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Lactobacillus and Pediococcus ameliorate progression of non-alcoholic fatty liver disease through modulation of the gut microbiome.

Lee NY, Yoon SJ, Han DH, Gupta H, Youn GS, Shin MJ, Ham YL, Kwak MJ, Kim BY, Yu JS, Lee DY, Park TS, Park SH, Kim BK, Joung HC, Choi IS, Hong JT, Kim DJ, Han SH, Suk KT.

Gut Microbes. 2020 Jan 22:1-18. doi: 10.1080/19490976.2020.1712984. [Epub ahead of print]


Fluoroquinolone resistance in Haemophilus influenzae from nursing home residents in Taiwan: correlation of MICs and mutations in QRDRs.

Chang CM, Shih HI, Wu CJ, Lauderdale TL, Lee NY, Lee CC, Chen YC, Huang CC, Ko WC.

J Appl Microbiol. 2020 Jan 17. doi: 10.1111/jam.14580. [Epub ahead of print]


A benchmark of batch-effect correction methods for single-cell RNA sequencing data.

Tran HTN, Ang KS, Chevrier M, Zhang X, Lee NYS, Goh M, Chen J.

Genome Biol. 2020 Jan 16;21(1):12. doi: 10.1186/s13059-019-1850-9.


7‑MEGA™ 500 regulates the expression of COX‑2, MMP‑3 and type 1 procollagen in UVB‑irradiated human keratinocytes and dermal fibroblasts.

Park YK, Yadav AK, Roshanzadeh A, Ryoo YW, Kim BH, Cha JY, Son YK, Lee NY, Jang BC.

Mol Med Rep. 2019 Dec 20. doi: 10.3892/mmr.2019.10899. [Epub ahead of print]


Bullying Reporting Concerns as a Mediator Between School Climate and Bullying Victimization/Aggression.

Zhang S, Mulhall PF, Flowers N, Lee NY.

J Interpers Violence. 2019 Nov 26:886260519889926. doi: 10.1177/0886260519889926. [Epub ahead of print]


Chronic heart failure increases negative chronotropic effects of adenosine in canine sinoatrial cells via A1R stimulation and GIRK-mediated IKado.

Long VP 3rd, Bonilla IM, Baine S, Glynn P, Kumar S, Schober K, Mowrey K, Weiss R, Lee NY, Mohler PJ, Györke S, Hund TJ, Fedorov VV, Carnes CA.

Life Sci. 2020 Jan 1;240:117068. doi: 10.1016/j.lfs.2019.117068. Epub 2019 Nov 18.


Outcomes of surgery and postoperative radiation therapy in managing medullary thyroid carcinoma.

Groen AH, Beckham TH, Links TP, Goldman DA, Sherman EJ, Tuttle MM, Bijl HP, Wong RJ, Plukker JTM, Lee NY; and other Group/Consortium Members.

J Surg Oncol. 2019 Nov 16. doi: 10.1002/jso.25761. [Epub ahead of print]


Context-dependent activation of SIRT3 is necessary for anchorage-independent survival and metastasis of ovarian cancer cells.

Kim YS, Gupta Vallur P, Jones VM, Worley BL, Shimko S, Shin DH, Crawford LC, Chen CW, Aird KM, Abraham T, Shepherd TG, Warrick JI, Lee NY, Phaeton R, Mythreye K, Hempel N.

Oncogene. 2019 Nov 13. doi: 10.1038/s41388-019-1097-7. [Epub ahead of print]


Clinical Characteristics and Outcomes of Surgically Resected Solitary Pulmonary Nodules Due to Nontuberculous Mycobacterial Infections.

Choi Y, Jhun BW, Kim J, Huh HJ, Lee NY.

J Clin Med. 2019 Nov 7;8(11). pii: E1898. doi: 10.3390/jcm8111898.


Multifaceted roles of TAK1 signaling in cancer.

Mukhopadhyay H, Lee NY.

Oncogene. 2019 Nov 6. doi: 10.1038/s41388-019-1088-8. [Epub ahead of print] Review.


