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Items: 1 to 50 of 65

1.

Prehistoric migrations through the Mediterranean basin shaped Corsican Y-chromosome diversity.

Di Cristofaro J, Mazières S, Tous A, Di Gaetano C, Lin AA, Nebbia P, Piazza A, King RJ, Underhill P, Chiaroni J.

PLoS One. 2018 Aug 1;13(8):e0200641. doi: 10.1371/journal.pone.0200641. eCollection 2018.

2.

Safety, tumor trafficking and immunogenicity of chimeric antigen receptor (CAR)-T cells specific for TAG-72 in colorectal cancer.

Hege KM, Bergsland EK, Fisher GA, Nemunaitis JJ, Warren RS, McArthur JG, Lin AA, Schlom J, June CH, Sherwin SA.

J Immunother Cancer. 2017 Mar 21;5:22. doi: 10.1186/s40425-017-0222-9. eCollection 2017.

3.

Long-Term Training with a Brain-Machine Interface-Based Gait Protocol Induces Partial Neurological Recovery in Paraplegic Patients.

Donati AR, Shokur S, Morya E, Campos DS, Moioli RC, Gitti CM, Augusto PB, Tripodi S, Pires CG, Pereira GA, Brasil FL, Gallo S, Lin AA, Takigami AK, Aratanha MA, Joshi S, Bleuler H, Cheng G, Rudolph A, Nicolelis MA.

Sci Rep. 2016 Aug 11;6:30383. doi: 10.1038/srep30383.

4.

Ultrasound evaluation of glaucoma drainage devices in children.

Baig NB, Lin AA, Freedman SF.

J AAPOS. 2015 Jun;19(3):281-4. doi: 10.1016/j.jaapos.2015.02.001. Epub 2015 Apr 21.

PMID:
25907830
5.

The phylogenetic and geographic structure of Y-chromosome haplogroup R1a.

Underhill PA, Poznik GD, Rootsi S, Järve M, Lin AA, Wang J, Passarelli B, Kanbar J, Myres NM, King RJ, Di Cristofaro J, Sahakyan H, Behar DM, Kushniarevich A, Sarac J, Saric T, Rudan P, Pathak AK, Chaubey G, Grugni V, Semino O, Yepiskoposyan L, Bahmanimehr A, Farjadian S, Balanovsky O, Khusnutdinova EK, Herrera RJ, Chiaroni J, Bustamante CD, Quake SR, Kivisild T, Villems R.

Eur J Hum Genet. 2015 Jan;23(1):124-31. doi: 10.1038/ejhg.2014.50. Epub 2014 Mar 26.

6.

Phylogenetic applications of whole Y-chromosome sequences and the Near Eastern origin of Ashkenazi Levites.

Rootsi S, Behar DM, Järve M, Lin AA, Myres NM, Passarelli B, Poznik GD, Tzur S, Sahakyan H, Pathak AK, Rosset S, Metspalu M, Grugni V, Semino O, Metspalu E, Bustamante CD, Skorecki K, Villems R, Kivisild T, Underhill PA.

Nat Commun. 2013;4:2928. doi: 10.1038/ncomms3928.

7.

Afghan Hindu Kush: where Eurasian sub-continent gene flows converge.

Di Cristofaro J, Pennarun E, Mazières S, Myres NM, Lin AA, Temori SA, Metspalu M, Metspalu E, Witzel M, King RJ, Underhill PA, Villems R, Chiaroni J.

PLoS One. 2013 Oct 18;8(10):e76748. doi: 10.1371/journal.pone.0076748. eCollection 2013.

8.

Sequencing Y chromosomes resolves discrepancy in time to common ancestor of males versus females.

Poznik GD, Henn BM, Yee MC, Sliwerska E, Euskirchen GM, Lin AA, Snyder M, Quintana-Murci L, Kidd JM, Underhill PA, Bustamante CD.

Science. 2013 Aug 2;341(6145):562-5. doi: 10.1126/science.1237619.

10.

Distinguishing the co-ancestries of haplogroup G Y-chromosomes in the populations of Europe and the Caucasus.

