsay JA, Skov RL, Westh H.

Clin Microbiol Infect. 2019 Sep;25(9):1064-1070. doi: 10.1016/j.cmi.2019.02.028. Epub 2019 Mar 11. Review.


Adapting Coordinated Anxiety Learning and Management for Veterans Affairs Community-Based Outpatient Clinics: Iterative Approach.

Abraham TH, Marchant-Miros K, McCarther MB, Craske MG, Curran GM, Kearney LK, Greene C, Lindsay JA, Cucciare MA.

JMIR Ment Health. 2018 Aug 22;5(3):e10277. doi: 10.2196/10277.


Recent Advances in Delivering Mental Health Treatment via Video to Home.

Fletcher TL, Hogan JB, Keegan F, Davis ML, Wassef M, Day S, Lindsay JA.

Curr Psychiatry Rep. 2018 Jul 21;20(8):56. doi: 10.1007/s11920-018-0922-y. Review.


Obsessive-compulsive disorder in the Veterans Health Administration.

Barrera TL, McIngvale E, Lindsay JA, Walder AM, Kauth MR, Smith TL, Van Kirk N, Teng EJ, Stanley MA.

Psychol Serv. 2019 Nov;16(4):605-611. doi: 10.1037/ser0000249. Epub 2018 May 24.


Survey for Listeria monocytogenes in and on Ready-to-Eat Foods from Retail Establishments in the United States (2010 through 2013): Assessing Potential Changes of Pathogen Prevalence and Levels in a Decade.

Luchansky JB, Chen Y, Porto-Fett ACS, Pouillot R, Shoyer BA, Johnson-DeRycke R, Eblen DR, Hoelzer K, Shaw WK Jr, van Doren JM, Catlin M, Lee J, Tikekar R, Gallagher D, Lindsay JA; Listeria Market Basket Survey Multi-Institutional Team, Dennis S.

J Food Prot. 2017 Jun;80(6):903-921. doi: 10.4315/0362-028X.JFP-16-420.


Resistance gene transfer: induction of transducing phage by sub-inhibitory concentrations of antimicrobials is not correlated to induction of lytic phage.

Stanczak-Mrozek KI, Laing KG, Lindsay JA.

J Antimicrob Chemother. 2017 Jun 1;72(6):1624-1631. doi: 10.1093/jac/dkx056.


DNA target recognition domains in the Type I restriction and modification systems of Staphylococcus aureus.

Cooper LP, Roberts GA, White JH, Luyten YA, Bower EKM, Morgan RD, Roberts RJ, Lindsay JA, Dryden DTF.

Nucleic Acids Res. 2017 Apr 7;45(6):3395-3406. doi: 10.1093/nar/gkx067.


Mental Health of Transgender Veterans of the Iraq and Afghanistan Conflicts Who Experienced Military Sexual Trauma.

Lindsay JA, Keo-Meier C, Hudson S, Walder A, Martin LA, Kauth MR.

J Trauma Stress. 2016 Dec;29(6):563-567. doi: 10.1002/jts.22146. Epub 2016 Nov 21.


Genomic insights into the emergence and spread of international clones of healthcare-, community- and livestock-associated meticillin-resistant Staphylococcus aureus: Blurring of the traditional definitions.

Bal AM, Coombs GW, Holden MTG, Lindsay JA, Nimmo GR, Tattevin P, Skov RL.

J Glob Antimicrob Resist. 2016 Sep;6:95-101. doi: 10.1016/j.jgar.2016.04.004. Epub 2016 May 17. Review.


The Type I Restriction Enzymes as Barriers to Horizontal Gene Transfer: Determination of the DNA Target Sequences Recognised by Livestock-Associated Methicillin-Resistant Staphylococcus aureus Clonal Complexes 133/ST771 and 398.

Chen K, Stephanou AS, Roberts GA, White JH, Cooper LP, Houston PJ, Lindsay JA, Dryden DT.

Adv Exp Med Biol. 2016;915:81-97. doi: 10.1007/978-3-319-32189-9_7. Erratum in: Adv Exp Med Biol. 2016;915:E1-E3.


Assessing fidelity of cognitive behavioral therapy in rural VA clinics: design of a randomized implementation effectiveness (hybrid type III) trial.

