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Gene Expression and DNA Methylation Changes in the Hypothalamus and Hippocampus of Adult Rats Developmentally Exposed to Bisphenol A or Ethinyl Estradiol: A CLARITY-BPA Consortium Study.

Cheong A, Johnson SA, Howald EC, Ellersieck MR, Camacho L, Lewis SM, Vanlandingham MM, Ying J, Ho SM, Rosenfeld CS.

Epigenetics. 2018 Jul 12. doi: 10.1080/15592294.2018.1497388. [Epub ahead of print]


Cell-surface signatures of immune dysfunction risk-stratify critically ill patients: INFECT study.

Conway Morris A, Datta D, Shankar-Hari M, Stephen J, Weir CJ, Rennie J, Antonelli J, Bateman A, Warner N, Judge K, Keenan J, Wang A, Burpee T, Brown KA, Lewis SM, Mare T, Roy AI, Hulme G, Dimmick I, Rossi AG, Simpson AJ, Walsh TS.

Intensive Care Med. 2018 May;44(5):627-635. doi: 10.1007/s00134-018-5247-0. Epub 2018 Jun 7.


Exome sequencing identified a de novo mutation of PURA gene in a patient with familial Xp22.31 microduplication.

Qiao Y, Bagheri H, Tang F, Badduke C, Martell S, Lewis SME, Robinson W, Connolly MB, Arbour L, Rajcan-Separovic E.

Eur J Med Genet. 2018 Jun 13. pii: S1769-7212(18)30006-5. doi: 10.1016/j.ejmg.2018.06.010. [Epub ahead of print]


Xylaria karyophthora: a new seed-inhabiting fungus of Greenheart from Guyana.

Husbands DR, Urbina H, Lewis SM, Aime MC.

Mycologia. 2018 Mar-Apr;110(2):434-447. doi: 10.1080/00275514.2018.1457349. Epub 2018 May 24.


Elevated temperature increases meiotic crossover frequency via the interfering (Type I) pathway in Arabidopsis thaliana.

Modliszewski JL, Wang H, Albright AR, Lewis SM, Bennett AR, Huang J, Ma H, Wang Y, Copenhaver GP.

PLoS Genet. 2018 May 17;14(5):e1007384. doi: 10.1371/journal.pgen.1007384. eCollection 2018 May.


Effects of continuous bisphenol A exposure from early gestation on 90 day old rat testes function and sperm molecular profiles: A CLARITY-BPA consortium study.

Dere E, Anderson LM, Huse SM, Spade DJ, McDonnell-Clark E, Madnick SJ, Hall SJ, Camacho L, Lewis SM, Vanlandingham MM, Boekelheide K.

Toxicol Appl Pharmacol. 2018 May 15;347:1-9. doi: 10.1016/j.taap.2018.03.021. Epub 2018 Mar 26.


Proteome profiling of extracellular vesicles captured with the affinity peptide Vn96: comparison of Laemmli and TRIzol© protein-extraction methods.

Joy AP, Ayre DC, Chute IC, Beauregard AP, Wajnberg G, Ghosh A, Lewis SM, Ouellette RJ, Barnett DA.

J Extracell Vesicles. 2018 Feb 26;7(1):1438727. doi: 10.1080/20013078.2018.1438727. eCollection 2018.


Protective Effect of Human Leukocyte Antigen (HLA) Allele DRB1*13:02 on Age-Related Brain Gray Matter Volume Reduction in Healthy Women.

James LM, Christova P, Lewis SM, Engdahl BE, Georgopoulos A, Georgopoulos AP.

EBioMedicine. 2018 Mar;29:31-37. doi: 10.1016/j.ebiom.2018.02.005. Epub 2018 Feb 8.


Photonic-band-gap gyrotron amplifier with picosecond pulses.

Nanni EA, Jawla S, Lewis SM, Shapiro MA, Temkin RJ.

Appl Phys Lett. 2017 Dec 4;111(23):233504. doi: 10.1063/1.5006348. Epub 2017 Dec 5.


Human Leukocyte Antigen (HLA) and Gulf War Illness (GWI): HLA-DRB1*13:02 Spares Subcortical Atrophy in Gulf War Veterans.

