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Items: 1 to 50 of 167

1.

Correction to: vigiGrade: A Tool to Identify Well-Documented Individual Case Reports and Highlight Systematic Data Quality Issues.

Bergvall T, Norén GN, Lindquist M.

Drug Saf. 2019 Mar 12. doi: 10.1007/s40264-019-00803-8. [Epub ahead of print]

PMID:
30863920
2.

Fatigue induces long lasting detrimental changes in motor skill learning.

Branscheidt M, Kassavetis P, Anaya M, Rogers D, Huang HD, Lindquist MA, Celnik P.

Elife. 2019 Mar 5;8. pii: e40578. doi: 10.7554/eLife.40578. [Epub ahead of print]

3.

Rethinking interhemispheric imbalance as a target for stroke neurorehabilitation.

Xu J, Branscheidt M, Schambra H, Steiner L, Widmer M, Diedrichsen J, Goldsmith J, Lindquist M, Kitago T, Luft AR, Krakauer JW, Celnik PA; SMARTS Study Group.

Ann Neurol. 2019 Feb 25. doi: 10.1002/ana.25452. [Epub ahead of print]

PMID:
30805956
4.

Improved state change estimation in dynamic functional connectivity using hidden semi-Markov models.

Shappell H, Caffo BS, Pekar JJ, Lindquist MA.

Neuroimage. 2019 Feb 10;191:243-257. doi: 10.1016/j.neuroimage.2019.02.013. [Epub ahead of print]

PMID:
30753927
5.

Pain-Related Nucleus Accumbens Function: Modulation by Reward and Sleep Disruption.

Seminowicz DA, Remeniuk B, Krimmel SR, Smith MT, Barrett FS, Wulff AB, Furman AJ, Geuter S, Lindquist MA, Irwin MR, Finan PH.

Pain. 2019 Feb 8. doi: 10.1097/j.pain.0000000000001498. [Epub ahead of print]

PMID:
30753171
6.

The Pain of Sleep Loss: A Brain Characterization in Humans.

Krause AJ, Prather AA, Wager TD, Lindquist MA, Walker MP.

J Neurosci. 2019 Mar 20;39(12):2291-2300. doi: 10.1523/JNEUROSCI.2408-18.2018. Epub 2019 Jan 28.

PMID:
30692228
7.

Modular preprocessing pipelines can reintroduce artifacts into fMRI data.

Lindquist MA, Geuter S, Wager TD, Caffo BS.

Hum Brain Mapp. 2019 Jan 21. doi: 10.1002/hbm.24528. [Epub ahead of print]

PMID:
30666750
8.

Workshop on the Italian Pharmacovigilance System in the International Context: Critical Issues and Perspectives.

Sultana J, Moretti U, Addis A, Caduff P, Capuano A, Kant A, Laporte JR, Lindquist M, Raine J, Sartori D, Trifirò G, Tuccori M, Venegoni M, van Puijenbroek E, Leone R.

Drug Saf. 2018 Dec 18. doi: 10.1007/s40264-018-0768-6. [Epub ahead of print] No abstract available.

PMID:
30565019
9.

Exposure-based therapy changes amygdala and hippocampus resting-state functional connectivity in patients with posttraumatic stress disorder.

Zhu X, Suarez-Jimenez B, Lazarov A, Helpman L, Papini S, Lowell A, Durosky A, Lindquist MA, Markowitz JC, Schneier F, Wager TD, Neria Y.

Depress Anxiety. 2018 Oct;35(10):974-984. doi: 10.1002/da.22816. Epub 2018 Sep 10.

PMID:
30260530
10.

Exploring Crimean-Congo Hemorrhagic Fever Virus-Induced Hepatic Injury Using Antibody-Mediated Type I Interferon Blockade in Mice.

Lindquist ME, Zeng X, Altamura LA, Daye SP, Delp KL, Blancett C, Coffin KM, Koehler JW, Coyne S, Shoemaker CJ, Garrison AR, Golden JW.

