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Items: 41

1.

Genome-wide association study of paliperidone efficacy.

Li Q, Wineinger NE, Fu DJ, Libiger O, Alphs L, Savitz A, Gopal S, Cohen N, Schork NJ.

Pharmacogenet Genomics. 2017 Jan;27(1):7-18.

2.

A statistical method for the detection of variants from next-generation resequencing of DNA pools.

Bansal V, Bansal V, Libiger O.

Bioinformatics. 2016 Oct 15;32(20):3213. Epub 2016 Aug 29. No abstract available.

3.

Toward clinical genomics in everyday medicine: perspectives and recommendations.

Delaney SK, Hultner ML, Jacob HJ, Ledbetter DH, McCarthy JJ, Ball M, Beckman KB, Belmont JW, Bloss CS, Christman MF, Cosgrove A, Damiani SA, Danis T, Delledonne M, Dougherty MJ, Dudley JT, Faucett WA, Friedman JR, Haase DH, Hays TS, Heilsberg S, Huber J, Kaminsky L, Ledbetter N, Lee WH, Levin E, Libiger O, Linderman M, Love RL, Magnus DC, Martland A, McClure SL, Megill SE, Messier H, Nussbaum RL, Palaniappan L, Patay BA, Popovich BW, Quackenbush J, Savant MJ, Su MM, Terry SF, Tucker S, Wong WT, Green RC.

Expert Rev Mol Diagn. 2016;16(5):521-32. doi: 10.1586/14737159.2016.1146593. Epub 2016 Feb 24.

4.

Partial Least Squares Regression Can Aid in Detecting Differential Abundance of Multiple Features in Sets of Metagenomic Samples.

Libiger O, Schork NJ.

Front Genet. 2015 Dec 17;6:350. doi: 10.3389/fgene.2015.00350. eCollection 2015.

5.

Anxiety is related to indices of cortical maturation in typically developing children and adolescents.

Newman E, Thompson WK, Bartsch H, Hagler DJ Jr, Chen CH, Brown TT, Kuperman JM, McCabe C, Chung Y, Libiger O, Akshoomoff N, Bloss CS, Casey BJ, Chang L, Ernst TM, Frazier JA, Gruen JR, Kennedy DN, Murray SS, Sowell ER, Schork N, Kenet T, Kaufmann WE, Mostofsky S, Amaral DG, Dale AM, Jernigan TL.

Brain Struct Funct. 2016 Jul;221(6):3013-25. doi: 10.1007/s00429-015-1085-9. Epub 2015 Jul 17.

6.

Dyslexia and language impairment associated genetic markers influence cortical thickness and white matter in typically developing children.

Eicher JD, Montgomery AM, Akshoomoff N, Amaral DG, Bloss CS, Libiger O, Schork NJ, Darst BF, Casey BJ, Chang L, Ernst T, Frazier J, Kaufmann WE, Keating B, Kenet T, Kennedy D, Mostofsky S, Murray SS, Sowell ER, Bartsch H, Kuperman JM, Brown TT, Hagler DJ Jr, Dale AM, Jernigan TL, Gruen JR; Pediatric Imaging Neurocognition Genetics Study.

Brain Imaging Behav. 2016 Mar;10(1):272-82. doi: 10.1007/s11682-015-9392-6.

7.

The Pediatric Imaging, Neurocognition, and Genetics (PING) Data Repository.

Jernigan TL, Brown TT, Hagler DJ Jr, Akshoomoff N, Bartsch H, Newman E, Thompson WK, Bloss CS, Murray SS, Schork N, Kennedy DN, Kuperman JM, McCabe C, Chung Y, Libiger O, Maddox M, Casey BJ, Chang L, Ernst TM, Frazier JA, Gruen JR, Sowell ER, Kenet T, Kaufmann WE, Mostofsky S, Amaral DG, Dale AM; Pediatric Imaging, Neurocognition and Genetics Study.

Neuroimage. 2016 Jan 1;124(Pt B):1149-1154. doi: 10.1016/j.neuroimage.2015.04.057. Epub 2015 May 1.

8.

Family income, parental education and brain structure in children and adolescents.

Noble KG, Houston SM, Brito NH, Bartsch H, Kan E, Kuperman JM, Akshoomoff N, Amaral DG, Bloss CS, Libiger O, Schork NJ, Murray SS, Casey BJ, Chang L, Ernst TM, Frazier JA, Gruen JR, Kennedy DN, Van Zijl P, Mostofsky S, Kaufmann WE, Kenet T, Dale AM, Jernigan TL, Sowell ER.