James LM, Christova P, Engdahl BE, Lewis SM, Carpenter AF, Georgopoulos AP.

EBioMedicine. 2017 Dec;26:126-131. doi: 10.1016/j.ebiom.2017.11.005. Epub 2017 Nov 9.


MolProbity: More and better reference data for improved all-atom structure validation.

Williams CJ, Headd JJ, Moriarty NW, Prisant MG, Videau LL, Deis LN, Verma V, Keedy DA, Hintze BJ, Chen VB, Jain S, Lewis SM, Arendall WB 3rd, Snoeyink J, Adams PD, Lovell SC, Richardson JS, Richardson DC.

Protein Sci. 2018 Jan;27(1):293-315. doi: 10.1002/pro.3330. Epub 2017 Nov 27.


hace1 Influences zebrafish cardiac development via ROS-dependent mechanisms.

Razaghi B, Steele SL, Prykhozhij SV, Stoyek MR, Hill JA, Cooper MD, McDonald L, Lin W, Daugaard M, Crapoulet N, Chacko S, Lewis SM, Scott IC, Sorensen PHB, Berman JN.

Dev Dyn. 2018 Feb;247(2):289-303. doi: 10.1002/dvdy.24600. Epub 2017 Oct 27.


Rubrocerebellar Feedback Loop Isolates the Interposed Nucleus as an Independent Processor of Corollary Discharge Information in Mice.

Beitzel CS, Houck BD, Lewis SM, Person AL.

J Neurosci. 2017 Oct 18;37(42):10085-10096. doi: 10.1523/JNEUROSCI.1093-17.2017. Epub 2017 Sep 15.


CD24 induces changes to the surface receptors of B cell microvesicles with variable effects on their RNA and protein cargo.

Ayre DC, Chute IC, Joy AP, Barnett DA, Hogan AM, Grüll MP, Peña-Castillo L, Lang AS, Lewis SM, Christian SL.

Sci Rep. 2017 Aug 17;7(1):8642. doi: 10.1038/s41598-017-08094-8.


Gulf War illness (GWI) as a neuroimmune disease.

Georgopoulos AP, James LM, Carpenter AF, Engdahl BE, Leuthold AC, Lewis SM.

Exp Brain Res. 2017 Oct;235(10):3217-3225. doi: 10.1007/s00221-017-5050-0. Epub 2017 Jul 31.


Subcortical brain atrophy in Gulf War Illness.

Christova P, James LM, Engdahl BE, Lewis SM, Carpenter AF, Georgopoulos AP.

Exp Brain Res. 2017 Sep;235(9):2777-2786. doi: 10.1007/s00221-017-5010-8. Epub 2017 Jun 20.


Use of Supramolecular Assemblies as Lithographic Resists.

Lewis SM, Fernandez A, DeRose GA, Hunt MS, Whitehead GFS, Lagzda A, Alty HR, Ferrando-Soria J, Varey S, Kostopoulos AK, Schedin F, Muryn CA, Timco GA, Scherer A, Yeates SG, Winpenny REP.

Angew Chem Int Ed Engl. 2017 Jun 6;56(24):6749-6752. doi: 10.1002/anie.201700224. Epub 2017 May 15.


Whole exome sequencing of families with 1q21.1 microdeletion or microduplication.

Qiao Y, Badduke C, Tang F, Cowieson D, Martell S, Lewis SME, Peñaherrera MS, Robinson WP, Volchuk A, Rajcan-Separovic E.

Am J Med Genet A. 2017 May 5. doi: 10.1002/ajmg.a.38247. [Epub ahead of print]


Case study: design and implementation of training for scientists deploying to Ebola diagnostic field laboratories in Sierra Leone: October 2014 to February 2016.

Logue CH, Lewis SM, Lansley A, Fraser S, Shieber C, Shah S, Semper A, Bailey D, Busuttil J, Evans L, Carroll MW, Silman NJ, Brooks T, Shallcross JA.

Philos Trans R Soc Lond B Biol Sci. 2017 May 26;372(1721). pii: 20160299. doi: 10.1098/rstb.2016.0299. Review.