J Virol. 2018 Oct 12;92(21). pii: e01083-18. doi: 10.1128/JVI.01083-18. Print 2018 Nov 1.

11.

Connectivity in fMRI: Blind Spots and Breakthroughs.

Solo V, Poline JB, Lindquist MA, Simpson SL, Bowman FD, Chung MK, Cassidy B.

IEEE Trans Med Imaging. 2018 Jul;37(7):1537-1550. doi: 10.1109/TMI.2018.2831261.

PMID:
29969406
12.

Dynamic Functional Connectivity States Reflecting Psychotic-like Experiences.

Barber AD, Lindquist MA, DeRosse P, Karlsgodt KH.

Biol Psychiatry Cogn Neurosci Neuroimaging. 2018 May;3(5):443-453. doi: 10.1016/j.bpsc.2017.09.008. Epub 2017 Sep 28.

PMID:
29735154
13.

Multivariate machine learning distinguishes cross-network dynamic functional connectivity patterns in state and trait neuropathic pain.

Cheng JC, Rogachov A, Hemington KS, Kucyi A, Bosma RL, Lindquist MA, Inman RD, Davis KD.

Pain. 2018 Sep;159(9):1764-1776. doi: 10.1097/j.pain.0000000000001264.

PMID:
29708944
14.

Comment on "Safety of Human Papillomavirus Vaccines: An Updated Review".

Chandler RE, Edwards IR, Lindquist M.

Drug Saf. 2018 May;41(5):537-538. doi: 10.1007/s40264-018-0657-z. No abstract available.

15.

An M-estimator for reduced-rank system identification.

Chen S, Liu K, Yang Y, Xu Y, Lee S, Lindquist M, Caffo BS, Vogelstein JT.

Pattern Recognit Lett. 2017 Jan 15;86:76-81. doi: 10.1016/j.patrec.2016.12.012. Epub 2016 Dec 19.

16.

Improved estimation of subject-level functional connectivity using full and partial correlation with empirical Bayes shrinkage.

Mejia AF, Nebel MB, Barber AD, Choe AS, Pekar JJ, Caffo BS, Lindquist MA.

Neuroimage. 2018 May 15;172:478-491. doi: 10.1016/j.neuroimage.2018.01.029. Epub 2018 Feb 14.

PMID:
29391241
17.

Big Data and Neuroimaging.

Webb-Vargas Y, Chen S, Fisher A, Mejia A, Xu Y, Crainiceanu C, Caffo B, Lindquist MA.

Stat Biosci. 2017 Dec;9(2):543-558. doi: 10.1007/s12561-017-9195-y. Epub 2017 May 22.

18.

[Register for new drugs in cancer care provides a picture of how the drugs are used in the daily clinical practice].

Henriksson R, Falkenius J, Norin S, Öhman D, Abrahamsson M, Lindquist M, Lööv SÅ.

Lakartidningen. 2017 Nov 6;114. pii: ETTF. Swedish.

19.

Alterations in the host transcriptome in vitro following Rift Valley fever virus infection.

Pinkham C, Dahal B, de la Fuente CL, Bracci N, Beitzel B, Lindquist M, Garrison A, Schmaljohn C, Palacios G, Narayanan A, Campbell CE, Kehn-Hall K.

Sci Rep. 2017 Oct 30;7(1):14385. doi: 10.1038/s41598-017-14800-3.

20.

Intracellular Detection of Viral Transcription and Replication Using RNA FISH.

Lindquist ME, Schmaljohn CS.

Methods Mol Biol. 2018;1604:201-207. doi: 10.1007/978-1-4939-6981-4_14.

PMID:
28986835
21.

Dynamic Functional Connectivity States Between the Dorsal and Ventral Sensorimotor Networks Revealed by Dynamic Conditional Correlation Analysis of Resting-State Functional Magnetic Resonance Imaging.

