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Items: 1 to 50 of 81

1.

Adenosine-to-Inosine RNA Editing Within Corticolimbic Brain Regions Is Regulated in Response to Chronic Social Defeat Stress in Mice.

Dick ALW, Khermesh K, Paul E, Stamp F, Levanon EY, Chen A.

Front Psychiatry. 2019 Apr 26;10:277. doi: 10.3389/fpsyt.2019.00277. eCollection 2019.

2.

Specific inhibition of splicing factor activity by decoy RNA oligonucleotides.

Denichenko P, Mogilevsky M, Cléry A, Welte T, Biran J, Shimshon O, Barnabas GD, Danan-Gotthold M, Kumar S, Yavin E, Levanon EY, Allain FH, Geiger T, Levkowitz G, Karni R.

Nat Commun. 2019 Apr 8;10(1):1590. doi: 10.1038/s41467-019-09523-0.

3.

RNA editing is abundant and correlates with task performance in a social bumblebee.

Porath HT, Hazan E, Shpigler H, Cohen M, Band M, Ben-Shahar Y, Levanon EY, Eisenberg E, Bloch G.

Nat Commun. 2019 Apr 8;10(1):1605. doi: 10.1038/s41467-019-09543-w.

4.

Identification of ADAR1 adenosine deaminase dependency in a subset of cancer cells.

Gannon HS, Zou T, Kiessling MK, Gao GF, Cai D, Choi PS, Ivan AP, Buchumenski I, Berger AC, Goldstein JT, Cherniack AD, Vazquez F, Tsherniak A, Levanon EY, Hahn WC, Meyerson M.

Nat Commun. 2018 Dec 21;9(1):5450. doi: 10.1038/s41467-018-07824-4.

5.

Loss of ADAR1 in tumours overcomes resistance to immune checkpoint blockade.

Ishizuka JJ, Manguso RT, Cheruiyot CK, Bi K, Panda A, Iracheta-Vellve A, Miller BC, Du PP, Yates KB, Dubrot J, Buchumenski I, Comstock DE, Brown FD, Ayer A, Kohnle IC, Pope HW, Zimmer MD, Sen DR, Lane-Reticker SK, Robitschek EJ, Griffin GK, Collins NB, Long AH, Doench JG, Kozono D, Levanon EY, Haining WN.

Nature. 2019 Jan;565(7737):43-48. doi: 10.1038/s41586-018-0768-9. Epub 2018 Dec 17.

PMID:
30559380
6.

Computational approaches for detection and quantification of A-to-I RNA-editing.

Pinto Y, Levanon EY.

Methods. 2019 Mar 1;156:25-31. doi: 10.1016/j.ymeth.2018.11.011. Epub 2018 Nov 20. Review.

PMID:
30465820
7.

RNA editing of Filamin A pre-mRNA regulates vascular contraction and diastolic blood pressure.

Jain M, Mann TD, Stulić M, Rao SP, Kirsch A, Pullirsch D, Strobl X, Rath C, Reissig L, Moreth K, Klein-Rodewald T, Bekeredjian R, Gailus-Durner V, Fuchs H, Hrabě de Angelis M, Pablik E, Cimatti L, Martin D, Zinnanti J, Graier WF, Sibilia M, Frank S, Levanon EY, Jantsch MF.

EMBO J. 2018 Oct 1;37(19). pii: e94813. doi: 10.15252/embj.201694813. Epub 2018 Aug 7.

8.

A-to-I RNA Editing: An Overlooked Source of Cancer Mutations.

Ben-Aroya S, Levanon EY.

Cancer Cell. 2018 May 14;33(5):789-790. doi: 10.1016/j.ccell.2018.04.006.

9.

A-to-I RNA editing - immune protector and transcriptome diversifier.

Eisenberg E, Levanon EY.

Nat Rev Genet. 2018 Aug;19(8):473-490. doi: 10.1038/s41576-018-0006-1. Review.

PMID:
29692414
10.

Increased RNA Editing May Provide a Source for Autoantigens in Systemic Lupus Erythematosus.

Roth SH, Danan-Gotthold M, Ben-Izhak M, Rechavi G, Cohen CJ, Louzoun Y, Levanon EY.