Covalent Allosteric Inactivation of Protein Tyrosine Phosphatase 1B (PTP1B) by an Inhibitor-Electrophile Conjugate.

Punthasee P, Laciak AR, Cummings AH, Ruddraraju KV, Lewis SM, Hillebrand R, Singh H, Tanner JJ, Gates KS.

Biochemistry. 2017 Apr 11;56(14):2051-2060. doi: 10.1021/acs.biochem.7b00151. Epub 2017 Apr 3.


PML nuclear bodies contribute to the basal expression of the mTOR inhibitor DDIT4.

Salsman J, Stathakis A, Parker E, Chung D, Anthes LE, Koskowich KL, Lahsaee S, Gaston D, Kukurba KR, Smith KS, Chute IC, Léger D, Frost LD, Montgomery SB, Lewis SM, Eskiw C, Dellaire G.

Sci Rep. 2017 Mar 23;7:45038. doi: 10.1038/srep45038.


First Results from a Microwave Cavity Axion Search at 24  μeV.

Brubaker BM, Zhong L, Gurevich YV, Cahn SB, Lamoreaux SK, Simanovskaia M, Root JR, Lewis SM, Al Kenany S, Backes KM, Urdinaran I, Rapidis NM, Shokair TM, van Bibber KA, Palken DA, Malnou M, Kindel WF, Anil MA, Lehnert KW, Carosi G.

Phys Rev Lett. 2017 Feb 10;118(6):061302. doi: 10.1103/PhysRevLett.118.061302. Epub 2017 Feb 9.


Postretrieval Extinction Attenuates Alcohol Cue Reactivity in Rats.

Cofresí RU, Lewis SM, Chaudhri N, Lee HJ, Monfils MH, Gonzales RA.

Alcohol Clin Exp Res. 2017 Mar;41(3):608-617. doi: 10.1111/acer.13323. Epub 2017 Feb 7.


Molecular characterization of firefly nuptial gifts: a multi-omics approach sheds light on postcopulatory sexual selection.

Al-Wathiqui N, Fallon TR, South A, Weng JK, Lewis SM.

Sci Rep. 2016 Dec 22;6:38556. doi: 10.1038/srep38556.


Identity-by-descent estimation with population- and pedigree-based imputation in admixed family data.

Saad M, Nato AQ Jr, Grimson FL, Lewis SM, Brown LA, Blue EM, Thornton TA, Thompson EA, Wijsman EM.

BMC Proc. 2016 Oct 18;10(Suppl 7):295-301. eCollection 2016.


Multimodal signals: ultraviolet reflectance and chemical cues in stomatopod agonistic encounters.

Franklin AM, Marshall NJ, Lewis SM.

R Soc Open Sci. 2016 Aug 3;3(8):160329. eCollection 2016 Aug.


A Magnetoencephalographic (MEG) Study of Gulf War Illness (GWI).

Engdahl BE, James LM, Miller RD, Leuthold AC, Lewis SM, Carpenter AF, Georgopoulos AP.

EBioMedicine. 2016 Oct;12:127-132. doi: 10.1016/j.ebiom.2016.08.030. Epub 2016 Aug 22.


Cortical miscommunication after prenatal exposure to alcohol.

Lewis SM, Vydrová RR, Leuthold AC, Georgopoulos AP.

Exp Brain Res. 2016 Nov;234(11):3347-3353. Epub 2016 Aug 4.


Identifying candidate genes for 2p15p16.1 microdeletion syndrome using clinical, genomic, and functional analysis.

Bagheri H, Badduke C, Qiao Y, Colnaghi R, Abramowicz I, Alcantara D, Dunham C, Wen J, Wildin RS, Nowaczyk MJ, Eichmeyer J, Lehman A, Maranda B, Martell S, Shan X, Lewis SM, O'Driscoll M, Gregory-Evans CY, Rajcan-Separovic E.

JCI Insight. 2016 Mar 17;1(3):e85461.


Sex-related differential susceptibility to doxorubicin-induced cardiotoxicity in B6C3F1 mice.

Jenkins GR, Lee T, Moland CL, Vijay V, Herman EH, Lewis SM, Davis KJ, Muskhelishvili L, Kerr S, Fuscoe JC, Desai VG.

