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Items: 28

1.

Phobos LIFE (Living Interplanetary Flight Experiment).

Betts BH, Warmflash D, Fraze RE, Friedman L, Vorobyova E, Lilburn TG, Smith A, Rettberg P, J├Ânsson KI, Ciftcioglu N, Fox GE, Svitek T, Kirschvinck JL, Moeller R, Wassmann M, Berger T.

Astrobiology. 2019 Sep;19(9):1177-1185. doi: 10.1089/ast.2018.1904. Epub 2019 Aug 9.

PMID:
31397580
2.

Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III: the genomes of soil and plant-associated and newly described type strains.

Whitman WB, Woyke T, Klenk HP, Zhou Y, Lilburn TG, Beck BJ, De Vos P, Vandamme P, Eisen JA, Garrity G, Hugenholtz P, Kyrpides NC.

Stand Genomic Sci. 2015 May 17;10:26. doi: 10.1186/s40793-015-0017-x. eCollection 2015.

3.

Predicting and exploring network components involved in pathogenesis in the malaria parasite via novel subnetwork alignments.

Cai H, Lilburn TG, Hong C, Gu J, Kuang R, Wang Y.

BMC Syst Biol. 2015;9 Suppl 4:S1. doi: 10.1186/1752-0509-9-S4-S1. Epub 2015 Jun 11.

4.

Heavy path mining of protein-protein associations in the malaria parasite.

Yu X, Korkmaz T, Lilburn TG, Cai H, Gu J, Wang Y.

Methods. 2015 Jul 15;83:63-70. doi: 10.1016/j.ymeth.2015.04.002. Epub 2015 Apr 7.

5.

Exploring systems affected by the heat shock response in Plasmodium falciparum via protein association networks.

Lilburn TG, Cai H, Gu J, Zhou Z, Wang Y.

Int J Comput Biol Drug Des. 2014;7(4):369-83. doi: 10.1504/IJCBDD.2014.066554. Epub 2014 Dec 25.

6.

Genomic Encyclopedia of Type Strains, Phase I: The one thousand microbial genomes (KMG-I) project.

Kyrpides NC, Woyke T, Eisen JA, Garrity G, Lilburn TG, Beck BJ, Whitman WB, Hugenholtz P, Klenk HP.

Stand Genomic Sci. 2013 Dec 17;9(3):1278-84. doi: 10.4056/sigs.5068949. eCollection 2014 Jun 15.

7.

A novel subnetwork alignment approach predicts new components of the cell cycle regulatory apparatus in Plasmodium falciparum.

Cai H, Hong C, Lilburn TG, Rodriguez AL, Chen S, Gu J, Kuang R, Wang Y.

BMC Bioinformatics. 2013;14 Suppl 12:S2. doi: 10.1186/1471-2105-14-S12-S2. Epub 2013 Sep 24.

8.

Module-based subnetwork alignments reveal novel transcriptional regulators in malaria parasite Plasmodium falciparum.

Cai H, Hong C, Gu J, Lilburn TG, Kuang R, Wang Y.

BMC Syst Biol. 2012;6 Suppl 3:S5. doi: 10.1186/1752-0509-6-S3-S5. Epub 2012 Dec 17.

9.

Protease-associated cellular networks in malaria parasite Plasmodium falciparum.

Lilburn TG, Cai H, Zhou Z, Wang Y.

BMC Genomics. 2011 Dec 23;12 Suppl 5:S9. doi: 10.1186/1471-2164-12-S5-S9. Epub 2011 Dec 23.

10.

Comparative genomics of the family Vibrionaceae reveals the wide distribution of genes encoding virulence-associated proteins.

Lilburn TG, Gu J, Cai H, Wang Y.

BMC Genomics. 2010 Jun 10;11:369. doi: 10.1186/1471-2164-11-369.

11.

Biological Resource Centers and Systems Biology.

Wang Y, Lilburn TG.

Bioscience. 2009 Feb 11;59(2):113-125.

12.

Genomic and systems evolution in Vibrionaceae species.

Gu J, Neary J, Cai H, Moshfeghian A, Rodriguez SA, Lilburn TG, Wang Y.