Nat Neurosci. 2015 May;18(5):773-8. doi: 10.1038/nn.3983. Epub 2015 Mar 30.

9.

Fast individual ancestry inference from DNA sequence data leveraging allele frequencies for multiple populations.

Bansal V, Libiger O.

BMC Bioinformatics. 2015 Jan 16;16:4. doi: 10.1186/s12859-014-0418-7.

10.

Association and ancestry analysis of sequence variants in ADH and ALDH using alcohol-related phenotypes in a Native American community sample.

Peng Q, Gizer IR, Libiger O, Bizon C, Wilhelmsen KC, Schork NJ, Ehlers CL.

Am J Med Genet B Neuropsychiatr Genet. 2014 Dec;165B(8):673-83. doi: 10.1002/ajmg.b.32272. Epub 2014 Sep 30.

11.

Admixture and clinical phenotypic variation.

Goetz LH, Uribe-Bruce L, Quarless D, Libiger O, Schork NJ.

Hum Hered. 2014;77(1-4):73-86. doi: 10.1159/000362233. Epub 2014 Jul 29. Review.

12.

Correlation analysis of genetic admixture and social identification with body mass index in a Native American community.

Norden-Krichmar TM, Gizer IR, Libiger O, Wilhelmsen KC, Ehlers CL, Schork NJ.

Am J Hum Biol. 2014 May-Jun;26(3):347-60. doi: 10.1002/ajhb.22521. Epub 2014 Feb 17.

13.

Chip-based direct genotyping of coding variants in genome wide association studies: utility, issues and prospects.

Nievergelt CM, Wineinger NE, Libiger O, Pham P, Zhang G, Baker DG; Marine Resiliency Study Investigators, Schork NJ.

Gene. 2014 Apr 25;540(1):104-9. doi: 10.1016/j.gene.2014.01.069. Epub 2014 Feb 9.

14.

The NIH Toolbox Cognition Battery: results from a large normative developmental sample (PING).

Akshoomoff N, Newman E, Thompson WK, McCabe C, Bloss CS, Chang L, Amaral DG, Casey BJ, Ernst TM, Frazier JA, Gruen JR, Kaufmann WE, Kenet T, Kennedy DN, Libiger O, Mostofsky S, Murray SS, Sowell ER, Schork N, Dale AM, Jernigan TL.

Neuropsychology. 2014 Jan;28(1):1-10. doi: 10.1037/neu0000001. Epub 2013 Nov 11. Erratum in: Neuropsychology. 2014 Mar;28(2):319.

15.

Genome-wide association study of shared components of reading disability and language impairment.

Eicher JD, Powers NR, Miller LL, Akshoomoff N, Amaral DG, Bloss CS, Libiger O, Schork NJ, Darst BF, Casey BJ, Chang L, Ernst T, Frazier J, Kaufmann WE, Keating B, Kenet T, Kennedy D, Mostofsky S, Murray SS, Sowell ER, Bartsch H, Kuperman JM, Brown TT, Hagler DJ Jr, Dale AM, Jernigan TL, St Pourcain B, Davey Smith G, Ring SM, Gruen JR; Pediatric Imaging, Neurocognition, and Genetics Study.

Genes Brain Behav. 2013 Nov;12(8):792-801. doi: 10.1111/gbb.12085. Epub 2013 Oct 9.

16.

Evidence for the role of EPHX2 gene variants in anorexia nervosa.

Scott-Van Zeeland AA, Bloss CS, Tewhey R, Bansal V, Torkamani A, Libiger O, Duvvuri V, Wineinger N, Galvez L, Darst BF, Smith EN, Carson A, Pham P, Phillips T, Villarasa N, Tisch R, Zhang G, Levy S, Murray S, Chen W, Srinivasan S, Berenson G, Brandt H, Crawford S, Crow S, Fichter MM, Halmi KA, Johnson C, Kaplan AS, La Via M, Mitchell JE, Strober M, Rotondo A, Treasure J, Woodside DB, Bulik CM, Keel P, Klump KL, Lilenfeld L, Plotnicov K, Topol EJ, Shih PB, Magistretti P, Bergen AW, Berrettini W, Kaye W, Schork NJ.