Toxicol Appl Pharmacol. 2016 Nov 1;310:159-174. doi: 10.1016/j.taap.2016.09.012. Epub 2016 Sep 17.


Safety of Computer Interpretation of Normal Triage Electrocardiograms.

Hughes KE, Lewis SM, Katz L, Jones J.

Acad Emerg Med. 2017 Jan;24(1):120-124. doi: 10.1111/acem.13067.


Toxicity Evaluation of Bisphenol A Administered by Gavage to Sprague Dawley Rats From Gestation Day 6 Through Postnatal Day 90.

Delclos KB, Camacho L, Lewis SM, Vanlandingham MM, Latendresse JR, Olson GR, Davis KJ, Patton RE, Gamboa da Costa G, Woodling KA, Bryant MS, Chidambaram M, Trbojevich R, Juliar BE, Felton RP, Thorn BT.

Toxicol Sci. 2016 Sep;153(1):212. doi: 10.1093/toxsci/kfw123. Epub 2016 Aug 9. No abstract available.


Early PREdiction of Severe Sepsis (ExPRES-Sepsis) study: protocol for an observational derivation study to discover potential leucocyte cell surface biomarkers.

Datta D, Conway Morris A, Antonelli J, Warner N, Brown KA, Wright J, Simpson AJ, Rennie J, Hulme G, Lewis SM, Mare TA, Cookson S, Weir CJ, Dimmick I, Keenan J, Rossi AG, Shankar-Hari M, Walsh TS; ExPRES Sepsis Investigators.

BMJ Open. 2016 Aug 1;6(8):e011335. doi: 10.1136/bmjopen-2016-011335.


Postmating transcriptional changes in the female reproductive tract of the European corn borer moth.

Al-Wathiqui N, Dopman EB, Lewis SM.

Insect Mol Biol. 2016 Oct;25(5):629-45. doi: 10.1111/imb.12249. Epub 2016 Jun 22.


Comparison of endpoints relevant to toxicity assessments in 3 generations of CD-1 mice fed irradiated natural and purified ingredient diets with varying soy protein and isoflavone contents.

Camacho L, Lewis SM, Vanlandingham MM, Juliar BE, Olson GR, Patton RE, Gamboa da Costa G, Woodling K, Sepehr E, Bryant MS, Doerge DR, Basavarajappa MS, Felton RP, Delclos KB.

Food Chem Toxicol. 2016 Aug;94:39-56. doi: 10.1016/j.fct.2016.05.014. Epub 2016 May 24.


Targeting cytokines as a treatment for patients with sepsis: A lost cause or a strategy still worthy of pursuit?

Brown KA, Brown GA, Lewis SM, Beale R, Treacher DF.

Int Immunopharmacol. 2016 Jul;36:291-299. doi: 10.1016/j.intimp.2016.04.041. Epub 2016 May 19. Review.


Mechanism of Lysine 48 Selectivity during Polyubiquitin Chain Formation by the Ube2R1/2 Ubiquitin-Conjugating Enzyme.

Hill S, Harrison JS, Lewis SM, Kuhlman B, Kleiger G.

Mol Cell Biol. 2016 May 16;36(11):1720-32. doi: 10.1128/MCB.00097-16. Print 2016 Jun 1.


Molprobity's ultimate rotamer-library distributions for model validation.

Hintze BJ, Lewis SM, Richardson JS, Richardson DC.

Proteins. 2016 Sep;84(9):1177-89. doi: 10.1002/prot.25039. Epub 2016 Jun 23.


Early transcriptional changes in cardiac mitochondria during chronic doxorubicin exposure and mitigation by dexrazoxane in mice.

Vijay V, Moland CL, Han T, Fuscoe JC, Lee T, Herman EH, Jenkins GR, Lewis SM, Cummings CA, Gao Y, Cao Z, Yu LR, Desai VG.

Toxicol Appl Pharmacol. 2016 Mar 15;295:68-84. doi: 10.1016/j.taap.2016.02.003. Epub 2016 Feb 9.