Rootsi S, Myres NM, Lin AA, Järve M, King RJ, Kutuev I, Cabrera VM, Khusnutdinova EK, Varendi K, Sahakyan H, Behar DM, Khusainova R, Balanovsky O, Balanovska E, Rudan P, Yepiskoposyan L, Bahmanimehr A, Farjadian S, Kushniarevich A, Herrera RJ, Grugni V, Battaglia V, Nici C, Crobu F, Karachanak S, Hooshiar Kashani B, Houshmand M, Sanati MH, Toncheva D, Lisa A, Semino O, Chiaroni J, Di Cristofaro J, Villems R, Kivisild T, Underhill PA.

Eur J Hum Genet. 2012 Dec;20(12):1275-82. doi: 10.1038/ejhg.2012.86. Epub 2012 May 16.

11.

Geobacillus thermodenitrificans YjbH recognizes the C-terminal end of Bacillus subtilis Spx to accelerate Spx proteolysis by ClpXP.

Chan CM, Garg S, Lin AA, Zuber P.

Microbiology. 2012 May;158(Pt 5):1268-78. doi: 10.1099/mic.0.057661-0. Epub 2012 Feb 16.

12.

Evidence that a single monomer of Spx can productively interact with RNA polymerase in Bacillus subtilis.

Lin AA, Zuber P.

J Bacteriol. 2012 Apr;194(7):1697-707. doi: 10.1128/JB.06660-11. Epub 2012 Feb 3.

13.

Overcoming challenges in WAVE Bioreactors without feedback controls for pH and dissolved oxygen.

Yuk IH, Baskar D, Duffy PH, Hsiung J, Leung S, Lin AA.

Biotechnol Prog. 2011 Sep-Oct;27(5):1397-406. doi: 10.1002/btpr.659. Epub 2011 Jul 11.

PMID:
21987370
14.

Culture temperature modulates aggregation of recombinant antibody in cho cells.

Gomez N, Subramanian J, Ouyang J, Nguyen MD, Hutchinson M, Sharma VK, Lin AA, Yuk IH.

Biotechnol Bioeng. 2012 Jan;109(1):125-36. doi: 10.1002/bit.23288. Epub 2011 Oct 3.

PMID:
21965146
15.

Phenotype enhancement screen of a regulatory spx mutant unveils a role for the ytpQ gene in the control of iron homeostasis.

Zuber P, Chauhan S, Pilaka P, Nakano MM, Gurumoorthy S, Lin AA, Barendt SM, Chi BK, Antelmann H, Mäder U.

PLoS One. 2011;6(9):e25066. doi: 10.1371/journal.pone.0025066. Epub 2011 Sep 20.

16.

The coming of the Greeks to Provence and Corsica: Y-chromosome models of archaic Greek colonization of the western Mediterranean.

King RJ, Di Cristofaro J, Kouvatsi A, Triantaphyllidis C, Scheidel W, Myres NM, Lin AA, Eissautier A, Mitchell M, Binder D, Semino O, Novelletto A, Underhill PA, Chiaroni J.

BMC Evol Biol. 2011 Mar 14;11:69. doi: 10.1186/1471-2148-11-69.

17.

Hunter-gatherer genomic diversity suggests a southern African origin for modern humans.

Henn BM, Gignoux CR, Jobin M, Granka JM, Macpherson JM, Kidd JM, Rodríguez-Botigué L, Ramachandran S, Hon L, Brisbin A, Lin AA, Underhill PA, Comas D, Kidd KK, Norman PJ, Parham P, Bustamante CD, Mountain JL, Feldman MW.

Proc Natl Acad Sci U S A. 2011 Mar 29;108(13):5154-62. doi: 10.1073/pnas.1017511108. Epub 2011 Mar 7.

18.

A major Y-chromosome haplogroup R1b Holocene era founder effect in Central and Western Europe.

Myres NM, Rootsi S, Lin AA, Järve M, King RJ, Kutuev I, Cabrera VM, Khusnutdinova EK, Pshenichnov A, Yunusbayev B, Balanovsky O, Balanovska E, Rudan P, Baldovic M, Herrera RJ, Chiaroni J, Di Cristofaro J, Villems R, Kivisild T, Underhill PA.

Eur J Hum Genet. 2011 Jan;19(1):95-101. doi: 10.1038/ejhg.2010.146. Epub 2010 Aug 25.

19.

Androgens suppress antigen-specific T cell responses and IFN-γ production during intracranial LCMV infection.