BMC Genomics. 2009 Jul 7;10 Suppl 1:S11. doi: 10.1186/1471-2164-10-S1-S11.

13.

A novel lineage of proteobacteria involved in formation of marine Fe-oxidizing microbial mat communities.

Emerson D, Rentz JA, Lilburn TG, Davis RE, Aldrich H, Chan C, Moyer CL.

PLoS One. 2007 Aug 1;2(7):e667.

14.

Genome evolution and functional divergence in Yersinia.

Gu J, Neary JL, Sanchez M, Yu J, Lilburn TG, Wang Y.

J Exp Zool B Mol Dev Evol. 2007 Jan 15;308(1):37-49.

PMID:
16838303
15.

Computational aspects of systematic biology.

Lilburn TG, Harrison SH, Cole JR, Garrity GM.

Brief Bioinform. 2006 Jun;7(2):186-95. Epub 2006 Apr 24. Review.

PMID:
16772262
16.

Self-organizing and self-correcting classifications of biological data.

Garrity GM, Lilburn TG.

Bioinformatics. 2005 May 15;21(10):2309-14. Epub 2005 Feb 24.

PMID:
15731209
17.

Exploring prokaryotic taxonomy.

Lilburn TG, Garrity GM.

Int J Syst Evol Microbiol. 2004 Jan;54(Pt 1):7-13.

PMID:
14742453
18.

Nitrogen fixation by symbiotic and free-living spirochetes.

Lilburn TG, Kim KS, Ostrom NE, Byzek KR, Leadbetter JR, Breznak JA.

Science. 2001 Jun 29;292(5526):2495-8.

19.

Phylogenetic diversity of termite gut spirochaetes.

Lilburn TG, Schmidt TM, Breznak JA.

Environ Microbiol. 1999 Aug;1(4):331-45.

PMID:
11207751
20.

The RDP-II (Ribosomal Database Project).

Maidak BL, Cole JR, Lilburn TG, Parker CT Jr, Saxman PR, Farris RJ, Garrity GM, Olsen GJ, Schmidt TM, Tiedje JM.

Nucleic Acids Res. 2001 Jan 1;29(1):173-4.

21.

The RDP (Ribosomal Database Project) continues.

Maidak BL, Cole JR, Lilburn TG, Parker CT Jr, Saxman PR, Stredwick JM, Garrity GM, Li B, Olsen GJ, Pramanik S, Schmidt TM, Tiedje JM.

Nucleic Acids Res. 2000 Jan 1;28(1):173-4.

22.

A new version of the RDP (Ribosomal Database Project).

Maidak BL, Cole JR, Parker CT Jr, Garrity GM, Larsen N, Li B, Lilburn TG, McCaughey MJ, Olsen GJ, Overbeek R, Pramanik S, Schmidt TM, Tiedje JM, Woese CR.

Nucleic Acids Res. 1999 Jan 1;27(1):171-3.

23.

Isolation of the PufX protein from Rhodobacter capsulatus and Rhodobacter sphaeroides: evidence for its interaction with the alpha-polypeptide of the core light-harvesting complex.

Recchia PA, Davis CM, Lilburn TG, Beatty JT, Parkes-Loach PS, Hunter CN, Loach PA.

Biochemistry. 1998 Aug 4;37(31):11055-63.

PMID:
9693001
24.

arfI and arfII, two genes encoding alpha-L-arabinofuranosidases in Cytophaga xylanolytica.

Kim KS, Lilburn TG, Renner MJ, Breznak JA.

Appl Environ Microbiol. 1998 May;64(5):1919-23.

27.

Pleiotropic effects of pufX gene deletion on the structure and function of the photosynthetic apparatus of Rhodobacter capsulatus.

Lilburn TG, Haith CE, Prince RC, Beatty JT.

Biochim Biophys Acta. 1992 May 20;1100(2):160-70.

PMID:
1319207
28.

Formation of functional inter-species hybrid photosynthetic complexes in Rhodobacter capsulatus.

Zilsel J, Lilburn TG, Beatty JT.

FEBS Lett. 1989 Aug 14;253(1-2):247-52.

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