Syed MF, Lindquist MA, Pillai JJ, Agarwal S, Gujar SK, Choe AS, Caffo B, Sair HI.

Brain Connect. 2017 Dec;7(10):635-642. doi: 10.1089/brain.2017.0533.

PMID:
28969437
22.

Altered cortical brain activity in end stage liver disease assessed by multi-channel near-infrared spectroscopy: Associations with delirium.

Yoshimura A, Goodson C, Johns JT, Towe MM, Irvine ES, Rendradjaja NA, Max LK, LaFlam A, Ledford EC, Probert J, Tieges Z, Edwin DH, MacLullich AMJ, Hogue CW, Lindquist MA, Gurakar A, Neufeld KJ, Kamiya A.

Sci Rep. 2017 Aug 23;7(1):9258. doi: 10.1038/s41598-017-10024-7.

23.

Comparing test-retest reliability of dynamic functional connectivity methods.

Choe AS, Nebel MB, Barber AD, Cohen JR, Xu Y, Pekar JJ, Caffo B, Lindquist MA.

Neuroimage. 2017 Sep;158:155-175. doi: 10.1016/j.neuroimage.2017.07.005. Epub 2017 Jul 5.

24.

High-dimensional multivariate mediation with application to neuroimaging data.

Chén OY, Crainiceanu C, Ogburn EL, Caffo BS, Wager TD, Lindquist MA.

Biostatistics. 2018 Apr 1;19(2):121-136. doi: 10.1093/biostatistics/kxx027.

PMID:
28637279
25.

Slow-5 dynamic functional connectivity reflects the capacity to sustain cognitive performance during pain.

Cheng JC, Bosma RL, Hemington KS, Kucyi A, Lindquist MA, Davis KD.

Neuroimage. 2017 Aug 15;157:61-68. doi: 10.1016/j.neuroimage.2017.06.005. Epub 2017 Jun 3.

PMID:
28583880
26.

A Bayesian heteroscedastic GLM with application to fMRI data with motion spikes.

Eklund A, Lindquist MA, Villani M.

Neuroimage. 2017 Jul 15;155:354-369. doi: 10.1016/j.neuroimage.2017.04.069. Epub 2017 May 1.

PMID:
28473287
27.

Response variability of different anodal transcranial direct current stimulation intensities across multiple sessions.

Ammann C, Lindquist MA, Celnik PA.

Brain Stimul. 2017 Jul - Aug;10(4):757-763. doi: 10.1016/j.brs.2017.04.003. Epub 2017 Apr 10.

28.

Presurgical Brain Mapping of the Ventral Somatomotor Network in Patients with Brain Tumors Using Resting-State fMRI.

Yahyavi-Firouz-Abadi N, Pillai JJ, Lindquist MA, Calhoun VD, Agarwal S, Airan RD, Caffo B, Gujar SK, Sair HI.

AJNR Am J Neuroradiol. 2017 May;38(5):1006-1012. doi: 10.3174/ajnr.A5132. Epub 2017 Mar 31.

29.

Utilization of inulin-containing waste in industrial fermentations to produce biofuels and bio-based chemicals.

Hughes SR, Qureshi N, López-Núñez JC, Jones MA, Jarodsky JM, Galindo-Leva LÁ, Lindquist MR.

World J Microbiol Biotechnol. 2017 Apr;33(4):78. doi: 10.1007/s11274-017-2241-6. Epub 2017 Mar 24. Review.

PMID:
28341907
30.

PCA leverage: outlier detection for high-dimensional functional magnetic resonance imaging data.

Mejia AF, Nebel MB, Eloyan A, Caffo B, Lindquist MA.

Biostatistics. 2017 Jul 1;18(3):521-536. doi: 10.1093/biostatistics/kxw050.

31.

Parallel group independent component analysis for massive fMRI data sets.