Lin AA, Wojciechowski SE, Hildeman DA.

J Neuroimmunol. 2010 Sep 14;226(1-2):8-19. doi: 10.1016/j.jneuroim.2010.05.026.

20.

Effect of temperature, pH, dissolved oxygen, and hydrolysate on the formation of triple light chain antibodies in cell culture.

Gomez N, Ouyang J, Nguyen MD, Vinson AR, Lin AA, Yuk IH.

Biotechnol Prog. 2010 Sep-Oct;26(5):1438-45. doi: 10.1002/btpr.465.

PMID:
20568280
21.

Separating the post-Glacial coancestry of European and Asian Y chromosomes within haplogroup R1a.

Underhill PA, Myres NM, Rootsi S, Metspalu M, Zhivotovsky LA, King RJ, Lin AA, Chow CE, Semino O, Battaglia V, Kutuev I, Järve M, Chaubey G, Ayub Q, Mohyuddin A, Mehdi SQ, Sengupta S, Rogaev EI, Khusnutdinova EK, Pshenichnov A, Balanovsky O, Balanovska E, Jeran N, Augustin DH, Baldovic M, Herrera RJ, Thangaraj K, Singh V, Singh L, Majumder P, Rudan P, Primorac D, Villems R, Kivisild T.

Eur J Hum Genet. 2010 Apr;18(4):479-84. doi: 10.1038/ejhg.2009.194. Epub 2009 Nov 4. Erratum in: Eur J Hum Genet. 2010 Sep;18(9):1074.

22.

Update on pediatric cataract surgery and intraocular lens implantation.

Lin AA, Buckley EG.

Curr Opin Ophthalmol. 2010 Jan;21(1):55-9. doi: 10.1097/ICU.0b013e32833383cb. Review.

PMID:
19855277
23.

The emergence of Y-chromosome haplogroup J1e among Arabic-speaking populations.

Chiaroni J, King RJ, Myres NM, Henn BM, Ducourneau A, Mitchell MJ, Boetsch G, Sheikha I, Lin AA, Nik-Ahd M, Ahmad J, Lattanzi F, Herrera RJ, Ibrahim ME, Brody A, Semino O, Kivisild T, Underhill PA.

Eur J Hum Genet. 2010 Mar;18(3):348-53. doi: 10.1038/ejhg.2009.166. Epub 2009 Oct 14.

24.

Gamma interferon signaling in macrophage lineage cells regulates central nervous system inflammation and chemokine production.

Lin AA, Tripathi PK, Sholl A, Jordan MB, Hildeman DA.

J Virol. 2009 Sep;83(17):8604-15. doi: 10.1128/JVI.02477-08. Epub 2009 Jun 10.

25.
27.

Time-dependent block of ultrarapid-delayed rectifier K+ currents by aconitine, a potent cardiotoxin, in heart-derived H9c2 myoblasts and in neonatal rat ventricular myocytes.

Wang YJ, Chen BS, Lin MW, Lin AA, Peng H, Sung RJ, Wu SN.

Toxicol Sci. 2008 Dec;106(2):454-63. doi: 10.1093/toxsci/kfn189. Epub 2008 Sep 8.

PMID:
18779382
28.

Y-chromosomal evidence of a pastoralist migration through Tanzania to southern Africa.

Henn BM, Gignoux C, Lin AA, Oefner PJ, Shen P, Scozzari R, Cruciani F, Tishkoff SA, Mountain JL, Underhill PA.

Proc Natl Acad Sci U S A. 2008 Aug 5;105(31):10693-8. doi: 10.1073/pnas.0801184105. Epub 2008 Aug 4.

29.

Characterization of aconitine-induced block of delayed rectifier K+ current in differentiated NG108-15 neuronal cells.

Lin MW, Wang YJ, Liu SI, Lin AA, Lo YC, Wu SN.

Neuropharmacology. 2008 May;54(6):912-23. doi: 10.1016/j.neuropharm.2008.01.009. Epub 2008 Feb 6.

PMID:
18336846
30.

Differential Y-chromosome Anatolian influences on the Greek and Cretan Neolithic.

King RJ, Ozcan SS, Carter T, Kalfoğlu E, Atasoy S, Triantaphyllidis C, Kouvatsi A, Lin AA, Chow CE, Zhivotovsky LA, Michalodimitrakis M, Underhill PA.