Mol Psychiatry. 2014 Jun;19(6):724-32. doi: 10.1038/mp.2013.91. Epub 2013 Sep 3.

17.

Inference of human continental origin and admixture proportions using a highly discriminative ancestry informative 41-SNP panel.

Nievergelt CM, Maihofer AX, Shekhtman T, Libiger O, Wang X, Kidd KK, Kidd JR.

Investig Genet. 2013 Jul 1;4(1):13. doi: 10.1186/2041-2223-4-13.

18.

Genomic risk models improve prediction of longitudinal lipid levels in children and young adults.

Wineinger NE, Harper A, Libiger O, Srinivasan SR, Chen W, Berenson GS, Schork NJ.

Front Genet. 2013 May 21;4:86. doi: 10.3389/fgene.2013.00086. eCollection 2013.

19.

Complex patterns of genomic admixture within southern Africa.

Petersen DC, Libiger O, Tindall EA, Hardie RA, Hannick LI, Glashoff RH, Mukerji M; Indian Genome Variation Consortium, Fernandez P, Haacke W, Schork NJ, Hayes VM.

PLoS Genet. 2013;9(3):e1003309. doi: 10.1371/journal.pgen.1003309. Epub 2013 Mar 14.

20.

Patterns of population epigenomic diversity.

Schmitz RJ, Schultz MD, Urich MA, Nery JR, Pelizzola M, Libiger O, Alix A, McCosh RB, Chen H, Schork NJ, Ecker JR.

Nature. 2013 Mar 14;495(7440):193-8. doi: 10.1038/nature11968. Epub 2013 Mar 6.

21.

A Method for Inferring an Individual's Genetic Ancestry and Degree of Admixture Associated with Six Major Continental Populations.

Libiger O, Schork NJ.

Front Genet. 2013 Jan 14;3:322. doi: 10.3389/fgene.2012.00322. eCollection 2012.

22.

Long-term influence of normal variation in neonatal characteristics on human brain development.

Walhovd KB, Fjell AM, Brown TT, Kuperman JM, Chung Y, Hagler DJ Jr, Roddey JC, Erhart M, McCabe C, Akshoomoff N, Amaral DG, Bloss CS, Libiger O, Schork NJ, Darst BF, Casey BJ, Chang L, Ernst TM, Frazier J, Gruen JR, Kaufmann WE, Murray SS, van Zijl P, Mostofsky S, Dale AM; Pediatric Imaging, Neurocognition, and Genetics Study.

Proc Natl Acad Sci U S A. 2012 Dec 4;109(49):20089-94. doi: 10.1073/pnas.1208180109. Epub 2012 Nov 19.

23.

Multimodal imaging of the self-regulating developing brain.

Fjell AM, Walhovd KB, Brown TT, Kuperman JM, Chung Y, Hagler DJ Jr, Venkatraman V, Roddey JC, Erhart M, McCabe C, Akshoomoff N, Amaral DG, Bloss CS, Libiger O, Darst BF, Schork NJ, Casey BJ, Chang L, Ernst TM, Gruen JR, Kaufmann WE, Kenet T, Frazier J, Murray SS, Sowell ER, van Zijl P, Mostofsky S, Jernigan TL, Dale AM; Pediatric Imaging, Neurocognition, and Genetics Study.

Proc Natl Acad Sci U S A. 2012 Nov 27;109(48):19620-5. doi: 10.1073/pnas.1208243109. Epub 2012 Nov 12.

24.

Clinical implications of human population differences in genome-wide rates of functional genotypes.

Torkamani A, Pham P, Libiger O, Bansal V, Zhang G, Scott-Van Zeeland AA, Tewhey R, Topol EJ, Schork NJ.

Front Genet. 2012 Nov 1;3:211. doi: 10.3389/fgene.2012.00211. eCollection 2012.

25.

Model-specific tests on variance heterogeneity for detection of potentially interacting genetic loci.

Hothorn LA, Libiger O, Gerhard D.

BMC Genet. 2012 Jul 18;13:59. doi: 10.1186/1471-2156-13-59.

26.

Characterization of circulating endothelial cells in acute myocardial infarction.

Damani S, Bacconi A, Libiger O, Chourasia AH, Serry R, Gollapudi R, Goldberg R, Rapeport K, Haaser S, Topol S, Knowlton S, Bethel K, Kuhn P, Wood M, Carragher B, Schork NJ, Jiang J, Rao C, Connelly M, Fowler VM, Topol EJ.