The tryptophan metabolism enzyme L-kynureninase is a novel inflammatory factor in psoriasis and other inflammatory diseases.

Harden JL, Lewis SM, Lish SR, Suárez-Fariñas M, Gareau D, Lentini T, Johnson-Huang LM, Krueger JG, Lowes MA.

J Allergy Clin Immunol. 2016 Jun;137(6):1830-1840. doi: 10.1016/j.jaci.2015.09.055. Epub 2015 Dec 22.


Engineering a genetically encoded competitive inhibitor of the KEAP1-NRF2 interaction via structure-based design and phage display.

Guntas G, Lewis SM, Mulvaney KM, Cloer EW, Tripathy A, Lane TR, Major MB, Kuhlman B.

Protein Eng Des Sel. 2016 Jan;29(1):1-9. doi: 10.1093/protein/gzv055. Epub 2015 Oct 20.


Effects of developmental exposure to bisphenol A on spatial navigational learning and memory in rats: A CLARITY-BPA study.

Johnson SA, Javurek AB, Painter MS, Ellersieck MR, Welsh TH Jr, Camacho L, Lewis SM, Vanlandingham MM, Ferguson SA, Rosenfeld CS.

Horm Behav. 2016 Apr;80:139-148. doi: 10.1016/j.yhbeh.2015.09.005. Epub 2015 Oct 5.


Enteral nutrition in head and neck cancer patients treated with intensity-modulated radiotherapy at a United Kingdom cancer centre.

Lewis SM.

Clin Nutr ESPEN. 2015 Oct;10(5):e196. doi: 10.1016/j.clnesp.2015.03.045. Epub 2015 Aug 28. No abstract available.


Off-Target V(D)J Recombination Drives Lymphomagenesis and Is Escalated by Loss of the Rag2 C Terminus.

Mijušković M, Chou YF, Gigi V, Lindsay CR, Shestova O, Lewis SM, Roth DB.

Cell Rep. 2015 Sep 22;12(11):1842-52. doi: 10.1016/j.celrep.2015.08.034. Epub 2015 Sep 10.


Inactivation of protein tyrosine phosphatases by dietary isothiocyanates.

Lewis SM, Li Y, Catalano MJ, Laciak AR, Singh H, Seiner DR, Reilly TJ, Tanner JJ, Gates KS.

Bioorg Med Chem Lett. 2015 Oct 15;25(20):4549-52. doi: 10.1016/j.bmcl.2015.08.065. Epub 2015 Aug 24.


What is your diagnosis? Cutaneous mass in a dog.

Asakawa MG, Lewis SM, Buckles EL, Stokol T.

Vet Clin Pathol. 2015 Dec;44(4):607-8. doi: 10.1111/vcp.12280. Epub 2015 Aug 19. No abstract available.


NIEHS/FDA CLARITY-BPA research program update.

Heindel JJ, Newbold RR, Bucher JR, Camacho L, Delclos KB, Lewis SM, Vanlandingham M, Churchwell MI, Twaddle NC, McLellen M, Chidambaram M, Bryant M, Woodling K, Gamboa da Costa G, Ferguson SA, Flaws J, Howard PC, Walker NJ, Zoeller RT, Fostel J, Favaro C, Schug TT.

Reprod Toxicol. 2015 Dec;58:33-44. doi: 10.1016/j.reprotox.2015.07.075. Epub 2015 Jul 29. Review.


Expression of CD11c and EMR2 on neutrophils: potential diagnostic biomarkers for sepsis and systemic inflammation.

Lewis SM, Treacher DF, Edgeworth J, Mahalingam G, Brown CS, Mare TA, Stacey M, Beale R, Brown KA.

Clin Exp Immunol. 2015 Nov;182(2):184-94. doi: 10.1111/cei.12679. Epub 2015 Sep 22.


Diagnosis of posttraumatic stress disorder (PTSD) based on correlations of prewhitened fMRI data: outcomes and areas involved.

Christova P, James LM, Engdahl BE, Lewis SM, Georgopoulos AP.

Exp Brain Res. 2015 Sep;233(9):2695-705. doi: 10.1007/s00221-015-4339-0. Epub 2015 Jun 13.


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