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The Minor Impurity in Spent Ores of the "Siberian Metal": Ruthenium Turns 175.

Lewis DE.

Chemistry. 2019 Sep 2;25(49):11394-11401. doi: 10.1002/chem.201901922. Epub 2019 Aug 1. Review.


Editorial: T Cell Alterations in Adipose Tissue During Obesity, HIV, and Cancer.

Lewis DE, Lysaght J, Wu H.

Front Immunol. 2019 May 28;10:1190. doi: 10.3389/fimmu.2019.01190. eCollection 2019. No abstract available.


Lymphocytes upregulate CD36 in adipose tissue and liver.

Couturier J, Nuotio-Antar AM, Agarwal N, Wilkerson GK, Saha P, Kulkarni V, Lakhashe SK, Esquivel J, Nehete PN, Ruprecht RM, Sastry KJ, Meyer JM, Hill LR, Lake JE, Balasubramanyam A, Lewis DE.

Adipocyte. 2019 Dec;8(1):154-163. doi: 10.1080/21623945.2019.1609202.


Regulation of cyclin T1 during HIV replication and latency establishment in human memory CD4 T cells.

Couturier J, Orozco AF, Liu H, Budhiraja S, Siwak EB, Nehete PN, Sastry KJ, Rice AP, Lewis DE.

Virol J. 2019 Feb 20;16(1):22. doi: 10.1186/s12985-019-1128-6.


Modulating PCAF/GCN5 Immune Cell Function through a PROTAC Approach.

Bassi ZI, Fillmore MC, Miah AH, Chapman TD, Maller C, Roberts EJ, Davis LC, Lewis DE, Galwey NW, Waddington KE, Parravicini V, Macmillan-Jones AL, Gongora C, Humphreys PG, Churcher I, Prinjha RK, Tough DF.

ACS Chem Biol. 2018 Oct 19;13(10):2862-2867. doi: 10.1021/acschembio.8b00705. Epub 2018 Sep 18.


HIV-1 replication in CD4+ T cells exploits the down-regulation of antiviral NEAT1 long non-coding RNAs following T cell activation.

Liu H, Hu PW, Couturier J, Lewis DE, Rice AP.

Virology. 2018 Sep;522:193-198. doi: 10.1016/j.virol.2018.07.020. Epub 2018 Jul 20.


Static to Dynamic: Kazan Chemists and the Transformation from Chemical Structure to Reaction Regiochemistry.

Lewis DE.

Angew Chem Int Ed Engl. 2019 Mar 18;58(12):3694-3705. doi: 10.1002/anie.201804036. Epub 2019 Feb 18. Review.


PD-1 blocks lytic granule polarization with concomitant impairment of integrin outside-in signaling in the natural killer cell immunological synapse.

Huang Y, Chen Z, Jang JH, Baig MS, Bertolet G, Schroeder C, Huang S, Hu Q, Zhao Y, Lewis DE, Qin L, Zhu MX, Liu D.

J Allergy Clin Immunol. 2018 Oct;142(4):1311-1321.e8. doi: 10.1016/j.jaci.2018.02.050. Epub 2018 Apr 18.


Adipocytes impair efficacy of antiretroviral therapy.

Couturier J, Winchester LC, Suliburk JW, Wilkerson GK, Podany AT, Agarwal N, Xuan Chua CY, Nehete PN, Nehete BP, Grattoni A, Sastry KJ, Fletcher CV, Lake JE, Balasubramanyam A, Lewis DE.

Antiviral Res. 2018 Jun;154:140-148. doi: 10.1016/j.antiviral.2018.04.002. Epub 2018 Apr 6.


HIV Persistence in Adipose Tissue Reservoirs.

Couturier J, Lewis DE.

Curr HIV/AIDS Rep. 2018 Feb;15(1):60-71. doi: 10.1007/s11904-018-0378-z. Review.


Sphingosine-1-phosphate receptor 1 mediates elevated IL-6 signaling to promote chronic inflammation and multitissue damage in sickle cell disease.

Zhao S, Adebiyi MG, Zhang Y, Couturier JP, Fan X, Zhang H, Kellems RE, Lewis DE, Xia Y.

FASEB J. 2018 May;32(5):2855-2865. doi: 10.1096/fj.201600788RR. Epub 2018 Jan 17.