Sci Transl Med. 2012 Mar 21;4(126):126ra33. doi: 10.1126/scitranslmed.3003451.

27.

Nonparametric evaluation of quantitative traits in population-based association studies when the genetic model is unknown.

Konietschke F, Libiger O, Hothorn LA.

PLoS One. 2012;7(2):e31242. doi: 10.1371/journal.pone.0031242. Epub 2012 Feb 21.

28.

Transgenerational epigenetic instability is a source of novel methylation variants.

Schmitz RJ, Schultz MD, Lewsey MG, O'Malley RC, Urich MA, Libiger O, Schork NJ, Ecker JR.

Science. 2011 Oct 21;334(6054):369-73. doi: 10.1126/science.1212959. Epub 2011 Sep 15.

29.

A probabilistic method for the detection and genotyping of small indels from population-scale sequence data.

Bansal V, Libiger O.

Bioinformatics. 2011 Aug 1;27(15):2047-53. doi: 10.1093/bioinformatics/btr344. Epub 2011 Jun 7.

30.

Global developmental gene expression and pathway analysis of normal brain development and mouse models of human neuronal migration defects.

Pramparo T, Libiger O, Jain S, Li H, Youn YH, Hirotsune S, Schork NJ, Wynshaw-Boris A.

PLoS Genet. 2011 Mar;7(3):e1001331. doi: 10.1371/journal.pgen.1001331. Epub 2011 Mar 10.

31.
32.

Statistical analysis strategies for association studies involving rare variants.

Bansal V, Libiger O, Torkamani A, Schork NJ.

Nat Rev Genet. 2010 Nov;11(11):773-85. doi: 10.1038/nrg2867. Epub 2010 Oct 13. Review.

33.

Comparison of genetic distance measures using human SNP genotype data.

Libiger O, Nievergelt CM, Schork NJ.

Hum Biol. 2009 Aug;81(4):389-406. doi: 10.3378/027.081.0401.

PMID:
20067366
34.

Identification of EpCAM as the gene for congenital tufting enteropathy.

Sivagnanam M, Mueller JL, Lee H, Chen Z, Nelson SF, Turner D, Zlotkin SH, Pencharz PB, Ngan BY, Libiger O, Schork NJ, Lavine JE, Taylor S, Newbury RO, Kolodner RD, Hoffman HM.

Gastroenterology. 2008 Aug;135(2):429-37. doi: 10.1053/j.gastro.2008.05.036. Epub 2008 May 15.

35.

Accommodating linkage disequilibrium in genetic-association analyses via ridge regression.

Malo N, Libiger O, Schork NJ.

Am J Hum Genet. 2008 Feb;82(2):375-85. doi: 10.1016/j.ajhg.2007.10.012.

36.

A simulation-based analysis of chromosome segment sharing among a group of arbitrarily related individuals.

Libiger O, Schork NJ.

Eur J Hum Genet. 2007 Dec;15(12):1260-8. Epub 2007 Aug 15.

37.

Detecting genetic variation in microarray expression data.

Greenhall JA, Zapala MA, Cáceres M, Libiger O, Barlow C, Schork NJ, Lockhart DJ.

Genome Res. 2007 Aug;17(8):1228-35. Epub 2007 Jul 3.

38.

Generalized analysis of molecular variance.

Nievergelt CM, Libiger O, Schork NJ.

PLoS Genet. 2007 Apr 6;3(4):e51. Epub 2007 Feb 22.

39.

DNA variation and brain region-specific expression profiles exhibit different relationships between inbred mouse strains: implications for eQTL mapping studies.

Hovatta I, Zapala MA, Broide RS, Schadt EE, Libiger O, Schork NJ, Lockhart DJ, Barlow C.

Genome Biol. 2007;8(2):R25.

40.

Comprehensive linkage and linkage heterogeneity analysis of 4344 sibling pairs affected with hypertension from the Family Blood Pressure Program.

Greenwood TA, Libiger O, Kardia S, Hanis C, Morrison AC, Gu CC, Rice T, Miller M, Turner ST, Myers RH, Grove J, Hsiao CF, Weder AB, Schork NJ.

Genet Epidemiol. 2007 Apr;31(3):195-210.

41.

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