Cell Rep. 2018 Apr 3;23(1):50-57. doi: 10.1016/j.celrep.2018.03.036.

11.

Decreased A-to-I RNA editing as a source of keratinocytes' dsRNA in psoriasis.

Shallev L, Kopel E, Feiglin A, Leichner GS, Avni D, Sidi Y, Eisenberg E, Barzilai A, Levanon EY, Greenberger S.

RNA. 2018 Jun;24(6):828-840. doi: 10.1261/rna.064659.117. Epub 2018 Mar 28.

12.

ROP: dumpster diving in RNA-sequencing to find the source of 1 trillion reads across diverse adult human tissues.

Mangul S, Yang HT, Strauli N, Gruhl F, Porath HT, Hsieh K, Chen L, Daley T, Christenson S, Wesolowska-Andersen A, Spreafico R, Rios C, Eng C, Smith AD, Hernandez RD, Ophoff RA, Santana JR, Levanon EY, Woodruff PG, Burchard E, Seibold MA, Shifman S, Eskin E, Zaitlen N.

Genome Biol. 2018 Feb 15;19(1):36. doi: 10.1186/s13059-018-1403-7.

13.

Whole-genome sequencing reveals principles of brain retrotransposition in neurodevelopmental disorders.

Jacob-Hirsch J, Eyal E, Knisbacher BA, Roth J, Cesarkas K, Dor C, Farage-Barhom S, Kunik V, Simon AJ, Gal M, Yalon M, Moshitch-Moshkovitz S, Tearle R, Constantini S, Levanon EY, Amariglio N, Rechavi G.

Cell Res. 2018 Feb;28(2):187-203. doi: 10.1038/cr.2018.8. Epub 2018 Jan 12.

14.

Human cancer tissues exhibit reduced A-to-I editing of miRNAs coupled with elevated editing of their targets.

Pinto Y, Buchumenski I, Levanon EY, Eisenberg E.

Nucleic Acids Res. 2018 Jan 9;46(1):71-82. doi: 10.1093/nar/gkx1176.

15.

RNA editing by ADAR1 leads to context-dependent transcriptome-wide changes in RNA secondary structure.

Solomon O, Di Segni A, Cesarkas K, Porath HT, Marcu-Malina V, Mizrahi O, Stern-Ginossar N, Kol N, Farage-Barhom S, Glick-Saar E, Lerenthal Y, Levanon EY, Amariglio N, Unger R, Goldstein I, Eyal E, Rechavi G.

Nat Commun. 2017 Nov 13;8(1):1440. doi: 10.1038/s41467-017-01458-8.

16.

Promoting RNA editing by ADAR attraction.

Danan-Gotthold M, Levanon EY.

Genome Biol. 2017 Oct 23;18(1):196. doi: 10.1186/s13059-017-1343-7.

17.

Integrating networks and comparative genomics reveals retroelement proliferation dynamics in hominid genomes.

Levy O, Knisbacher BA, Levanon EY, Havlin S.

Sci Adv. 2017 Oct 13;3(10):e1701256. doi: 10.1126/sciadv.1701256. eCollection 2017 Oct.

18.

Massive A-to-I RNA editing is common across the Metazoa and correlates with dsRNA abundance.

Porath HT, Knisbacher BA, Eisenberg E, Levanon EY.

Genome Biol. 2017 Oct 2;18(1):185. doi: 10.1186/s13059-017-1315-y.

19.

Dynamic hyper-editing underlies temperature adaptation in Drosophila.

Buchumenski I, Bartok O, Ashwal-Fluss R, Pandey V, Porath HT, Levanon EY, Kadener S.

PLoS Genet. 2017 Jul 26;13(7):e1006931. doi: 10.1371/journal.pgen.1006931. eCollection 2017 Jul.

20.

A-to-I RNA Editing in the Earliest-Diverging Eumetazoan Phyla.

Porath HT, Schaffer AA, Kaniewska P, Alon S, Eisenberg E, Rosenthal J, Levanon EY, Levy O.

Mol Biol Evol. 2017 Aug 1;34(8):1890-1901. doi: 10.1093/molbev/msx125.

21.

Trade-off between Transcriptome Plasticity and Genome Evolution in Cephalopods.