Hybrid elastomer-plastic microfluidic device as a convenient model for mimicking the blood-brain barrier in vitro.

Nguyen PQH, Duong DD, Kwun JD, Lee NY.

Biomed Microdevices. 2019 Nov 4;21(4):90. doi: 10.1007/s10544-019-0446-1.


A Phase Ib Study of Cetuximab and BYL719 (Alpelisib) Concurrent with Intensity-Modulated Radiation Therapy in Stage III-IVB Head and Neck Squamous Cell Carcinoma.

Dunn LA, Riaz N, Fury MG, McBride SM, Michel L, Lee NY, Sherman EJ, Baxi SS, Haque SS, Katabi N, Wong RJ, Xiao H, Ho AL, Pfister DG.

Int J Radiat Oncol Biol Phys. 2019 Oct 31. pii: S0360-3016(19)33963-X. doi: 10.1016/j.ijrobp.2019.09.050. [Epub ahead of print]


Diagnostic Performance of the GENEDIA MTB/NTM Detection Kit for Detecting Mycobacterium tuberculosis and Nontuberculous Mycobacteria With Sputum Specimens.

Shin S, Yoo IY, Shim HJ, Kang OK, Jhun BW, Koh WJ, Huh HJ, Lee NY.

Ann Lab Med. 2020 Mar;40(2):169-173. doi: 10.3343/alm.2020.40.2.169.


Nanoparticles in the Treatment of Infections Caused by Multidrug-Resistant Organisms.

Lee NY, Ko WC, Hsueh PR.

Front Pharmacol. 2019 Oct 4;10:1153. doi: 10.3389/fphar.2019.01153. eCollection 2019. Review.


Clinical Significance of Isolates Known to Be Blood Culture Contaminants in Pediatric Patients.

Chun S, Kang CI, Kim YJ, Lee NY.

Medicina (Kaunas). 2019 Oct 17;55(10). pii: E696. doi: 10.3390/medicina55100696.


Myeloperoxidase Deficiency Manifesting as Pseudoneutropenia with Low Mean Peroxidase Index and High Monocyte Count in 4 Adult Patients.

Roh S, Ham JY, Song KE, Hwang N, Lee NY.

Lab Med. 2019 Oct 17. pii: lmz060. doi: 10.1093/labmed/lmz060. [Epub ahead of print]


Prognostic factors associated with long-term mortality in 1445 patients with nontuberculous mycobacterial pulmonary disease: a 15-year follow-up study.

Jhun BW, Moon SM, Jeon K, Kwon OJ, Yoo H, Carriere KC, Huh HJ, Lee NY, Shin SJ, Daley CL, Koh WJ.

Eur Respir J. 2020 Jan 2;55(1). pii: 1900798. doi: 10.1183/13993003.00798-2019. Print 2020 Jan.


Bioengineering strategies for bone and cartilage tissue regeneration using growth factors and stem cells.

Qasim M, Chae DS, Lee NY.

J Biomed Mater Res A. 2020 Mar;108(3):394-411. doi: 10.1002/jbm.a.36817. Epub 2019 Nov 12. Review.


Outcomes of acute lymphoblastic leukaemia in adolescent and young adult Korean patients.

Kim YA, Ju HY, Park HJ, Lee NY, Lee HJ, Lee H, Ghang H.

Br J Haematol. 2019 Oct 14. doi: 10.1111/bjh.16242. [Epub ahead of print]


Intermittent Treatment with Azithromycin and Ethambutol for Noncavitary Mycobacterium avium Complex Pulmonary Disease.

Moon SM, Yoo IY, Huh HJ, Lee NY, Jhun BW.

Antimicrob Agents Chemother. 2019 Dec 20;64(1). pii: e01787-19. doi: 10.1128/AAC.01787-19. Print 2019 Dec 20.


Deep Neck Inflammation: Probable Kawasaki Disease in Korean Children.

Lim S, Lee NY, Han SB, Jeong DC, Kang JH.

