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Items: 20

1.

Comparative Genomic Analysis of Three Salmonid Species Identifies Functional Candidate Genes Involved in Resistance to the Intracellular Bacterium Piscirickettsia salmonis.

Yáñez JM, Yoshida GM, Parra Á, Correa K, Barría A, Bassini LN, Christensen KA, López ME, Carvalheiro R, Lhorente JP, Pulgar R.

Front Genet. 2019 Aug 5;10:665. doi: 10.3389/fgene.2019.00665. eCollection 2019.

2.

Fine Mapping Using Whole-Genome Sequencing Confirms Anti-Müllerian Hormone as a Major Gene for Sex Determination in Farmed Nile Tilapia (Oreochromis niloticus L.).

Cáceres G, López ME, Cádiz MI, Yoshida GM, Jedlicki AM, Palma-Véjares R, Travisany D, Díaz-Domínguez D, Maass A, Lhorente JP, Soto J, Salas D, Yáñez JM.

G3 (Bethesda). 2019 Aug 15. pii: g3.400297.2019. doi: 10.1534/g3.119.400297. [Epub ahead of print]

3.

Genome-Wide Association Analysis for Resistance to Infectious Pancreatic Necrosis Virus Identifies Candidate Genes Involved in Viral Replication and Immune Response in Rainbow Trout (Oncorhynchus mykiss).

Rodríguez FH, Flores-Mara R, Yoshida GM, Barría A, Jedlicki AM, Lhorente JP, Reyes-López F, Yáñez JM.

G3 (Bethesda). 2019 Sep 4;9(9):2897-2904. doi: 10.1534/g3.119.400463.

4.

Whole Genome Linkage Disequilibrium and Effective Population Size in a Coho Salmon (Oncorhynchus kisutch) Breeding Population Using a High-Density SNP Array.

Barría A, Christensen KA, Yoshida G, Jedlicki A, Leong JS, Rondeau EB, Lhorente JP, Koop BF, Davidson WS, Yáñez JM.

Front Genet. 2019 May 22;10:498. doi: 10.3389/fgene.2019.00498. eCollection 2019.

5.

Genome-Wide Association Study and Cost-Efficient Genomic Predictions for Growth and Fillet Yield in Nile Tilapia (Oreochromis niloticus).

Yoshida GM, Lhorente JP, Correa K, Soto J, Salas D, Yáñez JM.

G3 (Bethesda). 2019 Aug 8;9(8):2597-2607. doi: 10.1534/g3.119.400116.

6.

Discovery and Functional Annotation of Quantitative Trait Loci Affecting Resistance to Sea Lice in Atlantic Salmon.

Robledo D, Gutiérrez AP, Barría A, Lhorente JP, Houston RD, Yáñez JM.

Front Genet. 2019 Feb 8;10:56. doi: 10.3389/fgene.2019.00056. eCollection 2019.

7.

Genome-wide association analysis for body weight identifies candidate genes related to development and metabolism in rainbow trout (Oncorhynchus mykiss).

Reis Neto RV, Yoshida GM, Lhorente JP, Yáñez JM.

Mol Genet Genomics. 2019 Jun;294(3):563-571. doi: 10.1007/s00438-018-1518-2. Epub 2019 Jan 11.

PMID:
30635785
8.

Comparing genomic signatures of domestication in two Atlantic salmon (Salmo salar L.) populations with different geographical origins.

López ME, Benestan L, Moore JS, Perrier C, Gilbey J, Di Genova A, Maass A, Diaz D, Lhorente JP, Correa K, Neira R, Bernatchez L, Yáñez JM.

Evol Appl. 2018 Dec 7;12(1):137-156. doi: 10.1111/eva.12689. eCollection 2019 Jan.

9.

Population Genomic Structure and Genome-Wide Linkage Disequilibrium in Farmed Atlantic Salmon (Salmo salar L.) Using Dense SNP Genotypes.

Barria A, López ME, Yoshida G, Carvalheiro R, Lhorente JP, Yáñez JM.

Front Genet. 2018 Dec 14;9:649. doi: 10.3389/fgene.2018.00649. eCollection 2018.

10.

Genetic (co)variation in skin pigmentation patterns and growth in rainbow trout.

