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Items: 28

1.

Quantitative glycoproteomics reveals new classes of STT3A- and STT3B-dependent N-glycosylation sites.

Cherepanova NA, Venev SV, Leszyk JD, Shaffer SA, Gilmore R.

J Cell Biol. 2019 Jul 11. pii: jcb.201904004. doi: 10.1083/jcb.201904004. [Epub ahead of print]

PMID:
31296534
2.

Naturally processed HLA-DR3-restricted HHV-6B peptides are recognized broadly with polyfunctional and cytotoxic CD4 T-cell responses.

Becerra-Artiles A, Cruz J, Leszyk JD, Sidney J, Sette A, Shaffer SA, Stern LJ.

Eur J Immunol. 2019 Apr 25. doi: 10.1002/eji.201948126. [Epub ahead of print]

PMID:
31020640
3.

Quantitative proteomics identifies proteins that resist translational repression and become dysregulated in ALS-FUS.

Baron DM, Matheny T, Lin YC, Leszyk JD, Kenna K, Gall KV, Santos DP, Tischbein M, Funes S, Hayward LJ, Kiskinis E, Landers JE, Parker R, Shaffer SA, Bosco DA.

Hum Mol Genet. 2019 Jul 1;28(13):2143-2160. doi: 10.1093/hmg/ddz048.

PMID:
30806671
4.

HLA-DO Modulates the Diversity of the MHC-II Self-peptidome.

Nanaware PP, Jurewicz MM, Leszyk JD, Shaffer SA, Stern LJ.

Mol Cell Proteomics. 2019 Mar;18(3):490-503. doi: 10.1074/mcp.RA118.000956. Epub 2018 Dec 20.

PMID:
30573663
5.

A Lysine Acetyltransferase Contributes to the Metabolic Adaptation to Hypoxia in Mycobacterium tuberculosis.

Rittershaus ESC, Baek SH, Krieger IV, Nelson SJ, Cheng YS, Nambi S, Baker RE, Leszyk JD, Shaffer SA, Sacchettini JC, Sassetti CM.

Cell Chem Biol. 2018 Dec 20;25(12):1495-1505.e3. doi: 10.1016/j.chembiol.2018.09.009. Epub 2018 Oct 11.

PMID:
30318462
6.

Novel allele-specific quantification methods reveal no effects of adult onset CAG repeats on HTT mRNA and protein levels.

Shin A, Shin B, Shin JW, Kim KH, Atwal RS, Hope JM, Gillis T, Leszyk JD, Shaffer SA, Lee R, Kwak S, MacDonald ME, Gusella JF, Seong IS, Lee JM.

Hum Mol Genet. 2017 Apr 1;26(7):1258-1267. doi: 10.1093/hmg/ddx033.

7.

The nucleoside analog clitocine is a potent and efficacious readthrough agent.

Friesen WJ, Trotta CR, Tomizawa Y, Zhuo J, Johnson B, Sierra J, Roy B, Weetall M, Hedrick J, Sheedy J, Takasugi J, Moon YC, Babu S, Baiazitov R, Leszyk JD, Davis TW, Colacino JM, Peltz SW, Welch EM.

RNA. 2017 Apr;23(4):567-577. doi: 10.1261/rna.060236.116. Epub 2017 Jan 17.

8.

Identification of proximal sites for unwound DNA substrate in Escherichia coli topoisomerase I with oxidative crosslinking.

Cheng B, Zhou Q, Weng L, Leszyk JD, Greenberg MM, Tse-Dinh YC.

FEBS Lett. 2017 Jan;591(1):28-38. doi: 10.1002/1873-3468.12517. Epub 2016 Dec 20.

9.

Ataluren stimulates ribosomal selection of near-cognate tRNAs to promote nonsense suppression.

Roy B, Friesen WJ, Tomizawa Y, Leszyk JD, Zhuo J, Johnson B, Dakka J, Trotta CR, Xue X, Mutyam V, Keeling KM, Mobley JA, Rowe SM, Bedwell DM, Welch EM, Jacobson A.

Proc Natl Acad Sci U S A. 2016 Nov 1;113(44):12508-12513. Epub 2016 Oct 4.

10.

Interaction of tau with the RNA-Binding Protein TIA1 Regulates tau Pathophysiology and Toxicity.

Vanderweyde T, Apicco DJ, Youmans-Kidder K, Ash PEA, Cook C, Lummertz da Rocha E, Jansen-West K, Frame AA, Citro A, Leszyk JD, Ivanov P, Abisambra JF, Steffen M, Li H, Petrucelli L, Wolozin B.

Cell Rep. 2016 May 17;15(7):1455-1466. doi: 10.1016/j.celrep.2016.04.045. Epub 2016 May 6.

11.

Spatially distinct and metabolically active membrane domain in mycobacteria.

Hayashi JM, Luo CY, Mayfield JA, Hsu T, Fukuda T, Walfield AL, Giffen SR, Leszyk JD, Baer CE, Bennion OT, Madduri A, Shaffer SA, Aldridge BB, Sassetti CM, Sandler SJ, Kinoshita T, Moody DB, Morita YS.

Proc Natl Acad Sci U S A. 2016 May 10;113(19):5400-5. doi: 10.1073/pnas.1525165113. Epub 2016 Apr 25.