Cucciare MA, Curran GM, Craske MG, Abraham T, McCarthur MB, Marchant-Miros K, Lindsay JA, Kauth MR, Landes SJ, Sullivan G.

Implement Sci. 2016 May 10;11:65. doi: 10.1186/s13012-016-0432-4.


Interdisciplinary Transgender Veteran Care: Development of a Core Curriculum for VHA Providers.

Shipherd JC, Kauth MR, Firek AF, Garcia R, Mejia S, Laski S, Walden B, Perez-Padilla S, Lindsay JA, Brown G, Roybal L, Keo-Meier CL, Knapp H, Johnson L, Reese RL, Byne W.

Transgend Health. 2016 Feb 1;1(1):54-62. doi: 10.1089/trgh.2015.0004. eCollection 2016.


Teleconsultation and Training of VHA Providers on Transgender Care: Implementation of a Multisite Hub System.

Kauth MR, Shipherd JC, Lindsay JA, Kirsh S, Knapp H, Matza L.

Telemed J E Health. 2015 Dec;21(12):1012-8. doi: 10.1089/tmj.2015.0010. Epub 2015 Jul 14.


Manipulation of Autophagy in Phagocytes Facilitates Staphylococcus aureus Bloodstream Infection.

O'Keeffe KM, Wilk MM, Leech JM, Murphy AG, Laabei M, Monk IR, Massey RC, Lindsay JA, Foster TJ, Geoghegan JA, McLoughlin RM.

Infect Immun. 2015 Sep;83(9):3445-57. doi: 10.1128/IAI.00358-15. Epub 2015 Jun 22.


Within-host diversity of MRSA antimicrobial resistances.

Stanczak-Mrozek KI, Manne A, Knight GM, Gould K, Witney AA, Lindsay JA.

J Antimicrob Chemother. 2015 Aug;70(8):2191-8. doi: 10.1093/jac/dkv119. Epub 2015 May 8.


Evolutionary dynamics of methicillin-resistant Staphylococcus aureus within a healthcare system.

Hsu LY, Harris SR, Chlebowicz MA, Lindsay JA, Koh TH, Krishnan P, Tan TY, Hon PY, Grubb WB, Bentley SD, Parkhill J, Peacock SJ, Holden MT.

Genome Biol. 2015 Apr 23;16:81. doi: 10.1186/s13059-015-0643-z.


What Is the Origin of Livestock-Associated Methicillin-Resistant Staphylococcus aureus Clonal Complex 398 Isolates from Humans without Livestock Contact? An Epidemiological and Genetic Analysis.

Lekkerkerk WS, van Wamel WJ, Snijders SV, Willems RJ, van Duijkeren E, Broens EM, Wagenaar JA, Lindsay JA, Vos MC.

J Clin Microbiol. 2015 Jun;53(6):1836-41. doi: 10.1128/JCM.02702-14. Epub 2015 Mar 25.


Implementation of video telehealth to improve access to evidence-based psychotherapy for posttraumatic stress disorder.

Lindsay JA, Kauth MR, Hudson S, Martin LA, Ramsey DJ, Daily L, Rader J.

Telemed J E Health. 2015 Jun;21(6):467-72. doi: 10.1089/tmj.2014.0114. Epub 2015 Feb 25.


Transmission of antimicrobial resistance in resource-poor healthcare.

Lindsay JA.

Trends Microbiol. 2015 Feb;23(2):69-70. doi: 10.1016/j.tim.2015.01.001. Epub 2015 Jan 13.


Genomic insights into the rapid emergence and evolution of MDR in Staphylococcus pseudintermedius.

McCarthy AJ, Harrison EM, Stanczak-Mrozek K, Leggett B, Waller A, Holmes MA, Lloyd DH, Lindsay JA, Loeffler A.

J Antimicrob Chemother. 2015 Apr;70(4):997-1007. doi: 10.1093/jac/dku496. Epub 2014 Dec 18.


Extensive horizontal gene transfer during Staphylococcus aureus co-colonization in vivo.

McCarthy AJ, Loeffler A, Witney AA, Gould KA, Lloyd DH, Lindsay JA.

