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Items: 35

1.

Selection and assembly of indigenous bacteria and methanogens from spent metalworking fluids and their potential as a starting culture in a fluidized bed reactor.

Vyrides I, Rivett DW, Bruce KD, Lilley AK.

Microb Biotechnol. 2019 Jul 21. doi: 10.1111/1751-7915.13448. [Epub ahead of print]

2.

Contributions of Composition and Interactions to Bacterial Respiration Are Reliant on the Phylogenetic Similarity of the Measured Community.

Rivett DW, Lilley AK, Connett GJ, Carroll MP, Legg JP, Bruce KD.

Microb Ecol. 2017 Oct;74(3):757-760. doi: 10.1007/s00248-017-0982-2. Epub 2017 Apr 27.

3.

Environmentally co-occurring mercury resistance plasmids are genetically and phenotypically diverse and confer variable context-dependent fitness effects.

Hall JP, Harrison E, Lilley AK, Paterson S, Spiers AJ, Brockhurst MA.

Environ Microbiol. 2015 Dec;17(12):5008-22. doi: 10.1111/1462-2920.12901. Epub 2015 Jun 25.

4.

Reducing bias in bacterial community analysis of lower respiratory infections.

Rogers GB, Cuthbertson L, Hoffman LR, Wing PA, Pope C, Hooftman DA, Lilley AK, Oliver A, Carroll MP, Bruce KD, van der Gast CJ.

ISME J. 2013 Apr;7(4):697-706. doi: 10.1038/ismej.2012.145. Epub 2012 Nov 29.

5.

Does bacterial density in cystic fibrosis sputum increase prior to pulmonary exacerbation?

Stressmann FA, Rogers GB, Marsh P, Lilley AK, Daniels TW, Carroll MP, Hoffman LR, Jones G, Allen CE, Patel N, Forbes B, Tuck A, Bruce KD.

J Cyst Fibros. 2011 Sep;10(5):357-65. doi: 10.1016/j.jcf.2011.05.002. Epub 2011 Jun 12.

6.

Analysis of the bacterial communities present in lungs of patients with cystic fibrosis from American and British centers.

Stressmann FA, Rogers GB, Klem ER, Lilley AK, Donaldson SH, Daniels TW, Carroll MP, Patel N, Forbes B, Boucher RC, Wolfgang MC, Bruce KD.

J Clin Microbiol. 2011 Jan;49(1):281-91. doi: 10.1128/JCM.01650-10. Epub 2010 Nov 10.

7.

Determining the effects of a spatially heterogeneous selection pressure on bacterial population structure at the sub-millimetre scale.

Slater FR, Bruce KD, Ellis RJ, Lilley AK, Turner SL.

Microb Ecol. 2010 Nov;60(4):873-84. doi: 10.1007/s00248-010-9687-5. Epub 2010 May 29.

PMID:
20512486
8.

Modelling the bacterial communities associated with cystic fibrosis lung infections.

Spasenovski T, Carroll MP, Lilley AK, Payne MS, Bruce KD.

Eur J Clin Microbiol Infect Dis. 2010 Mar;29(3):319-28. doi: 10.1007/s10096-009-0861-y. Epub 2010 Jan 23.

PMID:
20099020
9.

Anthropogenic disturbance affects the structure of bacterial communities.

Ager D, Evans S, Li H, Lilley AK, van der Gast CJ.

Environ Microbiol. 2010 Mar;12(3):670-8. doi: 10.1111/j.1462-2920.2009.02107.x. Epub 2009 Nov 25.

PMID:
20002134
10.

A linear model method for biodiversity-ecosystem functioning experiments.

Bell T, Lilley AK, Hector A, Schmid B, King L, Newman JA.

Am Nat. 2009 Dec;174(6):836-49. doi: 10.1086/647931.

PMID:
19842969
11.

Bacterial community diversity in cultures derived from healthy and inflamed ileal pouches after restorative proctocolectomy.

Johnson MW, Rogers GB, Bruce KD, Lilley AK, von Herbay A, Forbes A, Ciclitira PJ, Nicholls RJ.

Inflamm Bowel Dis. 2009 Dec;15(12):1803-11. doi: 10.1002/ibd.21022. Epub 2009 Jul 27.

PMID:
19637361
12.

Heterogeneous selection in a spatially structured environment affects fitness tradeoffs of plasmid carriage in pseudomonads.

Slater FR, Bruce KD, Ellis RJ, Lilley AK, Turner SL.

Appl Environ Microbiol. 2008 May;74(10):3189-97. doi: 10.1128/AEM.02383-07. Epub 2008 Mar 31.

13.

Temporal scaling of bacterial taxa is influenced by both stochastic and deterministic ecological factors.

van der Gast CJ, Ager D, Lilley AK.

Environ Microbiol. 2008 Jun;10(6):1411-8. doi: 10.1111/j.1462-2920.2007.01550.x. Epub 2008 Jan 16.

