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Seed coats as an alternative molecular factory: thinking outside the box.

Francoz E, Lepiniec L, North HM.

Plant Reprod. 2018 Sep;31(3):327-342. doi: 10.1007/s00497-018-0345-2. Epub 2018 Jul 28. Review.


Seeds as perfect factories for developing sustainable agriculture.

Ingram G, North H, Lepiniec L.

Plant Reprod. 2018 Jun 22. doi: 10.1007/s00497-018-0340-7. [Epub ahead of print] No abstract available.


Molecular and epigenetic regulations and functions of the LAFL transcriptional regulators that control seed development.

Lepiniec L, Devic M, Roscoe TJ, Bouyer D, Zhou DX, Boulard C, Baud S, Dubreucq B.

Plant Reprod. 2018 Sep;31(3):291-307. doi: 10.1007/s00497-018-0337-2. Epub 2018 May 24. Review.


LEC1 (NF-YB9) directly interacts with LEC2 to control gene expression in seed.

Boulard C, Thévenin J, Tranquet O, Laporte V, Lepiniec L, Dubreucq B.

Biochim Biophys Acta Gene Regul Mech. 2018 May;1861(5):443-450. doi: 10.1016/j.bbagrm.2018.03.005. Epub 2018 Mar 24.


Combining laser-assisted microdissection (LAM) and RNA-seq allows to perform a comprehensive transcriptomic analysis of epidermal cells of Arabidopsis embryo.

Sakai K, Taconnat L, Borrega N, Yansouni J, Brunaud V, Paysant-Le Roux C, Delannoy E, Martin Magniette ML, Lepiniec L, Faure JD, Balzergue S, Dubreucq B.

Plant Methods. 2018 Feb 3;14:10. doi: 10.1186/s13007-018-0275-x. eCollection 2018.


Overexpression of MYB115, AAD2, or AAD3 in Arabidopsis thaliana seeds yields contrasting omega-7 contents.

Ettaki H, Troncoso-Ponce MA, To A, Barthole G, Lepiniec L, Baud S.

PLoS One. 2018 Jan 30;13(1):e0192156. doi: 10.1371/journal.pone.0192156. eCollection 2018.


Profiling the onset of somatic embryogenesis in Arabidopsis.

Magnani E, Jiménez-Gómez JM, Soubigou-Taconnat L, Lepiniec L, Fiume E.

BMC Genomics. 2017 Dec 29;18(1):998. doi: 10.1186/s12864-017-4391-1.


Developmental patterning of sub-epidermal cells in the outer integument of Arabidopsis seeds.

Fiume E, Coen O, Xu W, Lepiniec L, Magnani E.

PLoS One. 2017 Nov 15;12(11):e0188148. doi: 10.1371/journal.pone.0188148. eCollection 2017.


Regulation and evolution of the interaction of the seed B3 transcription factors with NF-Y subunits.

Boulard C, Fatihi A, Lepiniec L, Dubreucq B.

Biochim Biophys Acta Gene Regul Mech. 2017 Oct;1860(10):1069-1078. doi: 10.1016/j.bbagrm.2017.08.008. Epub 2017 Sep 1. Review.


TRANSPARENT TESTA 16 and 15 act through different mechanisms to control proanthocyanidin accumulation in Arabidopsis testa.

Xu W, Bobet S, Le Gourrierec J, Grain D, De Vos D, Berger A, Salsac F, Kelemen Z, Boucherez J, Rolland A, Mouille G, Routaboul JM, Lepiniec L, Dubos C.

J Exp Bot. 2017 May 17;68(11):2859-2870. doi: 10.1093/jxb/erx151.


Growth of the Arabidopsis sub-epidermal integument cell layers might require an endosperm signal.

Fiume E, Coen O, Xu W, Lepiniec L, Magnani E.

Plant Signal Behav. 2017 Aug 3;12(8):e1339000. doi: 10.1080/15592324.2017.1339000. Epub 2017 Jun 14.


Developmental patterning of the sub-epidermal integument cell layer in Arabidopsis seeds.

Coen O, Fiume E, Xu W, De Vos D, Lu J, Pechoux C, Lepiniec L, Magnani E.

Development. 2017 Apr 15;144(8):1490-1497. doi: 10.1242/dev.146274. Epub 2017 Mar 27.


TWS1, a Novel Small Protein, Regulates Various Aspects of Seed and Plant Development.

Fiume E, Guyon V, Remoué C, Magnani E, Miquel M, Grain D, Lepiniec L.

Plant Physiol. 2016 Nov;172(3):1732-1745. Epub 2016 Sep 9.