Clin Exp Otorhinolaryngol. 2019 Oct 11. doi: 10.21053/ceo.2019.00948. [Epub ahead of print]


Outcomes of multimodal therapy in a large series of patients with anaplastic thyroid cancer.

Fan D, Ma J, Bell AC, Groen AH, Olsen KS, Lok BH, Leeman JE, Anderson E, Riaz N, McBride S, Ganly I, Shaha AR, Sherman EJ, Tsai CJ, Kang JJ, Lee NY.

Cancer. 2020 Jan 15;126(2):444-452. doi: 10.1002/cncr.32548. Epub 2019 Oct 8.


Human papillomavirus 16 promotes microhomology-mediated end-joining.

Leeman JE, Li Y, Bell A, Hussain SS, Majumdar R, Rong-Mullins X, Blecua P, Damerla R, Narang H, Ravindran PT, Lee NY, Riaz N, Powell SN, Higginson DS.

Proc Natl Acad Sci U S A. 2019 Oct 22;116(43):21573-21579. doi: 10.1073/pnas.1906120116. Epub 2019 Oct 7.


Ten Cases of Taenia saginata Infection Confirmed by Analysis of the Internal Transcribed Spacer 1 rDNA Region in the Republic of Korea.

Song SM, Yun HS, VanBik D, Chang HH, Lee SA, Kim SW, Ryoo N, Eun DY, Lee NY, Goo YK, Hong Y, Ock M, Cha HJ, Chung DI.

Korean J Parasitol. 2019 Aug;57(4):417-422. doi: 10.3347/kjp.2019.57.4.417. Epub 2019 Aug 31.


Types and Frequencies of Pre-Analytical Errors in the Clinical Laboratory at the University Hospital of Korea.

Lee NY.

Clin Lab. 2019 Sep 1;65(9). doi: 10.7754/Clin.Lab.2019.190512.


Effect of Aged and Fermented Garlic Extracts as Natural Antioxidants on Lipid Oxidation in Pork Patties.

Lee HJ, Yoon DK, Lee NY, Lee CH.

Food Sci Anim Resour. 2019 Aug;39(4):610-622. doi: 10.5851/kosfa.2019.e51. Epub 2019 Aug 31.


Fully Integrated and Foldable Microdevice Encapsulated with Agarose for Long-Term Storage Potential for Point-of-Care Testing of Multiplex Foodborne Pathogens.

Trinh TND, La HC, Lee NY.

ACS Sens. 2019 Oct 25;4(10):2754-2762. doi: 10.1021/acssensors.9b01299. Epub 2019 Sep 24.


Detection of Early Human Papillomavirus-Associated Cancers by Liquid Biopsy.

Damerla RR, Lee NY, You D, Soni R, Shah R, Reyngold M, Katabi N, Wu V, McBride SM, Tsai CJ, Riaz N, Powell SN, Babady NE, Viale A, Higginson DS.

JCO Precis Oncol. 2019;3. doi: 10.1200/PO.18.00276. Epub 2019 Apr 3.


A randomized, double-blind, 6-week prospective pilot study on the efficacy and safety of dose escalation in non-remitters in comparison to those of the standard dose of escitalopram for major depressive disorder.

Kim EY, Kim SH, Lee HJ, Lee NY, Kim HY, Park CHK, Ahn YM.

J Affect Disord. 2019 Dec 1;259:91-97. doi: 10.1016/j.jad.2019.08.057. Epub 2019 Aug 19.


Comparison of 16S Ribosomal RNA Targeted Sequencing and Culture for Bacterial Identification in Normally Sterile Body Fluid Samples: Report of a 10-Year Clinical Laboratory Review.

Yoo IY, Kang OK, Lee MK, Kim YJ, Cho SY, Huh K, Kang CI, Chung DR, Peck KR, Huh HJ, Lee NY.

Ann Lab Med. 2020 Jan;40(1):63-67. doi: 10.3343/alm.2020.40.1.63.