Ann Hum Genet. 2008 Mar;72(Pt 2):205-14. doi: 10.1111/j.1469-1809.2007.00414.x.

31.
32.

Y-chromosome short tandem repeat DYS458.2 non-consensus alleles occur independently in both binary haplogroups J1-M267 and R1b3-M405.

Myres NM, Ekins JE, Lin AA, Cavalli-Sforza LL, Woodward SR, Underhill PA.

Croat Med J. 2007 Aug;48(4):450-9.

33.

Rapid evolution, genetic variations, and functional association of the human spermatogenesis-related gene NYD-SP12.

Zhang Q, Zhang F, Chen XH, Wang YQ, Wang WQ, Lin AA, Cavalli-Sforza LL, Jin L, Huo R, Sha JH, Li Z, Su B.

J Mol Evol. 2007 Aug;65(2):154-61. Epub 2007 Jul 30.

PMID:
17665087
34.

Revealing the prehistoric settlement of Australia by Y chromosome and mtDNA analysis.

Hudjashov G, Kivisild T, Underhill PA, Endicott P, Sanchez JJ, Lin AA, Shen P, Oefner P, Renfrew C, Villems R, Forster P.

Proc Natl Acad Sci U S A. 2007 May 22;104(21):8726-30. Epub 2007 May 11.

35.

A counter-clockwise northern route of the Y-chromosome haplogroup N from Southeast Asia towards Europe.

Rootsi S, Zhivotovsky LA, Baldovic M, Kayser M, Kutuev IA, Khusainova R, Bermisheva MA, Gubina M, Fedorova SA, Ilumäe AM, Khusnutdinova EK, Voevoda MI, Osipova LP, Stoneking M, Lin AA, Ferak V, Parik J, Kivisild T, Underhill PA, Villems R.

Eur J Hum Genet. 2007 Feb;15(2):204-11. Epub 2006 Dec 6.

36.

Melanesian and Asian origins of Polynesians: mtDNA and Y chromosome gradients across the Pacific.

Kayser M, Brauer S, Cordaux R, Casto A, Lao O, Zhivotovsky LA, Moyse-Faurie C, Rutledge RB, Schiefenhoevel W, Gil D, Lin AA, Underhill PA, Oefner PJ, Trent RJ, Stoneking M.

Mol Biol Evol. 2006 Nov;23(11):2234-44. Epub 2006 Aug 21.

PMID:
16923821
37.

Polarity and temporality of high-resolution y-chromosome distributions in India identify both indigenous and exogenous expansions and reveal minor genetic influence of Central Asian pastoralists.

Sengupta S, Zhivotovsky LA, King R, Mehdi SQ, Edmonds CA, Chow CE, Lin AA, Mitra M, Sil SK, Ramesh A, Usha Rani MV, Thakur CM, Cavalli-Sforza LL, Majumder PP, Underhill PA.

Am J Hum Genet. 2006 Feb;78(2):202-21. Epub 2005 Dec 16.

38.

Molecular evolution of CXCR1, a G protein-coupled receptor involved in signal transduction of neutrophils.

Liu Y, Yang S, Lin AA, Cavalli-Sforza LL, Su B.

J Mol Evol. 2005 Nov;61(5):691-6. Epub 2005 Oct 4.

PMID:
16205979
39.

Adaptive evolution of MRGX2, a human sensory neuron specific gene involved in nociception.

Yang S, Liu Y, Lin AA, Cavalli-Sforza LL, Zhao Z, Su B.

Gene. 2005 Jun 6;352:30-5. Epub 2005 Apr 26.

PMID:
15862286
40.

Accelerated evolution of the pituitary adenylate cyclase-activating polypeptide precursor gene during human origin.

Wang YQ, Qian YP, Yang S, Shi H, Liao CH, Zheng HK, Wang J, Lin AA, Cavalli-Sforza LL, Underhill PA, Chakraborty R, Jin L, Su B.

Genetics. 2005 Jun;170(2):801-6. Epub 2005 Apr 16.

41.

Origin, diffusion, and differentiation of Y-chromosome haplogroups E and J: inferences on the neolithization of Europe and later migratory events in the Mediterranean area.