The Physcomitrella patens System for Transient Gene Expression Assays.

Thévenin J, Xu W, Vaisman L, Lepiniec L, Dubreucq B, Dubos C.

Methods Mol Biol. 2016;1482:151-61. doi: 10.1007/978-1-4939-6396-6_10.


Fast and Efficient Cloning of Cis-Regulatory Sequences for High-Throughput Yeast One-Hybrid Analyses of Transcription Factors.

Kelemen Z, Przybyla-Toscano J, Tissot N, Lepiniec L, Dubos C.

Methods Mol Biol. 2016;1482:139-49. doi: 10.1007/978-1-4939-6396-6_9.


Deciphering and modifying LAFL transcriptional regulatory network in seed for improving yield and quality of storage compounds.

Fatihi A, Boulard C, Bouyer D, Baud S, Dubreucq B, Lepiniec L.

Plant Sci. 2016 Sep;250:198-204. doi: 10.1016/j.plantsci.2016.06.013. Epub 2016 Jun 23. Review.


Endosperm and Nucellus Develop Antagonistically in Arabidopsis Seeds.

Xu W, Fiume E, Coen O, Pechoux C, Lepiniec L, Magnani E.

Plant Cell. 2016 Jun;28(6):1343-60. doi: 10.1105/tpc.16.00041. Epub 2016 May 27.


Deciphering the Molecular Mechanisms Underpinning the Transcriptional Control of Gene Expression by Master Transcriptional Regulators in Arabidopsis Seed.

Baud S, Kelemen Z, Thévenin J, Boulard C, Blanchet S, To A, Payre M, Berger N, Effroy-Cuzzi D, Franco-Zorrilla JM, Godoy M, Solano R, Thevenon E, Parcy F, Lepiniec L, Dubreucq B.

Plant Physiol. 2016 Jun;171(2):1099-112. doi: 10.1104/pp.16.00034. Epub 2016 Apr 12.


Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast.

Kelemen Z, Sebastian A, Xu W, Grain D, Salsac F, Avon A, Berger N, Tran J, Dubreucq B, Lurin C, Lepiniec L, Contreras-Moreira B, Dubos C.

PLoS One. 2015 Oct 20;10(10):e0141044. doi: 10.1371/journal.pone.0141044. eCollection 2015.


New insights on the organization and regulation of the fatty acid biosynthetic network in the model higher plant Arabidopsis thaliana.

Troncoso-Ponce MA, Nikovics K, Marchive C, Lepiniec L, Baud S.

Biochimie. 2016 Jan;120:3-8. doi: 10.1016/j.biochi.2015.05.013. Epub 2015 May 27. Review.


Chromodomain, Helicase and DNA-binding CHD1 protein, CHR5, are involved in establishing active chromatin state of seed maturation genes.

Shen Y, Devic M, Lepiniec L, Zhou DX.

Plant Biotechnol J. 2015 Aug;13(6):811-20. doi: 10.1111/pbi.12315. Epub 2015 Jan 9.


Transcriptional control of flavonoid biosynthesis by MYB-bHLH-WDR complexes.

Xu W, Dubos C, Lepiniec L.

Trends Plant Sci. 2015 Mar;20(3):176-85. doi: 10.1016/j.tplants.2014.12.001. Epub 2015 Jan 8. Review.


MYB118 represses endosperm maturation in seeds of Arabidopsis.

Barthole G, To A, Marchive C, Brunaud V, Soubigou-Taconnat L, Berger N, Dubreucq B, Lepiniec L, Baud S.

Plant Cell. 2014 Sep;26(9):3519-37. doi: 10.1105/tpc.114.130021. Epub 2014 Sep 5.


Integrating bioinformatic resources to predict transcription factors interacting with cis-sequences conserved in co-regulated genes.

Dubos C, Kelemen Z, Sebastian A, Bülow L, Huep G, Xu W, Grain D, Salsac F, Brousse C, Lepiniec L, Weisshaar B, Contreras-Moreira B, Hehl R.

BMC Genomics. 2014 Apr 28;15:317. doi: 10.1186/1471-2164-15-317.


New insights toward the transcriptional engineering of proanthocyanidin biosynthesis.

Xu W, Lepiniec L, Dubos C.

Plant Signal Behav. 2014 Apr 10;9(4). pii: e28736. [Epub ahead of print]


Specialization of oleosins in oil body dynamics during seed development in Arabidopsis seeds.

Miquel M, Trigui G, d'Andréa S, Kelemen Z, Baud S, Berger A, Deruyffelaere C, Trubuil A, Lepiniec L, Dubreucq B.