Looking Behavior and Audiovisual Speech Understanding in Children With Normal Hearing and Children With Mild Bilateral or Unilateral Hearing Loss.

Lewis DE, Smith NA, Spalding JL, Valente DL.

Ear Hear. 2018 Jul/Aug;39(4):783-794. doi: 10.1097/AUD.0000000000000534.


The Developmental Switch in Bacteriophage λ: A Critical Role of the Cro Protein.

Lee S, Lewis DEA, Adhya S.

J Mol Biol. 2018 Jan 5;430(1):58-68. doi: 10.1016/j.jmb.2017.11.005. Epub 2017 Nov 20.


Treatment-Naïve HIV-Infected Patients Have Fewer Gut-Homing β7 Memory CD4 T Cells than Healthy Controls.

Fadul N, Couturier J, Yu X, Kozinetz C, Arduino R, Lewis DE.

South Med J. 2017 Nov;110(11):709-713. doi: 10.14423/SMJ.0000000000000730.


HIV-1 viral protein R (Vpr) induces fatty liver in mice via LXRα and PPARα dysregulation: implications for HIV-specific pathogenesis of NAFLD.

Agarwal N, Iyer D, Gabbi C, Saha P, Patel SG, Mo Q, Chang B, Goswami B, Schubert U, Kopp JB, Lewis DE, Balasubramanyam A.

Sci Rep. 2017 Oct 17;7(1):13362. doi: 10.1038/s41598-017-13835-w.


Aleksei Yevgen'evich Chichibabin (1871-1945): A Century of Pyridine Chemistry.

Lewis DE.

Angew Chem Int Ed Engl. 2017 Aug 7;56(33):9660-9668. doi: 10.1002/anie.201611724. Epub 2017 Jun 12. Review.


Recapitulating the human tumor microenvironment: Colon tumor-derived extracellular matrix promotes angiogenesis and tumor cell growth.

Romero-López M, Trinh AL, Sobrino A, Hatch MM, Keating MT, Fimbres C, Lewis DE, Gershon PD, Botvinick EL, Digman M, Lowengrub JS, Hughes CC.

Biomaterials. 2017 Feb;116:118-129. doi: 10.1016/j.biomaterials.2016.11.034. Epub 2016 Nov 24.


Genome-Wide Transcriptional Regulation and Chromosome Structural Arrangement by GalR in E. coli.

Qian Z, Trostel A, Lewis DE, Lee SJ, He X, Stringer AM, Wade JT, Schneider TD, Durfee T, Adhya S.

Front Mol Biosci. 2016 Nov 16;3:74. eCollection 2016.


Postprandial Monocyte Activation in Individuals With Metabolic Syndrome.

Khan IM, Pokharel Y, Dadu RT, Lewis DE, Hoogeveen RC, Wu H, Ballantyne CM.

J Clin Endocrinol Metab. 2016 Nov;101(11):4195-4204. Epub 2016 Aug 30.


New Insights into the Phage Genetic Switch: Effects of Bacteriophage Lambda Operator Mutations on DNA Looping and Regulation of PR, PL, and PRM.

Lewis DEA, Gussin GN, Adhya S.

J Mol Biol. 2016 Nov 6;428(22):4438-4456. doi: 10.1016/j.jmb.2016.08.027. Epub 2016 Sep 24.


Infectious SIV resides in adipose tissue and induces metabolic defects in chronically infected rhesus macaques.

Couturier J, Agarwal N, Nehete PN, Baze WB, Barry MA, Jagannadha Sastry K, Balasubramanyam A, Lewis DE.

Retrovirology. 2016 Apr 27;13:30. doi: 10.1186/s12977-016-0260-2.


Frontal Sinus TASER Dart Injury.

Lewis MC, Lewis DE.

J Emerg Med. 2016 Mar;50(3):490-2. doi: 10.1016/j.jemermed.2015.09.024. Epub 2015 Oct 24. No abstract available.


Molecular Mechanisms of Transcription Initiation at gal Promoters and their Multi-Level Regulation by GalR, CRP and DNA Loop.

Lewis DE, Adhya S.

Biomolecules. 2015 Oct 16;5(4):2782-807. doi: 10.3390/biom5042782. Review.


Allele Specific Expression of MICA Variants in Human Fibroblasts Suggests a Pathogenic Mechanism.

