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Items: 1 to 50 of 68

1.

A brief from the leaf: latest research to inform our understanding of the phyllosphere microbiome.

Leveau JH.

Curr Opin Microbiol. 2019 Jun;49:41-49. doi: 10.1016/j.mib.2019.10.002. Epub 2019 Nov 7. Review.

PMID:
31707206
2.

Abundance, diversity and plant-specific adaptations of plant-associated lactic acid bacteria.

Yu AO, Leveau JHJ, Marco ML.

Environ Microbiol Rep. 2020 Feb;12(1):16-29. doi: 10.1111/1758-2229.12794. Epub 2019 Oct 28. Review.

PMID:
31573142
3.

An roGFP2-Based Bacterial Bioreporter for Redox Sensing of Plant Surfaces.

Liu TH, Yaghmour MA, Lee MH, Gradziel TM, Leveau JHJ, Bostock RM.

Phytopathology. 2020 Feb;110(2):297-308. doi: 10.1094/PHYTO-07-19-0237-R. Epub 2019 Dec 16.

PMID:
31483224
4.

Metabolome and Microbiome Signatures in the Roots of Citrus Affected by Huanglongbing.

Padhi EMT, Maharaj N, Lin SY, Mishchuk DO, Chin E, Godfrey K, Foster E, Polek M, Leveau JHJ, Slupsky CM.

Phytopathology. 2019 Dec;109(12):2022-2032. doi: 10.1094/PHYTO-03-19-0103-R. Epub 2019 Nov 8.

PMID:
31433274
5.

Finished Genome Sequence of the Indole-3-Acetic Acid-Catabolizing Bacterium Pseudomonas putida 1290.

Laird TS, Leveau JHJ.

Microbiol Resour Announc. 2019 Jul 11;8(28). pii: e00519-19. doi: 10.1128/MRA.00519-19.

6.

Persistence of Fusarium oxysporum f. sp. fragariae in Soil Through Asymptomatic Colonization of Rotation Crops.

Henry PM, Pastrana AM, Leveau JHJ, Gordon TR.

Phytopathology. 2019 May;109(5):770-779. doi: 10.1094/PHYTO-11-18-0418-R. Epub 2019 Apr 4.

PMID:
30644330
7.

Editorial: The Individual Microbe: Single-Cell Analysis and Agent-Based Modelling.

Leveau JHJ, Hellweger FL, Kreft JU, Prats C, Zhang W.

Front Microbiol. 2018 Nov 21;9:2825. doi: 10.3389/fmicb.2018.02825. eCollection 2018. No abstract available.

8.

iac Gene Expression in the Indole-3-Acetic Acid-Degrading Soil Bacterium Enterobacter soli LF7.

Greenhut IV, Slezak BL, Leveau JHJ.

Appl Environ Microbiol. 2018 Sep 17;84(19). pii: e01057-18. doi: 10.1128/AEM.01057-18. Print 2018 Oct 1.

9.

Impact of soil pedogenesis on the diversity and composition of fungal communities across the California soil chronosequence of Mendocino.

Courty PE, Buée M, Tech JJT, Brulé D, Colin Y, Leveau JHJ, Uroz S.

Mycorrhiza. 2018 May;28(4):343-356. doi: 10.1007/s00572-018-0829-9. Epub 2018 Mar 25.

PMID:
29574496
10.

From Genes to Ecosystems in Microbiology: Modeling Approaches and the Importance of Individuality.

Kreft JU, Plugge CM, Prats C, Leveau JHJ, Zhang W, Hellweger FL.

Front Microbiol. 2017 Nov 27;8:2299. doi: 10.3389/fmicb.2017.02299. eCollection 2017. Review.

11.

Finished Genome Sequences of Xanthomonas fragariae, the Cause of Bacterial Angular Leaf Spot of Strawberry.

Henry PM, Leveau JH.

Genome Announc. 2016 Nov 10;4(6). pii: e01271-16. doi: 10.1128/genomeA.01271-16.

12.

Inhibition of Xanthomonas fragariae, Causative Agent of Angular Leaf Spot of Strawberry, through Iron Deprivation.

Henry PM, Gebben SJ, Tech JJ, Yip JL, Leveau JH.

Front Microbiol. 2016 Oct 13;7:1589. eCollection 2016.

13.