Liscovitch-Brauer N, Alon S, Porath HT, Elstein B, Unger R, Ziv T, Admon A, Levanon EY, Rosenthal JJC, Eisenberg E.

Cell. 2017 Apr 6;169(2):191-202.e11. doi: 10.1016/j.cell.2017.03.025.

22.

Abnormalities in A-to-I RNA editing patterns in CNS injuries correlate with dynamic changes in cell type composition.

Gal-Mark N, Shallev L, Sweetat S, Barak M, Billy Li J, Levanon EY, Eisenberg E, Behar O.

Sci Rep. 2017 Mar 7;7:43421. doi: 10.1038/srep43421.

23.

Control and automation of multilayered integrated microfluidic device fabrication.

Kipper S, Frolov L, Guy O, Pellach M, Glick Y, Malichi A, Knisbacher BA, Barbiro-Michaely E, Avrahami D, Yavets-Chen Y, Levanon EY, Gerber D.

Lab Chip. 2017 Jan 31;17(3):557-566. doi: 10.1039/c6lc01534d.

PMID:
28102868
24.

Extensive RNA editing and splicing increase immune self-representation diversity in medullary thymic epithelial cells.

Danan-Gotthold M, Guyon C, Giraud M, Levanon EY, Abramson J.

Genome Biol. 2016 Oct 24;17(1):219.

25.

Transcriptome, genetic editing, and microRNA divergence substantiate sympatric speciation of blind mole rat, Spalax.

Li K, Wang L, Knisbacher BA, Xu Q, Levanon EY, Wang H, Frenkel-Morgenstern M, Tagore S, Fang X, Bazak L, Buchumenski I, Zhao Y, Lövy M, Li X, Han L, Frenkel Z, Beiles A, Cao YB, Wang ZL, Nevo E.

Proc Natl Acad Sci U S A. 2016 Jul 5;113(27):7584-9. doi: 10.1073/pnas.1607497113. Epub 2016 Jun 23.

26.

Expanding preconception carrier screening for the Jewish population using high throughput microfluidics technology and next generation sequencing.

Gal M, Khermesh K, Barak M, Lin M, Lahat H, Reznik Wolf H, Lin M, Pras E, Levanon EY.

BMC Med Genomics. 2016 May 13;9(1):24. doi: 10.1186/s12920-016-0184-7.

27.

Clustered mutations in hominid genome evolution are consistent with APOBEC3G enzymatic activity.

Pinto Y, Gabay O, Arbiza L, Sams AJ, Keinan A, Levanon EY.

Genome Res. 2016 May;26(5):579-87. doi: 10.1101/gr.199240.115. Epub 2016 Apr 7.

28.

Activation-Induced Cytidine Deaminase Links Ovulation-Induced Inflammation and Serous Carcinogenesis.

Sapoznik S, Bahar-Shany K, Brand H, Pinto Y, Gabay O, Glick-Saar E, Dor C, Zadok O, Barshack I, Zundelevich A, Gal-Yam EN, Yung Y, Hourvitz A, Korach J, Beiner M, Jacob J, Levanon EY, Barak M, Aviel-Ronen S, Levanon K.

Neoplasia. 2016 Feb;18(2):90-9. doi: 10.1016/j.neo.2015.12.003.

29.

A novel homozygous splice site mutation in NALCN identified in siblings with cachexia, strabismus, severe intellectual disability, epilepsy and abnormal respiratory rhythm.

Gal M, Magen D, Zahran Y, Ravid S, Eran A, Khayat M, Gafni C, Levanon EY, Mandel H.

Eur J Med Genet. 2016 Apr;59(4):204-9. doi: 10.1016/j.ejmg.2016.02.007. Epub 2016 Feb 23.

PMID:
26923739
30.

Reduced levels of protein recoding by A-to-I RNA editing in Alzheimer's disease.

Khermesh K, D'Erchia AM, Barak M, Annese A, Wachtel C, Levanon EY, Picardi E, Eisenberg E.

RNA. 2016 Feb;22(2):290-302. doi: 10.1261/rna.054627.115. Epub 2015 Dec 11.

31.

Fmrp Interacts with Adar and Regulates RNA Editing, Synaptic Density and Locomotor Activity in Zebrafish.