Chen S, Huang L, Qiu H, Nebel MB, Mostofsky SH, Pekar JJ, Lindquist MA, Eloyan A, Caffo BS.

PLoS One. 2017 Mar 9;12(3):e0173496. doi: 10.1371/journal.pone.0173496. eCollection 2017.

32.

Building better biomarkers: brain models in translational neuroimaging.

Woo CW, Chang LJ, Lindquist MA, Wager TD.

Nat Neurosci. 2017 Feb 23;20(3):365-377. doi: 10.1038/nn.4478. Review.

33.

Quantifying cerebral contributions to pain beyond nociception.

Woo CW, Schmidt L, Krishnan A, Jepma M, Roy M, Lindquist MA, Atlas LY, Wager TD.

Nat Commun. 2017 Feb 14;8:14211. doi: 10.1038/ncomms14211.

34.

Assessing uncertainty in dynamic functional connectivity.

Kudela M, Harezlak J, Lindquist MA.

Neuroimage. 2017 Apr 1;149:165-177. doi: 10.1016/j.neuroimage.2017.01.056. Epub 2017 Jan 27.

35.

Developing a Crowdsourcing Approach and Tool for Pharmacovigilance Education Material Delivery.

Bate A, Beckmann J, Dodoo A, Härmark L, Hartigan-Go K, Hegerius A, Lindquist M, van Puijenbroek E, Tuccori M, Hagemann U.

Drug Saf. 2017 Mar;40(3):191-199. doi: 10.1007/s40264-016-0495-9.

PMID:
28101815
36.

Effect Size Estimation in Neuroimaging.

Reddan MC, Lindquist MA, Wager TD.

JAMA Psychiatry. 2017 Mar 1;74(3):207-208. doi: 10.1001/jamapsychiatry.2016.3356. No abstract available.

PMID:
28099973
37.

Generalizability of Neuroimaging Studies in 5 Common Psychiatric Disorders Based on the National Epidemiologic Survey on Alcohol and Related Conditions (NESARC).

Blanco C, Wall MM, Lindquist MA, Rodríguez-Fernández JM, Franco S, Wang S, Olfson M.

J Clin Psychiatry. 2016 Dec;77(12):e1618-e1625. doi: 10.4088/JCP.15m10264.

PMID:
28086006
38.

Altered resting state functional connectivity of fear and reward circuitry in comorbid PTSD and major depression.

Zhu X, Helpman L, Papini S, Schneier F, Markowitz JC, Van Meter PE, Lindquist MA, Wager TD, Neria Y.

Depress Anxiety. 2017 Jul;34(7):641-650. doi: 10.1002/da.22594. Epub 2016 Dec 28.

39.

Neural changes in extinction recall following prolonged exposure treatment for PTSD: A longitudinal fMRI study.

Helpman L, Marin MF, Papini S, Zhu X, Sullivan GM, Schneier F, Neria M, Shvil E, Malaga Aragon MJ, Markowitz JC, Lindquist MA, Wager T, Milad M, Neria Y.

Neuroimage Clin. 2016 Oct 10;12:715-723. eCollection 2016.

40.

Two-way principal component analysis for matrix-variate data, with an application to functional magnetic resonance imaging data.

Huang L, Reiss PT, Xiao L, Zipunnikov V, Lindquist MA, Crainiceanu CM.

Biostatistics. 2017 Apr 1;18(2):214-229. doi: 10.1093/biostatistics/kxw040.

41.

A Multicomponent Animal Virus Isolated from Mosquitoes.

Ladner JT, Wiley MR, Beitzel B, Auguste AJ, Dupuis AP 2nd, Lindquist ME, Sibley SD, Kota KP, Fetterer D, Eastwood G, Kimmel D, Prieto K, Guzman H, Aliota MT, Reyes D, Brueggemann EE, St John L, Hyeroba D, Lauck M, Friedrich TC, O'Connor DH, Gestole MC, Cazares LH, Popov VL, Castro-Llanos F, Kochel TJ, Kenny T, White B, Ward MD, Loaiza JR, Goldberg TL, Weaver SC, Kramer LD, Tesh RB, Palacios G.