Symplasmata are a clonal, conditional, and reversible type of bacterial multicellularity.

Tecon R, Leveau JH.

Sci Rep. 2016 Aug 18;6:31914. doi: 10.1038/srep31914.

14.

Specific impacts of beech and Norway spruce on the structure and diversity of the rhizosphere and soil microbial communities.

Uroz S, Oger P, Tisserand E, Cébron A, Turpault MP, Buée M, De Boer W, Leveau JH, Frey-Klett P.

Sci Rep. 2016 Jun 15;6:27756. doi: 10.1038/srep27756.

15.

Modeling microbial growth and dynamics.

Esser DS, Leveau JH, Meyer KM.

Appl Microbiol Biotechnol. 2015 Nov;99(21):8831-46. doi: 10.1007/s00253-015-6877-6. Epub 2015 Aug 23. Review.

PMID:
26298697
16.

Artificial Surfaces in Phyllosphere Microbiology.

Doan HK, Leveau JH.

Phytopathology. 2015 Aug;105(8):1036-42. doi: 10.1094/PHYTO-02-15-0050-RVW. Epub 2015 Jul 29. Review.

17.

Spatial scales of interactions among bacteria and between bacteria and the leaf surface.

Esser DS, Leveau JH, Meyer KM, Wiegand K.

FEMS Microbiol Ecol. 2015 Mar;91(3). pii: fiu034. doi: 10.1093/femsec/fiu034. Epub 2014 Dec 24.

18.

Finished Genome Sequence of Collimonas arenae Cal35.

Wu JJ, de Jager VC, Deng WL, Leveau JH.

Genome Announc. 2015 Jan 8;3(1). pii: e01408-14. doi: 10.1128/genomeA.01408-14.

19.

Biosynthetic genes and activity spectrum of antifungal polyynes from Collimonas fungivorans Ter331.

Fritsche K, van den Berg M, de Boer W, van Beek TA, Raaijmakers JM, van Veen JA, Leveau JH.

Environ Microbiol. 2014 May;16(5):1334-45. doi: 10.1111/1462-2920.12440. Epub 2014 Mar 27.

PMID:
24588891
20.

Transcriptional profiling of Gram-positive Arthrobacter in the phyllosphere: induction of pollutant degradation genes by natural plant phenolic compounds.

Scheublin TR, Deusch S, Moreno-Forero SK, Müller JA, van der Meer JR, Leveau JH.

Environ Microbiol. 2014 Jul;16(7):2212-25. doi: 10.1111/1462-2920.12375. Epub 2014 Jan 23.

PMID:
24373130
21.

Mighty small: Observing and modeling individual microbes becomes big science.

Kreft JU, Plugge CM, Grimm V, Prats C, Leveau JH, Banitz T, Baines S, Clark J, Ros A, Klapper I, Topping CJ, Field AJ, Schuler A, Litchman E, Hellweger FL.

Proc Natl Acad Sci U S A. 2013 Nov 5;110(45):18027-8. doi: 10.1073/pnas.1317472110. No abstract available.

22.

Explaining bacterial dispersion on leaf surfaces with an individual-based model (PHYLLOSIM).

van der Wal A, Tecon R, Kreft JU, Mooij WM, Leveau JH.

PLoS One. 2013 Oct 4;8(10):e75633. doi: 10.1371/journal.pone.0075633. eCollection 2013.

23.

Effects of indole-3-acetic acid on the transcriptional activities and stress tolerance of Bradyrhizobium japonicum.

Donati AJ, Lee HI, Leveau JH, Chang WS.

PLoS One. 2013 Oct 2;8(10):e76559. doi: 10.1371/journal.pone.0076559. eCollection 2013.

24.

New insights into the structure and function of phyllosphere microbiota through high-throughput molecular approaches.

Rastogi G, Coaker GL, Leveau JH.

FEMS Microbiol Lett. 2013 Nov;348(1):1-10. doi: 10.1111/1574-6968.12225. Epub 2013 Aug 13. Review.

25.

Functional characterization of the bacterial iac genes for degradation of the plant hormone indole-3-acetic acid.

Scott JC, Greenhut IV, Leveau JH.

J Chem Ecol. 2013 Jul;39(7):942-51. doi: 10.1007/s10886-013-0324-x. Epub 2013 Jul 24.

PMID:
23881445
26.

