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Household point of care CD4 testing and isoniazid preventive therapy initiation in a household TB contact tracing programme in two districts of South Africa.

Page-Shipp L, Lewis JJ, Velen K, Senoge S, Zishiri E, Popane F, Chihota VN, Clark D, Churchyard GJ, Charalambous S.

PLoS One. 2018 Mar 2;13(3):e0192089. doi: 10.1371/journal.pone.0192089. eCollection 2018.


Black patients sustain vision loss while White and South Asian patients gain vision following delamination or segmentation surgery for tractional complications associated with proliferative diabetic retinopathy.

Mastropasqua R, Luo YH, Cheah YS, Egan C, Lewis JJ, da Cruz L.

Eye (Lond). 2017 Oct;31(10):1468-1474. doi: 10.1038/eye.2017.95. Epub 2017 Jun 2.


Complex modular architecture around a simple toolkit of wing pattern genes.

Van Belleghem SM, Rastas P, Papanicolaou A, Martin SH, Arias CF, Supple MA, Hanly JJ, Mallet J, Lewis JJ, Hines HM, Ruiz M, Salazar C, Linares M, Moreira GRP, Jiggins CD, Counterman BA, McMillan WO, Papa R.

Nat Ecol Evol. 2017;1(3):52. doi: 10.1038/s41559-016-0052. Epub 2017 Jan 30.


A randomized controlled study of socioeconomic support to enhance tuberculosis prevention and treatment, Peru.

Wingfield T, Tovar MA, Huff D, Boccia D, Montoya R, Ramos E, Datta S, Saunders MJ, Lewis JJ, Gilman RH, Evans CA.

Bull World Health Organ. 2017 Apr 1;95(4):270-280. doi: 10.2471/BLT.16.170167. Epub 2017 Feb 9.


Steroid-Induced Psychosis after EUS-Guided Celiac Plexus Blockade.

Olson DC, Lewis JJ.

ACG Case Rep J. 2017 Jan 18;4:e11. doi: 10.14309/crj.2017.11. eCollection 2017.


Beyond pills and tests: addressing the social determinants of tuberculosis.

Wingfield T, Tovar MA, Huff D, Boccia D, Saunders MJ, Datta S, Montoya R, Ramos E, Lewis JJ, Gilman RH, Evans C.

Clin Med (Lond). 2016 Dec;16(Suppl 6):s79-s91.


Socioeconomic Determinants of Antibiotic Consumption in the State of São Paulo, Brazil: The Effect of Restricting Over-The-Counter Sales.

Kliemann BS, Levin AS, Moura ML, Boszczowski I, Lewis JJ.

PLoS One. 2016 Dec 12;11(12):e0167885. doi: 10.1371/journal.pone.0167885. eCollection 2016.


Multiple behaviour change intervention for diarrhoea control in Lusaka, Zambia: a cluster randomised trial.

Greenland K, Chipungu J, Curtis V, Schmidt WP, Siwale Z, Mudenda M, Chilekwa J, Lewis JJ, Chilengi R.

Lancet Glob Health. 2016 Dec;4(12):e966-e977. doi: 10.1016/S2214-109X(16)30262-5.


The economic effects of supporting tuberculosis-affected households in Peru.

Wingfield T, Tovar MA, Huff D, Boccia D, Montoya R, Ramos E, Lewis JJ, Gilman RH, Evans CA.

Eur Respir J. 2016 Nov;48(5):1396-1410. doi: 10.1183/13993003.00066-2016. Epub 2016 Sep 22.


Biogas Stoves Reduce Firewood Use, Household Air Pollution, and Hospital Visits in Odisha, India.

Lewis JJ, Hollingsworth JW, Chartier RT, Cooper EM, Foster WM, Gomes GL, Kussin PS, MacInnis JJ, Padhi BK, Panigrahi P, Rodes CE, Ryde IT, Singha AK, Stapleton HM, Thornburg J, Young CJ, Meyer JN, Pattanayak SK.

Environ Sci Technol. 2017 Jan 3;51(1):560-569. doi: 10.1021/acs.est.6b02466. Epub 2016 Dec 19.


ChIP-Seq-Annotated Heliconius erato Genome Highlights Patterns of cis-Regulatory Evolution in Lepidoptera.

Lewis JJ, van der Burg KRL, Mazo-Vargas A, Reed RD.

Cell Rep. 2016 Sep 13;16(11):2855-2863. doi: 10.1016/j.celrep.2016.08.042.


PICASSO III: A Phase III, Placebo-Controlled Study of Doxorubicin With or Without Palifosfamide in Patients With Metastatic Soft Tissue Sarcoma.

Ryan CW, Merimsky O, Agulnik M, Blay JY, Schuetze SM, Van Tine BA, Jones RL, Elias AD, Choy E, Alcindor T, Keedy VL, Reed DR, Taub RN, Italiano A, Garcia Del Muro X, Judson IR, Buck JY, Lebel F, Lewis JJ, Maki RG, Schöffski P.