Plant Physiol. 2014 Apr;164(4):1866-78. doi: 10.1104/pp.113.233262. Epub 2014 Feb 10.


Complexity and robustness of the flavonoid transcriptional regulatory network revealed by comprehensive analyses of MYB-bHLH-WDR complexes and their targets in Arabidopsis seed.

Xu W, Grain D, Bobet S, Le Gourrierec J, Thévenin J, Kelemen Z, Lepiniec L, Dubos C.

New Phytol. 2014 Apr;202(1):132-44. doi: 10.1111/nph.12620. Epub 2013 Dec 2.


Regulation of flavonoid biosynthesis involves an unexpected complex transcriptional regulation of TT8 expression, in Arabidopsis.

Xu W, Grain D, Le Gourrierec J, Harscoët E, Berger A, Jauvion V, Scagnelli A, Berger N, Bidzinski P, Kelemen Z, Salsac F, Baudry A, Routaboul JM, Lepiniec L, Dubos C.

New Phytol. 2013 Apr;198(1):59-70. doi: 10.1111/nph.12142. Epub 2013 Feb 12.


WRINKLED transcription factors orchestrate tissue-specific regulation of fatty acid biosynthesis in Arabidopsis.

To A, Joubès J, Barthole G, Lécureuil A, Scagnelli A, Jasinski S, Lepiniec L, Baud S.

Plant Cell. 2012 Dec;24(12):5007-23. doi: 10.1105/tpc.112.106120. Epub 2012 Dec 14.


Identification and characterization of MYB-bHLH-WD40 regulatory complexes controlling proanthocyanidin biosynthesis in strawberry (Fragaria × ananassa) fruits.

Schaart JG, Dubos C, Romero De La Fuente I, van Houwelingen AM, de Vos RC, Jonker HH, Xu W, Routaboul JM, Lepiniec L, Bovy AG.

New Phytol. 2013 Jan;197(2):454-67. doi: 10.1111/nph.12017. Epub 2012 Nov 16.


Expression variation in connected recombinant populations of Arabidopsis thaliana highlights distinct transcriptome architectures.

Cubillos FA, Yansouni J, Khalili H, Balzergue S, Elftieh S, Martin-Magniette ML, Serrand Y, Lepiniec L, Baud S, Dubreucq B, Renou JP, Camilleri C, Loudet O.

BMC Genomics. 2012 Mar 27;13:117. doi: 10.1186/1471-2164-13-117.


Metabolite profiling and quantitative genetics of natural variation for flavonoids in Arabidopsis.

Routaboul JM, Dubos C, Beck G, Marquis C, Bidzinski P, Loudet O, Lepiniec L.

J Exp Bot. 2012 Jun;63(10):3749-64. doi: 10.1093/jxb/ers067. Epub 2012 Mar 22.


Controlling lipid accumulation in cereal grains.

Barthole G, Lepiniec L, Rogowsky PM, Baud S.

Plant Sci. 2012 Apr;185-186:33-9. doi: 10.1016/j.plantsci.2011.09.002. Epub 2011 Sep 8.


Transcriptional regulation of Arabidopsis LEAFY COTYLEDON2 involves RLE, a cis-element that regulates trimethylation of histone H3 at lysine-27.

Berger N, Dubreucq B, Roudier F, Dubos C, Lepiniec L.

Plant Cell. 2011 Nov;23(11):4065-78. doi: 10.1105/tpc.111.087866. Epub 2011 Nov 11.


A new system for fast and quantitative analysis of heterologous gene expression in plants.

Thévenin J, Dubos C, Xu W, Le Gourrierec J, Kelemen Z, Charlot F, Nogué F, Lepiniec L, Dubreucq B.

New Phytol. 2012 Jan;193(2):504-12. doi: 10.1111/j.1469-8137.2011.03936.x. Epub 2011 Oct 24.


A comprehensive overview of grain development in Brachypodium distachyon variety Bd21.

Guillon F, Larré C, Petipas F, Berger A, Moussawi J, Rogniaux H, Santoni A, Saulnier L, Jamme F, Miquel M, Lepiniec L, Dubreucq B.

J Exp Bot. 2012 Jan;63(2):739-55. doi: 10.1093/jxb/err298. Epub 2011 Oct 20.


PII is induced by WRINKLED1 and fine-tunes fatty acid composition in seeds of Arabidopsis thaliana.

Baud S, Feria Bourrellier AB, Azzopardi M, Berger A, Dechorgnat J, Daniel-Vedele F, Lepiniec L, Miquel M, Rochat C, Hodges M, Ferrario-Méry S.