Comparative genomics of bacteria from the genus Collimonas: linking (dis)similarities in gene content to phenotypic variation and conservation.

Mela F, Fritsche K, de Boer W, van den Berg M, van Veen JA, Maharaj NN, Leveau JH.

Environ Microbiol Rep. 2012 Aug;4(4):424-32. doi: 10.1111/j.1758-2229.2012.00336.x. Epub 2012 Mar 19.

PMID:
23760828
27.

Single-cell versus population-level reproductive success of bacterial immigrants to pre-colonized leaf surfaces.

Remus-Emsermann MN, Kowalchuk GA, Leveau JH.

Environ Microbiol Rep. 2013 Jun;5(3):387-92. doi: 10.1111/1758-2229.12040. Epub 2013 Feb 25.

PMID:
23754719
28.

Draft Genome Sequence of the Phyllosphere Model Bacterium Pantoea agglomerans 299R.

Remus-Emsermann MN, Kim EB, Marco ML, Tecon R, Leveau JH.

Genome Announc. 2013 Jan;1(1). pii: e00036-13. doi: 10.1128/genomeA.00036-13. Epub 2013 Feb 28.

29.

Isolation of Arthrobacter species from the phyllosphere and demonstration of their epiphytic fitness.

Scheublin TR, Leveau JH.

Microbiologyopen. 2013 Feb;2(1):205-13. doi: 10.1002/mbo3.59. Epub 2013 Jan 28.

30.

Leaf microbiota in an agroecosystem: spatiotemporal variation in bacterial community composition on field-grown lettuce.

Rastogi G, Sbodio A, Tech JJ, Suslow TV, Coaker GL, Leveau JH.

ISME J. 2012 Oct;6(10):1812-22. doi: 10.1038/ismej.2012.32. Epub 2012 Apr 26.

31.

The mechanics of bacterial cluster formation on plant leaf surfaces as revealed by bioreporter technology.

Tecon R, Leveau JH.

Environ Microbiol. 2012 May;14(5):1325-32. doi: 10.1111/j.1462-2920.2012.02715.x. Epub 2012 Feb 24.

PMID:
22364368
32.

Variation in local carrying capacity and the individual fate of bacterial colonizers in the phyllosphere.

Remus-Emsermann MN, Tecon R, Kowalchuk GA, Leveau JH.

ISME J. 2012 Apr;6(4):756-65. doi: 10.1038/ismej.2011.209. Epub 2012 Jan 19.

33.

Quantification of lateral heterogeneity in carbohydrate permeability of isolated plant leaf cuticles.

Remus-Emsermann MN, de Oliveira S, Schreiber L, Leveau JH.

Front Microbiol. 2011 Sep 29;2:197. doi: 10.3389/fmicb.2011.00197. eCollection 2011.

34.

Microbiology of the phyllosphere: a playground for testing ecological concepts.

Meyer KM, Leveau JH.

Oecologia. 2012 Mar;168(3):621-9. doi: 10.1007/s00442-011-2138-2. Epub 2011 Oct 5. Review.

35.

Dual transcriptional profiling of a bacterial/fungal confrontation: Collimonas fungivorans versus Aspergillus niger.

Mela F, Fritsche K, de Boer W, van Veen JA, de Graaff LH, van den Berg M, Leveau JH.

ISME J. 2011 Sep;5(9):1494-504. doi: 10.1038/ismej.2011.29. Epub 2011 May 26.

36.

Modelling sugar diffusion across plant leaf cuticles: the effect of free water on substrate availability to phyllosphere bacteria.

van der Wal A, Leveau JH.

Environ Microbiol. 2011 Mar;13(3):792-7. doi: 10.1111/j.1462-2920.2010.02382.x. Epub 2010 Nov 22.

PMID:
21091864
37.

Understanding the physiology of Lactobacillus plantarum at zero growth.

Goffin P, van de Bunt B, Giovane M, Leveau JH, Höppener-Ogawa S, Teusink B, Hugenholtz J.

Mol Syst Biol. 2010 Sep 21;6:413. doi: 10.1038/msb.2010.67.

38.

A PCR-based toolbox for the culture-independent quantification of total bacterial abundances in plant environments.

Rastogi G, Tech JJ, Coaker GL, Leveau JH.