J Clin Oncol. 2016 Nov 10;34(32):3898-3905. doi: 10.1200/JCO.2016.67.6684. Epub 2016 Sep 30.


A mixed methods protocol to evaluate the effect and cost-effectiveness of an Integrated electronic Diagnosis Approach (IeDA) for the management of childhood illnesses at primary health facilities in Burkina Faso.

Blanchet K, Lewis JJ, Pozo-Martin F, Satouro A, Somda S, Ilboudo P, Sarrassat S, Cousens S.

Implement Sci. 2016 Aug 4;11(1):111. doi: 10.1186/s13012-016-0476-5.


Cost-Effectiveness of Automated Digital Microscopy for Diagnosis of Active Tuberculosis.

Jha S, Ismail N, Clark D, Lewis JJ, Omar S, Dreyer A, Chihota V, Churchyard G, Dowdy DW.

PLoS One. 2016 Jun 20;11(6):e0157554. doi: 10.1371/journal.pone.0157554. eCollection 2016.


Household HIV Testing Uptake among Contacts of TB Patients in South Africa.

Velen K, Lewis JJ, Charalambous S, Page-Shipp L, Popane F, Churchyard GJ, Hoffmann CJ.

PLoS One. 2016 May 19;11(5):e0155688. doi: 10.1371/journal.pone.0155688. eCollection 2016.


The timing of tuberculosis after isoniazid preventive therapy among gold miners in South Africa: a prospective cohort study.

Hermans SM, Grant AD, Chihota V, Lewis JJ, Vynnycky E, Churchyard GJ, Fielding KL.

BMC Med. 2016 Mar 23;14:45. doi: 10.1186/s12916-016-0589-3.


Effectiveness and safety of misoprostol distributed to antenatal women to prevent postpartum haemorrhage after child-births: a stepped-wedge cluster-randomized trial.

Ononge S, Campbell OM, Kaharuza F, Lewis JJ, Fielding K, Mirembe F.

BMC Pregnancy Childbirth. 2015 Nov 26;15:315. doi: 10.1186/s12884-015-0750-6.


Frequency of HIV-testing and factors associated with multiple lifetime HIV-testing among a rural population of Zambian men.

Hensen B, Lewis JJ, Schaap A, Tembo M, Vera-Hernández M, Mutale W, Weiss HA, Hargreaves J, Stringer J, Ayles H.

BMC Public Health. 2015 Sep 24;15:960. doi: 10.1186/s12889-015-2259-3.


Effectiveness of Electronic Reminders to Improve Medication Adherence in Tuberculosis Patients: A Cluster-Randomised Trial.

Liu X, Lewis JJ, Zhang H, Lu W, Zhang S, Zheng G, Bai L, Li J, Li X, Chen H, Liu M, Chen R, Chi J, Lu J, Huan S, Cheng S, Wang L, Jiang S, Chin DP, Fielding KL.

PLoS Med. 2015 Sep 15;12(9):e1001876. doi: 10.1371/journal.pmed.1001876. eCollection 2015 Sep.


Brief Report: The Effect of Antiretroviral Therapy and CD4 Count on Markers of Infectiousness in HIV-Associated Tuberculosis.

van Halsema CL, Fielding KL, Chihota VN, George EC, Lewis JJ, Churchyard GJ, Grant AD.

J Acquir Immune Defic Syndr. 2015 Sep 1;70(1):104-8. doi: 10.1097/QAI.0000000000000684.


Designing and implementing a socioeconomic intervention to enhance TB control: operational evidence from the CRESIPT project in Peru.

Wingfield T, Boccia D, Tovar MA, Huff D, Montoya R, Lewis JJ, Gilman RH, Evans CA.

BMC Public Health. 2015 Aug 21;15:810. doi: 10.1186/s12889-015-2128-0.


Designing a stepped wedge trial: three main designs, carry-over effects and randomisation approaches.

Copas AJ, Lewis JJ, Thompson JA, Davey C, Baio G, Hargreaves JR.

Trials. 2015 Aug 17;16:352. doi: 10.1186/s13063-015-0842-7.


Five questions to consider before conducting a stepped wedge trial.

Hargreaves JR, Copas AJ, Beard E, Osrin D, Lewis JJ, Davey C, Thompson JA, Baio G, Fielding KL, Prost A.

Trials. 2015 Aug 17;16:350. doi: 10.1186/s13063-015-0841-8.


Stepped wedge randomised controlled trials: systematic review of studies published between 2010 and 2014.

Beard E, Lewis JJ, Copas A, Davey C, Osrin D, Baio G, Thompson JA, Fielding KL, Omar RZ, Ononge S, Hargreaves J, Prost A.