Plant J. 2010 Oct;64(2):291-303. doi: 10.1111/j.1365-313X.2010.04332.x. Epub 2010 Sep 16.


NOF1 encodes an Arabidopsis protein involved in the control of rRNA expression.

Harscoët E, Dubreucq B, Palauqui JC, Lepiniec L.

PLoS One. 2010 Sep 20;5(9):e12829. doi: 10.1371/journal.pone.0012829.


MYB transcription factors in Arabidopsis.

Dubos C, Stracke R, Grotewold E, Weisshaar B, Martin C, Lepiniec L.

Trends Plant Sci. 2010 Oct;15(10):573-81. doi: 10.1016/j.tplants.2010.06.005. Epub 2010 Jul 30. Review.


Arabidopsis seed secrets unravelled after a decade of genetic and omics-driven research.

North H, Baud S, Debeaujon I, Dubos C, Dubreucq B, Grappin P, Jullien M, Lepiniec L, Marion-Poll A, Miquel M, Rajjou L, Routaboul JM, Caboche M.

Plant J. 2010 Mar;61(6):971-81. doi: 10.1111/j.1365-313X.2009.04095.x. Review.


Physiological and developmental regulation of seed oil production.

Baud S, Lepiniec L.

Prog Lipid Res. 2010 Jul;49(3):235-49. doi: 10.1016/j.plipres.2010.01.001. Epub 2010 Jan 25. Review.


Role of WRINKLED1 in the transcriptional regulation of glycolytic and fatty acid biosynthetic genes in Arabidopsis.

Baud S, Wuillème S, To A, Rochat C, Lepiniec L.

Plant J. 2009 Dec;60(6):933-47. doi: 10.1111/j.1365-313X.2009.04011.x.


Regulation of HSD1 in seeds of Arabidopsis thaliana.

Baud S, Dichow NR, Kelemen Z, d'Andréa S, To A, Berger N, Canonge M, Kronenberger J, Viterbo D, Dubreucq B, Lepiniec L, Chardot T, Miquel M.

Plant Cell Physiol. 2009 Aug;50(8):1463-78. doi: 10.1093/pcp/pcp092. Epub 2009 Jun 20.


The promoter of the Arabidopsis thaliana BAN gene is active in proanthocyanidin-accumulating cells of the Brassica napus seed coat.

Nesi N, Lucas MO, Auger B, Baron C, Lécureuil A, Guerche P, Kronenberger J, Lepiniec L, Debeaujon I, Renard M.

Plant Cell Rep. 2009 Apr;28(4):601-17. doi: 10.1007/s00299-008-0667-x. Epub 2009 Jan 20.


Regulation of de novo fatty acid synthesis in maturing oilseeds of Arabidopsis.

Baud S, Lepiniec L.

Plant Physiol Biochem. 2009 Jun;47(6):448-55. doi: 10.1016/j.plaphy.2008.12.006. Epub 2008 Dec 16.


Compared analysis of the regulatory systems controlling lipogenesis in hepatocytes of mice and in maturing oilseeds of Arabidopsis.

Baud S, Lepiniec L.

C R Biol. 2008 Oct;331(10):737-45. doi: 10.1016/j.crvi.2008.07.015. Epub 2008 Aug 30. Review.


Promoter DNA hypermethylation and gene repression in undifferentiated Arabidopsis cells.

Berdasco M, Alcázar R, García-Ortiz MV, Ballestar E, Fernández AF, Roldán-Arjona T, Tiburcio AF, Altabella T, Buisine N, Quesneville H, Baudry A, Lepiniec L, Alaminos M, Rodríguez R, Lloyd A, Colot V, Bender J, Canal MJ, Esteller M, Fraga MF.

PLoS One. 2008 Oct 1;3(10):e3306. doi: 10.1371/journal.pone.0003306.


Study of AtSUS2 localization in seeds reveals a strong association with plastids.

Núñez JG, Kronenberger J, Wuillème S, Lepiniec L, Rochat C.

Plant Cell Physiol. 2008 Oct;49(10):1621-6. doi: 10.1093/pcp/pcn117. Epub 2008 Aug 12.


MYBL2 is a new regulator of flavonoid biosynthesis in Arabidopsis thaliana.

Dubos C, Le Gourrierec J, Baudry A, Huep G, Lanet E, Debeaujon I, Routaboul JM, Alboresi A, Weisshaar B, Lepiniec L.

Plant J. 2008 Sep;55(6):940-53. doi: 10.1111/j.1365-313X.2008.03564.x. Epub 2008 Jun 4.

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