Shi C, Li H, Couturier JP, Yang K, Guo X, He D, Lewis DE, Zhou X.

Open Rheumatol J. 2015 Aug 26;9:60-4. doi: 10.2174/1874312901409010060. eCollection 2015.


Intermuscular and perimuscular fat expansion in obesity correlates with skeletal muscle T cell and macrophage infiltration and insulin resistance.

Khan IM, Perrard XY, Brunner G, Lui H, Sparks LM, Smith SR, Wang X, Shi ZZ, Lewis DE, Wu H, Ballantyne CM.

Int J Obes (Lond). 2015 Nov;39(11):1607-18. doi: 10.1038/ijo.2015.104. Epub 2015 Jun 4.


Human adipose tissue as a reservoir for memory CD4+ T cells and HIV.

Couturier J, Suliburk JW, Brown JM, Luke DJ, Agarwal N, Yu X, Nguyen C, Iyer D, Kozinetz CA, Overbeek PA, Metzker ML, Balasubramanyam A, Lewis DE.

AIDS. 2015 Mar 27;29(6):667-74. doi: 10.1097/QAD.0000000000000599.


The effect of extracorporeal photopheresis alone or in combination therapy on circulating CD4(+) Foxp3(+) CD25(-) T cells in patients with leukemic cutaneous T-cell lymphoma.

Shiue LH, Couturier J, Lewis DE, Wei C, Ni X, Duvic M.

Photodermatol Photoimmunol Photomed. 2015 Jul;31(4):184-94. doi: 10.1111/phpp.12175. Epub 2015 Mar 28.


Mining the human complexome database identifies RBM14 as an XPO1-associated protein involved in HIV-1 Rev function.

Budhiraja S, Liu H, Couturier J, Malovannaya A, Qin J, Lewis DE, Rice AP.

J Virol. 2015 Apr;89(7):3557-67. doi: 10.1128/JVI.03232-14. Epub 2015 Jan 14.


Differential role of base pairs on gal promoters strength.

Lewis DEA, Le P, Adhya S.

J Mol Biol. 2015 Feb 27;427(4):792-806. doi: 10.1016/j.jmb.2014.12.010. Epub 2014 Dec 24.


Metagenomic assessment of the eastern oyster-associated microbiota.

Chauhan A, Wafula D, Lewis DE, Pathak A.

Genome Announc. 2014 Oct 23;2(5). pii: e01083-14. doi: 10.1128/genomeA.01083-14.


Granzyme B secretion by human memory CD4 T cells is less strictly regulated compared to memory CD8 T cells.

Lin L, Couturier J, Yu X, Medina MA, Kozinetz CA, Lewis DE.

BMC Immunol. 2014 Sep 24;15:36. doi: 10.1186/s12865-014-0036-1.


Overexpression of type VI collagen in neoplastic lung tissues.

Voiles L, Lewis DE, Han L, Lupov IP, Lin TL, Robertson MJ, Petrache I, Chang HC.

Oncol Rep. 2014 Nov;32(5):1897-904. doi: 10.3892/or.2014.3438. Epub 2014 Aug 22.


Effect of minimal/mild hearing loss on children's speech understanding in a simulated classroom.

Lewis DE, Valente DL, Spalding JL.

Ear Hear. 2015 Jan;36(1):136-44. doi: 10.1097/AUD.0000000000000092.


Activation of dendritic cell function by soypeptide lunasin as a novel vaccine adjuvant.

Tung CY, Lewis DE, Han L, Jaja M, Yao S, Li F, Robertson MJ, Zhou B, Sun J, Chang HC.

Vaccine. 2014 Sep 22;32(42):5411-9. doi: 10.1016/j.vaccine.2014.07.103. Epub 2014 Aug 12.


Children's understanding of instructions presented in noise and reverberation.

Lewis DE, Manninen CM, Valente DL, Smith NA.

Am J Audiol. 2014 Sep;23(3):326-36. doi: 10.1044/2014_AJA-14-0020.


HIV replication in conjunction with granzyme B production by CCR5+ memory CD4 T cells: Implications for bystander cell and tissue pathologies.

Couturier J, Hutchison AT, Medina MA, Gingaras C, Urvil P, Yu X, Nguyen C, Mahale P, Lin L, Kozinetz CA, Schmitz JE, Kimata JT, Savidge TC, Lewis DE.