Linezolid Resistance in Methicillin-Resistant Staphylococcus aureus in Korea: High Rate of False Resistance to Linezolid by the VITEK 2 System.

Yoo IY, Kang OK, Shim HJ, Huh HJ, Lee NY.

Ann Lab Med. 2020 Jan;40(1):57-62. doi: 10.3343/alm.2020.40.1.57.


Aeromonas Isolates from Fish and Patients in Tainan City, Taiwan: Genotypic and Phenotypic Characteristics.

Wu CJ, Ko WC, Lee NY, Su SL, Li CW, Li MC, Chen YW, Su YC, Shu CY, Lin YT, Chen PL.

Appl Environ Microbiol. 2019 Oct 16;85(21). pii: e01360-19. doi: 10.1128/AEM.01360-19. Print 2019 Nov 1.


Predicting radiation dosimetric distribution in different regions of the jaw in patients receiving radiotherapy for squamous cell carcinoma of the tonsil.

Tsai CJ, Verma N, Owosho AA, Hilden P, Leeman J, Yom S, Huryn JM, Lee NY, Estilo CL.

Head Neck. 2019 Oct;41(10):3604-3611. doi: 10.1002/hed.25883. Epub 2019 Aug 5.


Advancements and frontiers in nano-based 3D and 4D scaffolds for bone and cartilage tissue engineering.

Qasim M, Chae DS, Lee NY.

Int J Nanomedicine. 2019 Jun 11;14:4333-4351. doi: 10.2147/IJN.S209431. eCollection 2019. Review.


Effects of environmental disinfection on the isolation of vancomycin-resistant Enterococcus after a hospital-associated outbreak of Middle East respiratory syndrome.

Ko JH, Kim SH, Lee NY, Kim YJ, Cho SY, Kang CI, Chung DR, Peck KR.

Am J Infect Control. 2019 Dec;47(12):1516-1518. doi: 10.1016/j.ajic.2019.05.032. Epub 2019 Jul 12.


The Society for Immunotherapy of Cancer consensus statement on immunotherapy for the treatment of squamous cell carcinoma of the head and neck (HNSCC).

Cohen EEW, Bell RB, Bifulco CB, Burtness B, Gillison ML, Harrington KJ, Le QT, Lee NY, Leidner R, Lewis RL, Licitra L, Mehanna H, Mell LK, Raben A, Sikora AG, Uppaluri R, Whitworth F, Zandberg DP, Ferris RL.

J Immunother Cancer. 2019 Jul 15;7(1):184. doi: 10.1186/s40425-019-0662-5.


Poor prognosis of Candida tropicalis among non-albicans candidemia: a retrospective multicenter cohort study, Korea.

Ko JH, Jung DS, Lee JY, Kim HA, Ryu SY, Jung SI, Joo EJ, Cheon S, Kim YS, Kim SW, Cho SY, Kang CI, Chung DR, Lee NY, Peck KR.

Diagn Microbiol Infect Dis. 2019 Oct;95(2):195-200. doi: 10.1016/j.diagmicrobio.2019.05.017. Epub 2019 May 31.


International Guideline on Dose Prioritization and Acceptance Criteria in Radiation Therapy Planning for Nasopharyngeal Carcinoma.

Lee AW, Ng WT, Pan JJ, Chiang CL, Poh SS, Choi HC, Ahn YC, AlHussain H, Corry J, Grau C, Grégoire V, Harrington KJ, Hu CS, Kwong DL, Langendijk JA, Le QT, Lee NY, Lin JC, Lu TX, Mendenhall WM, O'Sullivan B, Ozyar E, Peters LJ, Rosenthal DI, Sanguineti G, Soong YL, Tao Y, Yom SS, Wee JT.

Int J Radiat Oncol Biol Phys. 2019 Nov 1;105(3):567-580. doi: 10.1016/j.ijrobp.2019.06.2540. Epub 2019 Jul 2. Erratum in: Int J Radiat Oncol Biol Phys. 2019 Dec 1;105(5):1166-1167.