Trials. 2015 Aug 17;16:353. doi: 10.1186/s13063-015-0839-2. Review.


Analysis and reporting of stepped wedge randomised controlled trials: synthesis and critical appraisal of published studies, 2010 to 2014.

Davey C, Hargreaves J, Thompson JA, Copas AJ, Beard E, Lewis JJ, Fielding KL.

Trials. 2015 Aug 17;16:358. doi: 10.1186/s13063-015-0838-3. Review.


Logistic, ethical, and political dimensions of stepped wedge trials: critical review and case studies.

Prost A, Binik A, Abubakar I, Roy A, De Allegri M, Mouchoux C, Dreischulte T, Ayles H, Lewis JJ, Osrin D.

Trials. 2015 Aug 17;16:351. doi: 10.1186/s13063-015-0837-4. Review.


Clinical Relevance of Nontuberculous Mycobacteria Isolated from Sputum in a Gold Mining Workforce in South Africa: An Observational, Clinical Study.

van Halsema CL, Chihota VN, Gey van Pittius NC, Fielding KL, Lewis JJ, van Helden PD, Churchyard GJ, Grant AD.

Biomed Res Int. 2015;2015:959107. doi: 10.1155/2015/959107. Epub 2015 May 28.


Atypical Meningiomas: Recurrence, Reoperation, and Radiotherapy.

Klinger DR, Flores BC, Lewis JJ, Hatanpaa K, Choe K, Mickey B, Barnett S.

World Neurosurg. 2015 Sep;84(3):839-45. doi: 10.1016/j.wneu.2015.04.033. Epub 2015 Apr 25.


Piloting improved cookstoves in India.

Lewis JJ, Bhojvaid V, Brooks N, Das I, Jeuland MA, Patange O, Pattanayak SK.

J Health Commun. 2015;20 Suppl 1:28-42. doi: 10.1080/10810730.2014.994243.


Performance of a Novel Algorithm Using Automated Digital Microscopy for Diagnosing Tuberculosis.

Ismail NA, Omar SV, Lewis JJ, Dowdy DW, Dreyer AW, van der Meulen H, Nconjana G, Clark DA, Churchyard GJ.

Am J Respir Crit Care Med. 2015 Jun 15;191(12):1443-9. doi: 10.1164/rccm.201502-0390OC.


Tuberculosis control in South African gold mines: mathematical modeling of a trial of community-wide isoniazid preventive therapy.

Vynnycky E, Sumner T, Fielding KL, Lewis JJ, Cox AP, Hayes RJ, Corbett EL, Churchyard GJ, Grant AD, White RG.

Am J Epidemiol. 2015 Apr 15;181(8):619-32. doi: 10.1093/aje/kwu320. Epub 2015 Mar 19.


Molecular epidemiology of Mycobacterium tuberculosis among South African gold miners.

Mathema B, Lewis JJ, Connors J, Chihota VN, Shashkina E, van der Meulen M, Graviss EA, Ha NP, Kreiswirth BN, Grant AD, Fielding KL, Dorman SE, Churchyard GJ.

Ann Am Thorac Soc. 2015 Jan;12(1):12-20. doi: 10.1513/AnnalsATS.201404-150OC.


Factors associated with HIV-testing and acceptance of an offer of home-based testing by men in rural Zambia.

Hensen B, Lewis JJ, Schaap A, Tembo M, Mutale W, Weiss HA, Hargreaves J, Ayles H.

AIDS Behav. 2015 Mar;19(3):492-504. doi: 10.1007/s10461-014-0866-0.


Systematic review of strategies to increase men's HIV-testing in sub-Saharan Africa.

Hensen B, Taoka S, Lewis JJ, Weiss HA, Hargreaves J.

AIDS. 2014 Sep 10;28(14):2133-45. Review.


Successful endoscopic resection of adenocarcinoma arising in an esophageal inlet patch.

Hudspeth VR, Smith DS, Pacicco T, Lewis JJ.

Dis Esophagus. 2016 Oct;29(7):880-882. doi: 10.1111/dote.12249. Epub 2014 Jun 24.


The seasonality of tuberculosis, sunlight, vitamin D, and household crowding.

Wingfield T, Schumacher SG, Sandhu G, Tovar MA, Zevallos K, Baldwin MR, Montoya R, Ramos ES, Jongkaewwattana C, Lewis JJ, Gilman RH, Friedland JS, Evans CA.

J Infect Dis. 2014 Sep 1;210(5):774-83. doi: 10.1093/infdis/jiu121. Epub 2014 Mar 4.


How do people in rural India perceive improved stoves and clean fuel? Evidence from Uttar Pradesh and Uttarakhand.

Bhojvaid V, Jeuland M, Kar A, Lewis JJ, Pattanayak SK, Ramanathan N, Ramanathan V, Rehman IH.