Virology. 2014 Aug;462-463:175-88. doi: 10.1016/j.virol.2014.06.008. Epub 2014 Jul 4.


PMA induces SnoN proteolysis and CD61 expression through an autocrine mechanism.

Li C, Peart N, Xuan Z, Lewis DE, Xia Y, Jin J.

Cell Signal. 2014 Jul;26(7):1369-78. doi: 10.1016/j.cellsig.2014.03.006. Epub 2014 Mar 15.


HIV-1 Vpr induces adipose dysfunction in vivo through reciprocal effects on PPAR/GR co-regulation.

Agarwal N, Iyer D, Patel SG, Sekhar RV, Phillips TM, Schubert U, Oplt T, Buras ED, Samson SL, Couturier J, Lewis DE, Rodriguez-Barradas MC, Jahoor F, Kino T, Kopp JB, Balasubramanyam A.

Sci Transl Med. 2013 Nov 27;5(213):213ra164. doi: 10.1126/scitranslmed.3007148.


Disability, despotism, deoxygenation--from exile to Academy member: Nikolai Matveevich Kizhner.

Lewis DE.

Angew Chem Int Ed Engl. 2013 Nov 4;52(45):11704-12. doi: 10.1002/anie.201303165. Epub 2013 Oct 7. No abstract available.


The functional effects of color perception and color imagery.

Chang S, Lewis DE, Pearson J.

J Vis. 2013 Aug 6;13(10). pii: 4. doi: 10.1167/13.10.4.


CD25 and CD69 induction by α4β1 outside-in signalling requires TCR early signalling complex proteins.

Cimo AM, Ahmed Z, McIntyre BW, Lewis DE, Ladbury JE.

Biochem J. 2013 Aug 15;454(1):109-21. doi: 10.1042/BJ20130485.


The color "fruit": object memories defined by color.

Lewis DE, Pearson J, Khuu SK.

PLoS One. 2013 May 22;8(5):e64960. doi: 10.1371/journal.pone.0064960. Print 2013.


The heterocyclic ring of 4-substituted-1,8-naphthalimides is NOT inert to nucleophilic attack, contrary to earlier reports.

McKenney RK, Groess LL, Kopidlansky KM, Dunkle KL, Lewis DE.

Org Biomol Chem. 2013 Jul 14;11(26):4390-6. doi: 10.1039/c3ob40639c. Epub 2013 May 28.


Relationship of ethnicity and CD4 Count with glucose metabolism among HIV patients on Highly-Active Antiretroviral Therapy (HAART).

Misra R, Chandra P, Riechman SE, Long DM, Shinde S, Pownall HJ, Coraza I, Lewis DE, Sekhar RV, Balasubramanyam A.

BMC Endocr Disord. 2013 Apr 22;13:13. doi: 10.1186/1472-6823-13-13.


Can serum surfactant protein D or CC-chemokine ligand 18 predict outcome of interstitial lung disease in patients with early systemic sclerosis?

Elhaj M, Charles J, Pedroza C, Liu X, Zhou X, Estrada-Y-Martin RM, Gonzalez EB, Lewis DE, Draeger HT, Kim S, Arnett FC, Mayes MD, Assassi S.

J Rheumatol. 2013 Jul;40(7):1114-20. doi: 10.3899/jrheum.120997. Epub 2013 Apr 15.


Aqp2-expressing cells give rise to renal intercalated cells.

Wu H, Chen L, Zhou Q, Zhang X, Berger S, Bi J, Lewis DE, Xia Y, Zhang W.

J Am Soc Nephrol. 2013 Feb;24(2):243-52. doi: 10.1681/ASN.2012080866. Epub 2013 Jan 10.


Specific contacts of the -35 region of the galP1 promoter by RNA polymerase inhibit GalR-mediated DNA looping repression.

Csiszovszki Z, Lewis DE, Le P, Sneppen K, Semsey S.

Nucleic Acids Res. 2012 Nov 1;40(20):10064-72. doi: 10.1093/nar/gks796. Epub 2012 Aug 31.


Sweat the small stuff.

Lewis DE.

Cytometry A. 2012 Nov;81(11):933-4. doi: 10.1002/cyto.a.22159. Epub 2012 Aug 15. No abstract available.

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