Semino O, Magri C, Benuzzi G, Lin AA, Al-Zahery N, Battaglia V, Maccioni L, Triantaphyllidis C, Shen P, Oefner PJ, Zhivotovsky LA, King R, Torroni A, Cavalli-Sforza LL, Underhill PA, Santachiara-Benerecetti AS.

Am J Hum Genet. 2004 May;74(5):1023-34. Epub 2004 Apr 6.

42.

Excavating Y-chromosome haplotype strata in Anatolia.

Cinnioğlu C, King R, Kivisild T, Kalfoğlu E, Atasoy S, Cavalleri GL, Lillie AS, Roseman CC, Lin AA, Prince K, Oefner PJ, Shen P, Semino O, Cavalli-Sforza LL, Underhill PA.

Hum Genet. 2004 Jan;114(2):127-48. Epub 2003 Oct 29.

PMID:
14586639
43.

Peopling of three Mediterranean islands (Corsica, Sardinia, and Sicily) inferred by Y-chromosome biallelic variability.

Francalacci P, Morelli L, Underhill PA, Lillie AS, Passarino G, Useli A, Madeddu R, Paoli G, Tofanelli S, Calò CM, Ghiani ME, Varesi L, Memmi M, Vona G, Lin AA, Oefner P, Cavalli-Sforza LL.

Am J Phys Anthropol. 2003 Jul;121(3):270-9.

PMID:
12772214
44.

African Y chromosome and mtDNA divergence provides insight into the history of click languages.

Knight A, Underhill PA, Mortensen HM, Zhivotovsky LA, Lin AA, Henn BM, Louis D, Ruhlen M, Mountain JL.

Curr Biol. 2003 Mar 18;13(6):464-73. Erratum in: Curr Biol. 2003 Apr 15;13(8):705.

45.

SNPSTRs: empirically derived, rapidly typed, autosomal haplotypes for inference of population history and mutational processes.

Mountain JL, Knight A, Jobin M, Gignoux C, Miller A, Lin AA, Underhill PA.

Genome Res. 2002 Nov;12(11):1766-72.

46.

Different genetic components in the Norwegian population revealed by the analysis of mtDNA and Y chromosome polymorphisms.

Passarino G, Cavalleri GL, Lin AA, Cavalli-Sforza LL, Børresen-Dale AL, Underhill PA.

Eur J Hum Genet. 2002 Sep;10(9):521-9.

47.

A human genome diversity cell line panel.

Cann HM, de Toma C, Cazes L, Legrand MF, Morel V, Piouffre L, Bodmer J, Bodmer WF, Bonne-Tamir B, Cambon-Thomsen A, Chen Z, Chu J, Carcassi C, Contu L, Du R, Excoffier L, Ferrara GB, Friedlaender JS, Groot H, Gurwitz D, Jenkins T, Herrera RJ, Huang X, Kidd J, Kidd KK, Langaney A, Lin AA, Mehdi SQ, Parham P, Piazza A, Pistillo MP, Qian Y, Shu Q, Xu J, Zhu S, Weber JL, Greely HT, Feldman MW, Thomas G, Dausset J, Cavalli-Sforza LL.

Science. 2002 Apr 12;296(5566):261-2. No abstract available.

PMID:
11954565
48.

Origins and divergence of the Roma (gypsies).

Gresham D, Morar B, Underhill PA, Passarino G, Lin AA, Wise C, Angelicheva D, Calafell F, Oefner PJ, Shen P, Tournev I, de Pablo R, Kuĉinskas V, Perez-Lezaun A, Marushiakova E, Popov V, Kalaydjieva L.

Am J Hum Genet. 2001 Dec;69(6):1314-31. Epub 2001 Nov 9.

49.

The phylogeography of Y chromosome binary haplotypes and the origins of modern human populations.

Underhill PA, Passarino G, Lin AA, Shen P, Mirazón Lahr M, Foley RA, Oefner PJ, Cavalli-Sforza LL.

Ann Hum Genet. 2001 Jan;65(Pt 1):43-62.

PMID:
11415522
50.

Maori origins, Y-chromosome haplotypes and implications for human history in the Pacific.

Underhill PA, Passarino G, Lin AA, Marzuki S, Oefner PJ, Cavalli-Sforza LL, Chambers GK.

Hum Mutat. 2001 Apr;17(4):271-80.

PMID:
11295824

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