Rodríguez FH, Cáceres G, Lhorente JP, Newman S, Bangera R, Tadich T, Neira R, Yáñez JM.

Animal. 2019 Apr;13(4):675-682. doi: 10.1017/S175173111800188X. Epub 2018 Aug 7.

PMID:
30081971
11.

Genomic Predictions and Genome-Wide Association Study of Resistance Against Piscirickettsia salmonis in Coho Salmon (Oncorhynchus kisutch) Using ddRAD Sequencing.

Barría A, Christensen KA, Yoshida GM, Correa K, Jedlicki A, Lhorente JP, Davidson WS, Yáñez JM.

G3 (Bethesda). 2018 Mar 28;8(4):1183-1194. doi: 10.1534/g3.118.200053.

12.

Single-step genomic evaluation improves accuracy of breeding value predictions for resistance to infectious pancreatic necrosis virus in rainbow trout.

Yoshida GM, Carvalheiro R, Rodríguez FH, Lhorente JP, Yáñez JM.

Genomics. 2019 Mar;111(2):127-132. doi: 10.1016/j.ygeno.2018.01.008. Epub 2018 Jan 31.

PMID:
29357303
13.

Genomic Prediction Accuracy for Resistance Against Piscirickettsia salmonis in Farmed Rainbow Trout.

Yoshida GM, Bangera R, Carvalheiro R, Correa K, Figueroa R, Lhorente JP, Yáñez JM.

G3 (Bethesda). 2018 Feb 2;8(2):719-726. doi: 10.1534/g3.117.300499.

14.

Bayesian genome-wide association analysis for body weight in farmed Atlantic salmon (Salmo salar L.).

Yoshida GM, Lhorente JP, Carvalheiro R, Yáñez JM.

Anim Genet. 2017 Dec;48(6):698-703. doi: 10.1111/age.12621. Epub 2017 Oct 17.

PMID:
29044715
15.

The use of genomic information increases the accuracy of breeding value predictions for sea louse (Caligus rogercresseyi) resistance in Atlantic salmon (Salmo salar).

Correa K, Bangera R, Figueroa R, Lhorente JP, Yáñez JM.

Genet Sel Evol. 2017 Jan 31;49(1):15. doi: 10.1186/s12711-017-0291-8.

16.

Genomic predictions can accelerate selection for resistance against Piscirickettsia salmonis in Atlantic salmon (Salmo salar).

Bangera R, Correa K, Lhorente JP, Figueroa R, Yáñez JM.

BMC Genomics. 2017 Jan 31;18(1):121. doi: 10.1186/s12864-017-3487-y.

17.

Genomewide single nucleotide polymorphism discovery in Atlantic salmon (Salmo salar): validation in wild and farmed American and European populations.

Yáñez JM, Naswa S, López ME, Bassini L, Correa K, Gilbey J, Bernatchez L, Norris A, Neira R, Lhorente JP, Schnable PS, Newman S, Mileham A, Deeb N, Di Genova A, Maass A.

Mol Ecol Resour. 2016 Jul;16(4):1002-11. doi: 10.1111/1755-0998.12503. Epub 2016 Mar 1.

PMID:
26849107
18.

Genome-wide association analysis reveals loci associated with resistance against Piscirickettsia salmonis in two Atlantic salmon (Salmo salar L.) chromosomes.

Correa K, Lhorente JP, López ME, Bassini L, Naswa S, Deeb N, Di Genova A, Maass A, Davidson WS, Yáñez JM.

BMC Genomics. 2015 Oct 24;16:854. doi: 10.1186/s12864-015-2038-7.

19.

Disease resistance in Atlantic salmon (Salmo salar): coinfection of the intracellular bacterial pathogen Piscirickettsia salmonis and the sea louse Caligus rogercresseyi.

Lhorente JP, Gallardo JA, Villanueva B, Carabaño MJ, Neira R.

PLoS One. 2014 Apr 15;9(4):e95397. doi: 10.1371/journal.pone.0095397. eCollection 2014.

20.

The consequences of including non-additive effects on the genetic evaluation of harvest body weight in Coho salmon (Oncorhynchus kisutch).

Gallardo JA, Lhorente JP, Neira R.

Genet Sel Evol. 2010 Jun 11;42:19. doi: 10.1186/1297-9686-42-19.

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