PMID:
18205822
14.

Frequency-dependent advantages of plasmid carriage by Pseudomonas in homogeneous and spatially structured environments.

Ellis RJ, Lilley AK, Lacey SJ, Murrell D, Godfray HC.

ISME J. 2007 May;1(1):92-5.

PMID:
18043617
15.
16.

The indigenous Pseudomonas plasmid pQBR103 encodes plant-inducible genes, including three putative helicases.

Zhang XX, Lilley AK, Bailey MJ, Rainey PB.

FEMS Microbiol Ecol. 2004 Dec 27;51(1):9-17.

17.

Life in earth: the impact of GM plants on soil ecology?

Lilley AK, Bailey MJ, Cartwright C, Turner SL, Hirsch PR.

Trends Biotechnol. 2006 Jan;24(1):9-14. Epub 2005 Nov 22.

PMID:
16309767
18.

The contribution of species richness and composition to bacterial services.

Bell T, Newman JA, Silverman BW, Turner SL, Lilley AK.

Nature. 2005 Aug 25;436(7054):1157-60.

PMID:
16121181
19.

Island size and bacterial diversity in an archipelago of engineering machines.

van der Gast CJ, Lilley AK, Ager D, Thompson IP.

Environ Microbiol. 2005 Aug;7(8):1220-6.

PMID:
16011759
20.

Larger islands house more bacterial taxa.

Bell T, Ager D, Song JI, Newman JA, Thompson IP, Lilley AK, van der Gast CJ.

Science. 2005 Jun 24;308(5730):1884.

21.

Calibration and deployment of custom-designed bioreporters for protecting biological remediation consortia from toxic shock.

Wiles S, Lilley AK, Philp JC, Bailey MJ, Whiteley AS.

Environ Microbiol. 2005 Feb;7(2):260-9.

PMID:
15658993
22.

Transferable antibiotic resistance elements in Haemophilus influenzae share a common evolutionary origin with a diverse family of syntenic genomic islands.

Mohd-Zain Z, Turner SL, Cerdeño-Tárraga AM, Lilley AK, Inzana TJ, Duncan AJ, Harding RM, Hood DW, Peto TE, Crook DW.

J Bacteriol. 2004 Dec;186(23):8114-22.

23.

Functional and phylogenetic analysis of a plant-inducible oligoribonuclease (orn) gene from an indigenous Pseudomonas plasmid.

Zhang XX, Lilley AK, Bailey MJ, Rainey PB.

Microbiology. 2004 Sep;150(Pt 9):2889-98.

PMID:
15347748
24.

Population dynamics and gene transfer in genetically modified bacteria in a model microcosm.

Lilley AK, Bailey MJ, Barr M, Kilshaw K, Timms-Wilson TM, Day MJ, Norris SJ, Jones TH, Godfray HC.

Mol Ecol. 2003 Nov;12(11):3097-107.

PMID:
14629389
25.

Bacterial community structure and function in a metal-working fluid.

van der Gast CJ, Whiteley AS, Lilley AK, Knowles CJ, Thompson IP.

Environ Microbiol. 2003 Jun;5(6):453-61.

PMID:
12755712
26.

The transfer dynamics of Pseudomonas sp. plasmid pQBR11 in biofilms.

Lilley AK, Bailey MJ.

FEMS Microbiol Ecol. 2002 Nov 1;42(2):243-50. doi: 10.1111/j.1574-6941.2002.tb01014.x.

27.

Two dnaB genes are associated with the origin of replication of pQBR55, an exogenously isolated plasmid from the rhizosphere of sugar beet.

Turner SL, Lilley AK, Bailey MJ.

FEMS Microbiol Ecol. 2002 Nov 1;42(2):209-15. doi: 10.1111/j.1574-6941.2002.tb01010.x.

28.

Ecological and molecular maintenance strategies of mobile genetic elements.

Turner SL, Bailey MJ, Lilley AK, Thomas CM.

FEMS Microbiol Ecol. 2002 Nov 1;42(2):177-85. doi: 10.1111/j.1574-6941.2002.tb01007.x.

29.

Characterisation of the culturable heterotrophic bacterial community in a small eutrophic lake (Priest Pot).

Edwards ML, Lilley AK, Timms-Wilson TH, Thompson IP, Cooper I.

FEMS Microbiol Ecol. 2001 May;35(3):295-304.

30.

Ecological and physiological analyses of Pseudomonad species within a phenol remediation system.

Whiteley AS, Wiles S, Lilley AK, Philp J, Bailey MJ.

J Microbiol Methods. 2001 Feb 1;44(1):79-88.

PMID:
11166102
31.

In situ population dynamics of bacterial viruses in a terrestrial environment

Ashelford KE, Day MJ, Bailey MJ, Lilley AK, Fry JC.

Appl Environ Microbiol. 1999 Jan;65(1):169-74.

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