J Microbiol Methods. 2010 Nov;83(2):127-32. doi: 10.1016/j.mimet.2010.08.006. Epub 2010 Sep 15.

PMID:
20816905
39.

Linking environmental heterogeneity and reproductive success at single-cell resolution.

Remus-Emsermann MN, Leveau JH.

ISME J. 2010 Feb;4(2):215-22. doi: 10.1038/ismej.2009.110. Epub 2009 Oct 29.

PMID:
19865185
40.

The bacterial genus Collimonas: mycophagy, weathering and other adaptive solutions to life in oligotrophic soil environments.

Leveau JH, Uroz S, de Boer W.

Environ Microbiol. 2010 Feb;12(2):281-92. doi: 10.1111/j.1462-2920.2009.02010.x. Epub 2009 Jul 22. Review.

PMID:
19638176
41.

Plant pathology: a story about biology.

Gordon TR, Leveau JH.

Annu Rev Phytopathol. 2010;48:293-309. doi: 10.1146/annurev-phyto-080508-081919. Review.

PMID:
19400651
42.

Impact of Collimonas bacteria on community composition of soil fungi.

Höppener-Ogawa S, Leveau JH, Hundscheid MP, van Veen JA, de Boer W.

Environ Microbiol. 2009 Jun;11(6):1444-52. doi: 10.1111/j.1462-2920.2009.01872.x. Epub 2009 Mar 2.

PMID:
19260938
43.

Mycophagous growth of Collimonas bacteria in natural soils, impact on fungal biomass turnover and interactions with mycophagous Trichoderma fungi.

Höppener-Ogawa S, Leveau JH, van Veen JA, De Boer W.

ISME J. 2009 Feb;3(2):190-8. doi: 10.1038/ismej.2008.97. Epub 2008 Oct 16.

PMID:
18923455
44.

Identification and characterization of genes underlying chitinolysis in Collimonas fungivorans Ter331.

Fritsche K, de Boer W, Gerards S, van den Berg M, van Veen JA, Leveau JH.

FEMS Microbiol Ecol. 2008 Oct;66(1):123-35. doi: 10.1111/j.1574-6941.2008.00547.x. Epub 2008 Jul 30.

45.

Comparative genomics of the pIPO2/pSB102 family of environmental plasmids: sequence, evolution, and ecology of pTer331 isolated from Collimonas fungivorans Ter331.

Mela F, Fritsche K, Boersma H, van Elsas JD, Bartels D, Meyer F, de Boer W, van Veen JA, Leveau JH.

FEMS Microbiol Ecol. 2008 Oct;66(1):45-62. doi: 10.1111/j.1574-6941.2008.00472.x. Epub 2008 Mar 19.

46.

Collimonas arenae sp. nov. and Collimonas pratensis sp. nov., isolated from (semi-)natural grassland soils.

Höppener-Ogawa S, de Boer W, Leveau JH, van Veen JA, de Brandt E, Vanlaere E, Sutton H, Dare DJ, Vandamme P.

Int J Syst Evol Microbiol. 2008 Feb;58(Pt 2):414-9. doi: 10.1099/ijs.0.65375-0.

PMID:
18218941
47.

Discovery of a bacterial gene cluster for catabolism of the plant hormone indole 3-acetic acid.

Leveau JH, Gerards S.

FEMS Microbiol Ecol. 2008 Aug;65(2):238-50. doi: 10.1111/j.1574-6941.2008.00436.x. Epub 2008 Jan 18.

48.

Bacterial mycophagy: definition and diagnosis of a unique bacterial-fungal interaction.

Leveau JH, Preston GM.

New Phytol. 2008;177(4):859-76. Epub 2007 Dec 12. Review.

49.

Collimonas fungivorans, an unpredicted in vitro but efficient in vivo biocontrol agent for the suppression of tomato foot and root rot.

Kamilova F, Leveau JH, Lugtenberg B.

Environ Microbiol. 2007 Jun;9(6):1597-603. Erratum in: Environ Microbiol. 2007 Jul;9(7):1868.

PMID:
17504497
50.

Specific detection and real-time PCR quantification of potentially mycophagous bacteria belonging to the genus Collimonas in different soil ecosystems.

Höppener-Ogawa S, Leveau JH, Smant W, van Veen JA, de Boer W.

Appl Environ Microbiol. 2007 Jul;73(13):4191-7. Epub 2007 May 4.

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