Genome Biol Evol. 2014 Sep 25;6(10):2697-708. doi: 10.1093/gbe/evu214.


Fructose transport-deficient Staphylococcus aureus reveals important role of epithelial glucose transporters in limiting sugar-driven bacterial growth in airway surface liquid.

Garnett JP, Braun D, McCarthy AJ, Farrant MR, Baker EH, Lindsay JA, Baines DL.

Cell Mol Life Sci. 2014 Dec;71(23):4665-73. doi: 10.1007/s00018-014-1635-y. Epub 2014 May 9.


Staphylococcus aureus genomics and the impact of horizontal gene transfer.

Lindsay JA.

Int J Med Microbiol. 2014 Mar;304(2):103-9. doi: 10.1016/j.ijmm.2013.11.010. Epub 2013 Dec 1. Review.


A two-phased screening paradigm for evaluating candidate medications for cocaine cessation or relapse prevention: modafinil, levodopa-carbidopa, naltrexone.

Schmitz JM, Green CE, Stotts AL, Lindsay JA, Rathnayaka NS, Grabowski J, Moeller FG.

Drug Alcohol Depend. 2014 Mar 1;136:100-7. doi: 10.1016/j.drugalcdep.2013.12.015. Epub 2014 Jan 3.


Characterization and comparison of 2 distinct epidemic community-associated methicillin-resistant Staphylococcus aureus clones of ST59 lineage.

Chen CJ, Unger C, Hoffmann W, Lindsay JA, Huang YC, Götz F.

PLoS One. 2013 Sep 5;8(9):e63210. doi: 10.1371/journal.pone.0063210. eCollection 2013.


Using prize-based incentives to enhance daily interactive voice response (IVR) compliance: a feasibility study.

Lindsay JA, Minard CG, Hudson S, Green CE, Schmitz JM.

J Subst Abuse Treat. 2014 Jan;46(1):74-7. doi: 10.1016/j.jsat.2013.08.003. Epub 2013 Sep 9.


Whole-genome comparison of meticillin-resistant Staphylococcus aureus CC22 SCCmecIV from people and their in-contact pets.

Loeffler A, McCarthy A, Lloyd DH, Musilová E, Pfeiffer DU, Lindsay JA.

Vet Dermatol. 2013 Oct;24(5):538-e128. doi: 10.1111/vde.12062. Epub 2013 Jul 19.


Staphylococcus aureus innate immune evasion is lineage-specific: a bioinfomatics study.

McCarthy AJ, Lindsay JA.

Infect Genet Evol. 2013 Oct;19:7-14. doi: 10.1016/j.meegid.2013.06.012. Epub 2013 Jun 19.


Impact of target site distribution for Type I restriction enzymes on the evolution of methicillin-resistant Staphylococcus aureus (MRSA) populations.

Roberts GA, Houston PJ, White JH, Chen K, Stephanou AS, Cooper LP, Dryden DT, Lindsay JA.

Nucleic Acids Res. 2013 Aug;41(15):7472-84. doi: 10.1093/nar/gkt535. Epub 2013 Jun 14.


Large mobile genetic elements carrying resistance genes that do not confer a fitness burden in healthcare-associated meticillin-resistant Staphylococcus aureus.

Knight GM, Budd EL, Lindsay JA.

Microbiology. 2013 Aug;159(Pt 8):1661-72. doi: 10.1099/mic.0.068551-0. Epub 2013 May 31.


Metformin reduces airway glucose permeability and hyperglycaemia-induced Staphylococcus aureus load independently of effects on blood glucose.

Garnett JP, Baker EH, Naik S, Lindsay JA, Knight GM, Gill S, Tregoning JS, Baines DL.

Thorax. 2013 Sep;68(9):835-45. doi: 10.1136/thoraxjnl-2012-203178. Epub 2013 May 24.


Evolution of Staphylococcus aureus and MRSA during outbreaks.

Lindsay JA.

Infect Genet Evol. 2014 Jan;21:548-53. doi: 10.1016/j.meegid.2013.04.017. Epub 2013 May 7.


Hospital-associated MRSA and antibiotic resistance-what have we learned from genomics?

Lindsay JA.