12.

Opposing calcium-dependent signalling pathways control skeletal muscle differentiation by regulating a chromatin remodelling enzyme.

Nasipak BT, Padilla-Benavides T, Green KM, Leszyk JD, Mao W, Konda S, Sif S, Shaffer SA, Ohkawa Y, Imbalzano AN.

Nat Commun. 2015 Jun 17;6:7441. doi: 10.1038/ncomms8441.

13.

Nonsense suppression by near-cognate tRNAs employs alternative base pairing at codon positions 1 and 3.

Roy B, Leszyk JD, Mangus DA, Jacobson A.

Proc Natl Acad Sci U S A. 2015 Mar 10;112(10):3038-43. doi: 10.1073/pnas.1424127112. Epub 2015 Mar 2.

14.

Immunodepletion plasma proteomics by tripleTOF 5600 and Orbitrap elite/LTQ-Orbitrap Velos/Q exactive mass spectrometers.

Jones KA, Kim PD, Patel BB, Kelsen SG, Braverman A, Swinton DJ, Gafken PR, Jones LA, Lane WS, Neveu JM, Leung HE, Shaffer SA, Leszyk JD, Stanley BA, Fox TE, Stanley A, Hall MJ, Hampel H, South CD, de la Chapelle A, Burt RW, Jones DA, Kopelovich L, Yeung AT.

J Proteome Res. 2013 Oct 4;12(10):4351-65. doi: 10.1021/pr400307u. Epub 2013 Sep 19.

15.

The Cellular EJC Interactome Reveals Higher-Order mRNP Structure and an EJC-SR Protein Nexus.

Singh G, Kucukural A, Cenik C, Leszyk JD, Shaffer SA, Weng Z, Moore MJ.

Cell. 2012 Nov 9;151(4):915-916. doi: 10.1016/j.cell.2012.10.032. Epub 2012 Nov 8. No abstract available.

16.

The cellular EJC interactome reveals higher-order mRNP structure and an EJC-SR protein nexus.

Singh G, Kucukural A, Cenik C, Leszyk JD, Shaffer SA, Weng Z, Moore MJ.

Cell. 2012 Nov 9;151(4):750-764. doi: 10.1016/j.cell.2012.10.007. Epub 2012 Oct 18. Erratum in: Cell. 2012 Nov 9;151(4):915-6. Cell. 2012 Nov 9;151(4):915-916.

17.

LPS remodeling is an evolved survival strategy for bacteria.

Li Y, Powell DA, Shaffer SA, Rasko DA, Pelletier MR, Leszyk JD, Scott AJ, Masoudi A, Goodlett DR, Wang X, Raetz CR, Ernst RK.

Proc Natl Acad Sci U S A. 2012 May 29;109(22):8716-21. doi: 10.1073/pnas.1202908109. Epub 2012 May 14. Erratum in: Proc Natl Acad Sci U S A. 2012 Aug 21;109(34):13877.

18.
19.

Proteomic analysis of a detergent-resistant membrane skeleton from neutrophil plasma membranes.

Nebl T, Pestonjamasp KN, Leszyk JD, Crowley JL, Oh SW, Luna EJ.

J Biol Chem. 2002 Nov 8;277(45):43399-409. Epub 2002 Aug 28.

20.

Cytoplasmic dynein intermediate chain phosphorylation regulates binding to dynactin.

Vaughan PS, Leszyk JD, Vaughan KT.

J Biol Chem. 2001 Jul 13;276(28):26171-9. Epub 2001 May 4.

21.
22.

Developmental association of the beta-galactoside-binding protein galectin-1 with the nuclear matrix of rat calvarial osteoblasts.

Choi JY, van Wijnen AJ, Aslam F, Leszyk JD, Stein JL, Stein GS, Lian JB, Penman S.

J Cell Sci. 1998 Oct;111 ( Pt 20):3035-43.

23.

The catalytic subunit of the cAMP-dependent protein kinase of ovine sperm flagella has a unique amino-terminal sequence.

San Agustin JT, Leszyk JD, Nuwaysir LM, Witman GB.

J Biol Chem. 1998 Sep 18;273(38):24874-83.

24.

An essential bipolar mitotic motor.

Kashina AS, Scholey JM, Leszyk JD, Saxton WM.

Nature. 1996 Nov 21;384(6606):225. No abstract available.

25.

The alpha-dystroglycan-beta-dystroglycan complex. Membrane organization and relationship to an agrin receptor.

Deyst KA, Bowe MA, Leszyk JD, Fallon JR.

J Biol Chem. 1995 Oct 27;270(43):25956-9.

26.

Ricin A chain can be chemically cross-linked to the mammalian ribosomal proteins L9 and L10e.

Vater CA, Bartle LM, Leszyk JD, Lambert JM, Goldmacher VS.

J Biol Chem. 1995 May 26;270(21):12933-40.

27.
28.

Structural domains of the extracellular domain of human nerve growth factor receptor detected by partial proteolysis.

Vissavajjhala P, Leszyk JD, Lin-Goerke J, Ross AH.

Arch Biochem Biophys. 1992 Apr;294(1):244-52.

PMID:
1372492

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