Shamay-Ramot A, Khermesh K, Porath HT, Barak M, Pinto Y, Wachtel C, Zilberberg A, Lerer-Goldshtein T, Efroni S, Levanon EY, Appelbaum L.

PLoS Genet. 2015 Dec 4;11(12):e1005702. doi: 10.1371/journal.pgen.1005702. eCollection 2015 Dec.

32.

DNA Editing by APOBECs: A Genomic Preserver and Transformer.

Knisbacher BA, Gerber D, Levanon EY.

Trends Genet. 2016 Jan;32(1):16-28. doi: 10.1016/j.tig.2015.10.005. Epub 2015 Nov 20. Review.

PMID:
26608778
33.

DNA Editing of LTR Retrotransposons Reveals the Impact of APOBECs on Vertebrate Genomes.

Knisbacher BA, Levanon EY.

Mol Biol Evol. 2016 Feb;33(2):554-67. doi: 10.1093/molbev/msv239. Epub 2015 Nov 4.

34.

Elevated RNA Editing Activity Is a Major Contributor to Transcriptomic Diversity in Tumors.

Paz-Yaacov N, Bazak L, Buchumenski I, Porath HT, Danan-Gotthold M, Knisbacher BA, Eisenberg E, Levanon EY.

Cell Rep. 2015 Oct 13;13(2):267-76. doi: 10.1016/j.celrep.2015.08.080. Epub 2015 Oct 1.

35.

Corrigendum: Genome-wide adaptive complexes to underground stresses in blind mole rats Spalax.

Fang X, Nevo E, Han L, Levanon EY, Zhao J, Avivi A, Larkin D, Jiang X, Feranchuk S, Zhu Y, Fishman A, Feng Y, Sher N, Xiong Z, Hankeln T, Huang Z, Gorbunova V, Zhang L, Zhao W, Wildman DE, Xiong Y, Gudkov A, Zheng Q, Rechavi G, Liu S, Bazak L, Chen J, Knisbacher BA, Lu Y, Shams I, Gajda K, Farré M, Kim J, Lewin HA, Ma J, Band M, Bicker A, Kranz A, Mattheus T, Schmidt H, Seluanov A, Azpurua J, McGowen MR, Ben Jacob E, Li K, Peng S, Zhu X, Liao X, Li S, Krogh A, Zhou X, Brodsky L, Wang J.

Nat Commun. 2015 Aug 12;6:8051. doi: 10.1038/ncomms9051. No abstract available.

PMID:
26264976
36.

Identification of recurrent regulated alternative splicing events across human solid tumors.

Danan-Gotthold M, Golan-Gerstl R, Eisenberg E, Meir K, Karni R, Levanon EY.

Nucleic Acids Res. 2015 May 26;43(10):5130-44. doi: 10.1093/nar/gkv210. Epub 2015 Apr 23.

37.

DNA and RNA editing of retrotransposons accelerate mammalian genome evolution.

Knisbacher BA, Levanon EY.

Ann N Y Acad Sci. 2015 Apr;1341:115-25. doi: 10.1111/nyas.12713. Epub 2015 Feb 26.

PMID:
25722083
38.

Positive correlation between ADAR expression and its targets suggests a complex regulation mediated by RNA editing in the human brain.

Liscovitch N, Bazak L, Levanon EY, Chechik G.

RNA Biol. 2014;11(11):1447-56. doi: 10.4161/15476286.2014.992286.

39.

The majority of transcripts in the squid nervous system are extensively recoded by A-to-I RNA editing.

Alon S, Garrett SC, Levanon EY, Olson S, Graveley BR, Rosenthal JJ, Eisenberg E.

Elife. 2015 Jan 8;4. doi: 10.7554/eLife.05198.

40.

Stem cells. m6A mRNA methylation facilitates resolution of naïve pluripotency toward differentiation.

Geula S, Moshitch-Moshkovitz S, Dominissini D, Mansour AA, Kol N, Salmon-Divon M, Hershkovitz V, Peer E, Mor N, Manor YS, Ben-Haim MS, Eyal E, Yunger S, Pinto Y, Jaitin DA, Viukov S, Rais Y, Krupalnik V, Chomsky E, Zerbib M, Maza I, Rechavi Y, Massarwa R, Hanna S, Amit I, Levanon EY, Amariglio N, Stern-Ginossar N, Novershtern N, Rechavi G, Hanna JH.