Int J Med Microbiol. 2013 Aug;303(6-7):318-23. doi: 10.1016/j.ijmm.2013.02.005. Epub 2013 Mar 15. Review.


Shuffling of mobile genetic elements (MGEs) in successful healthcare-associated MRSA (HA-MRSA).

Lindsay JA, Knight GM, Budd EL, McCarthy AJ.

Mob Genet Elements. 2012 Sep 1;2(5):239-243.


The alpha-1 adrenergic antagonist doxazosin for treatment of cocaine dependence: A pilot study.

Shorter D, Lindsay JA, Kosten TR.

Drug Alcohol Depend. 2013 Jul 1;131(1-2):66-70. doi: 10.1016/j.drugalcdep.2012.11.021. Epub 2013 Jan 8.


Comparative host specificity of human- and pig- associated Staphylococcus aureus clonal lineages.

Moodley A, Espinosa-Gongora C, Nielsen SS, McCarthy AJ, Lindsay JA, Guardabassi L.

PLoS One. 2012;7(11):e49344. doi: 10.1371/journal.pone.0049344. Epub 2012 Nov 14.


Survival of Staphylococcus aureus ST398 in the human nose after artificial inoculation.

Slingerland BC, Tavakol M, McCarthy AJ, Lindsay JA, Snijders SV, Wagenaar JA, van Belkum A, Vos MC, Verbrugh HA, van Wamel WJ.

PLoS One. 2012;7(11):e48896. doi: 10.1371/journal.pone.0048896. Epub 2012 Nov 14.


Staphylococcus aureus CC398 clade associated with human-to-human transmission.

McCarthy AJ, van Wamel W, Vandendriessche S, Larsen J, Denis O, Garcia-Graells C, Uhlemann AC, Lowy FD, Skov R, Lindsay JA.

Appl Environ Microbiol. 2012 Dec;78(24):8845-8. doi: 10.1128/AEM.02398-12. Epub 2012 Oct 5.


Staphylococcus aureus temperate bacteriophage: carriage and horizontal gene transfer is lineage associated.

McCarthy AJ, Witney AA, Lindsay JA.

Front Cell Infect Microbiol. 2012 Feb 8;2:6. doi: 10.3389/fcimb.2012.00006. eCollection 2012.


Are all meticillin-resistant Staphylococcus aureus (MRSA) equal in all hosts? Epidemiological and genetic comparison between animal and human MRSA.

McCarthy AJ, Lindsay JA, Loeffler A.

Vet Dermatol. 2012 Aug;23(4):267-75, e53-4. doi: 10.1111/j.1365-3164.2012.01072.x.


Shift in dominant hospital-associated methicillin-resistant Staphylococcus aureus (HA-MRSA) clones over time.

Knight GM, Budd EL, Whitney L, Thornley A, Al-Ghusein H, Planche T, Lindsay JA.

J Antimicrob Chemother. 2012 Oct;67(10):2514-22. doi: 10.1093/jac/dks245. Epub 2012 Jul 3.


The distribution of plasmids that carry virulence and resistance genes in Staphylococcus aureus is lineage associated.

McCarthy AJ, Lindsay JA.

BMC Microbiol. 2012 Jun 12;12:104. doi: 10.1186/1471-2180-12-104.


Major families of multiresistant plasmids from geographically and epidemiologically diverse staphylococci.

Shearer JE, Wireman J, Hostetler J, Forberger H, Borman J, Gill J, Sanchez S, Mankin A, Lamarre J, Lindsay JA, Bayles K, Nicholson A, O'Brien F, Jensen SO, Firth N, Skurray RA, Summers AO.

G3 (Bethesda). 2011 Dec;1(7):581-91. doi: 10.1534/g3.111.000760. Epub 2011 Dec 1.


Identification of a highly transmissible animal-independent Staphylococcus aureus ST398 clone with distinct genomic and cell adhesion properties.

Uhlemann AC, Porcella SF, Trivedi S, Sullivan SB, Hafer C, Kennedy AD, Barbian KD, McCarthy AJ, Street C, Hirschberg DL, Lipkin WI, Lindsay JA, DeLeo FR, Lowy FD.

MBio. 2012 Feb 28;3(2). pii: e00027-12. doi: 10.1128/mBio.00027-12. Print 2012.

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