Cell Host Microbe. 2016 Sep 14;20(3):357-367. doi: 10.1016/j.chom.2016.07.011. Epub 2016 Aug 25.

42.

Development and validation of a generic finite element vehicle buck model for the analysis of driver rib fractures in real life nearside oblique frontal crashes.

Iraeus J, Lindquist M.

Accid Anal Prev. 2016 Oct;95(Pt A):42-56. doi: 10.1016/j.aap.2016.06.020. Epub 2016 Jul 7.

PMID:
27393912
43.

fslr: Connecting the FSL Software with R.

Muschelli J, Sweeney E, Lindquist M, Crainiceanu C.

R J. 2015 Jun;7(1):163-175.

44.

Imaging network level language recovery after left PCA stroke.

Sebastian R, Long C, Purcell JJ, Faria AV, Lindquist M, Jarso S, Race D, Davis C, Posner J, Wright A, Hillis AE.

Restor Neurol Neurosci. 2016 May 11;34(4):473-89. doi: 10.3233/RNN-150621.

45.

Growth, ethanol production, and inulinase activity on various inulin substrates by mutant Kluyveromyces marxianus strains NRRL Y-50798 and NRRL Y-50799.

Galindo-Leva LÁ, Hughes SR, López-Núñez JC, Jarodsky JM, Erickson A, Lindquist MR, Cox EJ, Bischoff KM, Hoecker EC, Liu S, Qureshi N, Jones MA.

J Ind Microbiol Biotechnol. 2016 Jul;43(7):927-39. doi: 10.1007/s10295-016-1771-5. Epub 2016 Apr 29.

46.

Demonstration of Brain Tumor-Induced Neurovascular Uncoupling in Resting-State fMRI at Ultrahigh Field.

Agarwal S, Sair HI, Airan R, Hua J, Jones CK, Heo HY, Olivi A, Lindquist MA, Pekar JJ, Pillai JJ.

Brain Connect. 2016 May;6(4):267-72. doi: 10.1089/brain.2015.0402. Epub 2016 Feb 26.

47.

Presurgical brain mapping of the language network in patients with brain tumors using resting-state fMRI: Comparison with task fMRI.

Sair HI, Yahyavi-Firouz-Abadi N, Calhoun VD, Airan RD, Agarwal S, Intrapiromkul J, Choe AS, Gujar SK, Caffo B, Lindquist MA, Pillai JJ.

Hum Brain Mapp. 2016 Mar;37(3):913-23. doi: 10.1002/hbm.23075. Epub 2015 Dec 10.

PMID:
26663615
48.

Group-regularized individual prediction: theory and application to pain.

Lindquist MA, Krishnan A, López-Solà M, Jepma M, Woo CW, Koban L, Roy M, Atlas LY, Schmidt L, Chang LJ, Reynolds Losin EA, Eisenbarth H, Ashar YK, Delk E, Wager TD.

Neuroimage. 2017 Jan 15;145(Pt B):274-287. doi: 10.1016/j.neuroimage.2015.10.074. Epub 2015 Nov 17.

49.

Reproducibility and Temporal Structure in Weekly Resting-State fMRI over a Period of 3.5 Years.

Choe AS, Jones CK, Joel SE, Muschelli J, Belegu V, Caffo BS, Lindquist MA, van Zijl PC, Pekar JJ.

PLoS One. 2015 Oct 30;10(10):e0140134. doi: 10.1371/journal.pone.0140134. eCollection 2015.

50.

Dynamic connectivity detection: an algorithm for determining functional connectivity change points in fMRI data.

Xu Y, Lindquist MA.

Front Neurosci. 2015 Sep 4;9:285. doi: 10.3389/fnins.2015.00285. eCollection 2015.

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