Int J Environ Res Public Health. 2014 Jan 27;11(2):1341-58. doi: 10.3390/ijerph110201341.


A trial of mass isoniazid preventive therapy for tuberculosis control.

Churchyard GJ, Fielding KL, Lewis JJ, Coetzee L, Corbett EL, Godfrey-Faussett P, Hayes RJ, Chaisson RE, Grant AD; Thibela TB Study Team.

N Engl J Med. 2014 Jan 23;370(4):301-10. doi: 10.1056/NEJMoa1214289.


Treatment outcomes of multidrug-resistant tuberculosis patients in Gauteng, South Africa.

Marais E, Mlambo CK, Lewis JJ, Rastogi N, Zozio T, Grobusch MP, Duse A, Victor T, Warren RW.

Infection. 2014 Apr;42(2):405-13. doi: 10.1007/s15010-013-0572-2. Epub 2013 Dec 21.


The treatment of cavernous sinus meningiomas: evolution of a modern approach.

Klinger DR, Flores BC, Lewis JJ, Barnett SL.

Neurosurg Focus. 2013 Dec;35(6):E8. doi: 10.3171/2013.9.FOCUS13345. Review.


Eligibility for isoniazid preventive therapy in South African gold mines.

Lewis JJ, Fielding KL, Grant AD, Chihota VN, Popane F, Luttig M, Muller D, Coetzee L, Churchyard GJ.

PLoS One. 2013 Nov 14;8(11):e81376. doi: 10.1371/journal.pone.0081376. eCollection 2013.


Comparison of tenofovir, zidovudine, or stavudine as part of first-line antiretroviral therapy in a resource-limited-setting: a cohort study.

Velen K, Lewis JJ, Charalambous S, Grant AD, Churchyard GJ, Hoffmann CJ.

PLoS One. 2013 May 14;8(5):e64459. doi: 10.1371/journal.pone.0064459. Print 2013.


Genomic architecture of adaptive color pattern divergence and convergence in Heliconius butterflies.

Supple MA, Hines HM, Dasmahapatra KK, Lewis JJ, Nielsen DM, Lavoie C, Ray DA, Salazar C, McMillan WO, Counterman BA.

Genome Res. 2013 Aug;23(8):1248-57. doi: 10.1101/gr.150615.112. Epub 2013 May 14.


Immune reconstitution inflammatory syndrome associated with Kaposi sarcoma: higher incidence and mortality in Africa than in the UK.

Letang E, Lewis JJ, Bower M, Mosam A, Borok M, Campbell TB, Naniche D, Newsom-Davis T, Shaik F, Fiorillo S, Miro JM, Schellenberg D, Easterbrook PJ.

AIDS. 2013 Jun 19;27(10):1603-13. doi: 10.1097/QAD.0b013e328360a5a1.


Mortality associated with delays between clinic entry and ART initiation in resource-limited settings: results of a transition-state model.

Hoffmann CJ, Lewis JJ, Dowdy DW, Fielding KL, Grant AD, Martinson NA, Churchyard GJ, Chaisson RE.

J Acquir Immune Defic Syndr. 2013 May 1;63(1):105-11. doi: 10.1097/QAI.0b013e3182893fb4.


"Proof-of-concept" evaluation of an automated sputum smear microscopy system for tuberculosis diagnosis.

Lewis JJ, Chihota VN, van der Meulen M, Fourie PB, Fielding KL, Grant AD, Dorman SE, Churchyard GJ.

PLoS One. 2012;7(11):e50173. doi: 10.1371/journal.pone.0050173. Epub 2012 Nov 29.


Endoscopic ultrasound and fine needle aspiration in pancreatic cancer.

Lewis JJ, Kowalski TE.

Cancer J. 2012 Nov-Dec;18(6):523-9. doi: 10.1097/PPO.0b013e318277008e. Review.


Performance characteristics of the Cepheid Xpert MTB/RIF test in a tuberculosis prevalence survey.

Dorman SE, Chihota VN, Lewis JJ, Shah M, Clark D, Grant AD, Churchyard GJ, Fielding KL.

PLoS One. 2012;7(8):e43307. doi: 10.1371/journal.pone.0043307. Epub 2012 Aug 15.


Trends in drug-resistant tuberculosis in a gold-mining workforce in South Africa, 2002-2008.

van Halsema CL, Fielding KL, Chihota VN, Lewis JJ, Churchyard GJ, Grant AD.

Int J Tuberc Lung Dis. 2012 Jul;16(7):967-73. doi: 10.5588/ijtld.11.0122. Epub 2012 May 7.


Who adopts improved fuels and cookstoves? A systematic review.

Lewis JJ, Pattanayak SK.

Environ Health Perspect. 2012 May;120(5):637-45. doi: 10.1289/ehp.1104194. Epub 2012 Feb 1. Review.

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