Paper-Based All-in-One Origami Microdevice for Nucleic Acid Amplification Testing for Rapid Colorimetric Identification of Live Cells for Point-of-Care Testing.

Trieu PT, Lee NY.

Anal Chem. 2019 Sep 3;91(17):11013-11022. doi: 10.1021/acs.analchem.9b01263. Epub 2019 Jul 18.


Optimal mass transport kinetic modeling for head and neck DCE-MRI: Initial analysis.

Elkin R, Nadeem S, LoCastro E, Paudyal R, Hatzoglou V, Lee NY, Shukla-Dave A, Deasy JO, Tannenbaum A.

Magn Reson Med. 2019 Dec;82(6):2314-2325. doi: 10.1002/mrm.27897. Epub 2019 Jul 4.


First Isolation of Mycobacterium virginiense From a Human Pulmonary Specimen.

Jung J, Yoo IY, Jhun BW, Koh WJ, Lee NY, Huh HJ.

Ann Lab Med. 2019 Nov;39(6):596-598. doi: 10.3343/alm.2019.39.6.596. No abstract available.


Evidence that 6q25.1 variant rs6931104 confers susceptibility to chronic myeloid leukemia through RMND1 regulation.

Woo YM, Kim S, Park JH, Lee NY, Kim JW, Kim DDH.

PLoS One. 2019 Jun 25;14(6):e0218968. doi: 10.1371/journal.pone.0218968. eCollection 2019.


Response-Related Factors of Bone Marrow-Derived Mesenchymal Stem Cells Transplantation in Patients with Alcoholic Cirrhosis.

Gupta H, Youn GS, Han SH, Shin MJ, Yoon SJ, Han DH, Lee NY, Kim DJ, Baik SK, Suk KT.

J Clin Med. 2019 Jun 17;8(6). pii: E862. doi: 10.3390/jcm8060862.


Endoscopic management of duodenal perforations caused by migrated biliary plastic stents.

Kim HS, Moon HJ, Lee NY, Lee HT, Woo MS, Lee JW, Jang IS, Lee KD.

Endosc Int Open. 2019 Jun;7(6):E792-E795. doi: 10.1055/a-0887-4200. Epub 2019 Jun 12.


In Vitro Activity of Bedaquiline and Delamanid against Nontuberculous Mycobacteria, Including Macrolide-Resistant Clinical Isolates.

Kim DH, Jhun BW, Moon SM, Kim SY, Jeon K, Kwon OJ, Huh HJ, Lee NY, Shin SJ, Daley CL, Koh WJ.

Antimicrob Agents Chemother. 2019 Jul 25;63(8). pii: e00665-19. doi: 10.1128/AAC.00665-19. Print 2019 Aug.


Treatment of community-onset pneumonia in neutropenic cancer patients: β-lactam monotherapy versus combination antibiotic regimens.

Seok H, Ko JH, Peck KR, Kim JY, Lee JH, Park GE, Cho SY, Kang CI, Lee NY, Chung DR.

Pneumonia (Nathan). 2019 Jun 5;11:2. doi: 10.1186/s41479-019-0061-1. eCollection 2019.


GenoType NTM-DR Performance Evaluation for Identification of Mycobacterium avium Complex and Mycobacterium abscessus and Determination of Clarithromycin and Amikacin Resistance.

Huh HJ, Kim SY, Shim HJ, Kim DH, Yoo IY, Kang OK, Ki CS, Shin SY, Jhun BW, Shin SJ, Daley CL, Koh WJ, Lee NY.

J Clin Microbiol. 2019 Jul 26;57(8). pii: e00516-19. doi: 10.1128/JCM.00516-19. Print 2019 Aug.


Reduction of pre-analytical errors in the clinical laboratory at the University Hospital of Korea through quality improvement activities.

Lee NY.

Clin Biochem. 2019 Aug;70:24-29. doi: 10.1016/j.clinbiochem.2019.05.016. Epub 2019 May 31.


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