Science. 2015 Feb 27;347(6225):1002-6. doi: 10.1126/science.1261417. Epub 2015 Jan 1.

41.

Analysis of intron sequences reveals hallmarks of circular RNA biogenesis in animals.

Ivanov A, Memczak S, Wyler E, Torti F, Porath HT, Orejuela MR, Piechotta M, Levanon EY, Landthaler M, Dieterich C, Rajewsky N.

Cell Rep. 2015 Jan 13;10(2):170-7. doi: 10.1016/j.celrep.2014.12.019. Epub 2014 Dec 31.

42.

Does RNA editing compensate for Alu invasion of the primate genome?

Levanon EY, Eisenberg E.

Bioessays. 2015 Feb;37(2):175-81. doi: 10.1002/bies.201400163. Epub 2014 Oct 31.

PMID:
25363891
43.

Novel mutation in TSPAN12 leads to autosomal recessive inheritance of congenital vitreoretinal disease with intra-familial phenotypic variability.

Gal M, Levanon EY, Hujeirat Y, Khayat M, Pe'er J, Shalev S.

Am J Med Genet A. 2014 Dec;164A(12):2996-3002. doi: 10.1002/ajmg.a.36739. Epub 2014 Sep 22.

PMID:
25250762
44.

A genome-wide map of hyper-edited RNA reveals numerous new sites.

Porath HT, Carmi S, Levanon EY.

Nat Commun. 2014 Aug 27;5:4726. doi: 10.1038/ncomms5726.

45.

Characterizing of functional human coding RNA editing from evolutionary, structural, and dynamic perspectives.

Solomon O, Bazak L, Levanon EY, Amariglio N, Unger R, Rechavi G, Eyal E.

Proteins. 2014 Nov;82(11):3117-31. doi: 10.1002/prot.24672. Epub 2014 Sep 3.

PMID:
25136968
46.

Genome-wide adaptive complexes to underground stresses in blind mole rats Spalax.

Fang X, Nevo E, Han L, Levanon EY, Zhao J, Avivi A, Larkin D, Jiang X, Feranchuk S, Zhu Y, Fishman A, Feng Y, Sher N, Xiong Z, Hankeln T, Huang Z, Gorbunova V, Zhang L, Zhao W, Wildman DE, Xiong Y, Gudkov A, Zheng Q, Rechavi G, Liu S, Bazak L, Chen J, Knisbacher BA, Lu Y, Shams I, Gajda K, Farré M, Kim J, Lewin HA, Ma J, Band M, Bicker A, Kranz A, Mattheus T, Schmidt H, Seluanov A, Azpurua J, McGowen MR, Ben Jacob E, Li K, Peng S, Zhu X, Liao X, Li S, Krogh A, Zhou X, Brodsky L, Wang J.

Nat Commun. 2014 Jun 3;5:3966. doi: 10.1038/ncomms4966. Erratum in: Nat Commun. 2015;6:8051.

PMID:
24892994
47.

Genome-wide analysis of Alu editability.

Bazak L, Levanon EY, Eisenberg E.

Nucleic Acids Res. 2014 Jun;42(11):6876-84. doi: 10.1093/nar/gku414. Epub 2014 May 14.

48.

Mammalian conserved ADAR targets comprise only a small fragment of the human editosome.

Pinto Y, Cohen HY, Levanon EY.

Genome Biol. 2014 Jan 7;15(1):R5. doi: 10.1186/gb-2014-15-1-r5.

49.

A-to-I RNA editing occurs at over a hundred million genomic sites, located in a majority of human genes.

Bazak L, Haviv A, Barak M, Jacob-Hirsch J, Deng P, Zhang R, Isaacs FJ, Rechavi G, Li JB, Eisenberg E, Levanon EY.

Genome Res. 2014 Mar;24(3):365-76. doi: 10.1101/gr.164749.113. Epub 2013 Dec 17.

50.

Differential inhibition of LINE1 and LINE2 retrotransposition by vertebrate AID/APOBEC proteins.

Lindič N, Budič M, Petan T, Knisbacher BA, Levanon EY, Lovšin N.

Retrovirology. 2013 Dec 17;10:156. doi: 10.1186/1742-4690-10-156.

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