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Omics Forecasting: Predictive Calculations Permit the Rapid Interpretation of High-Resolution Mass Spectral Data from Complex Mixtures.

Cave J, Lebrilla CB, Parker EA, Waterhouse AL.

J Agric Food Chem. 2019 Oct 11. doi: 10.1021/acs.jafc.9b04384. [Epub ahead of print]


Tumor-Selective Altered Glycosylation and Functional Attenuation of CD73 in Human Hepatocellular Carcinoma.

Alcedo KP, Guerrero A, Basrur V, Fu D, Richardson ML, McLane JS, Tsou CC, Nesvizhskii AI, Welling TH, Lebrilla CB, Otey CA, Kim HJ, Omary MB, Snider NT.

Hepatol Commun. 2019 Aug 9;3(10):1400-1414. doi: 10.1002/hep4.1410. eCollection 2019 Oct.


Unveiling the metabolic fate of monosaccharides in cell membranes with glycomic and glycoproteomic analyses.

Xu G, Wong M, Li Q, Park D, Cheng Z, Lebrilla CB.

Chem Sci. 2019 Jun 11;10(29):6992-7002. doi: 10.1039/c9sc01653h. eCollection 2019 Aug 7.


Discovery of Serotransferrin Glycoforms: Novel Markers for Diagnosis of Liver Periductal Fibrosis and Prediction of Cholangiocarcinoma.

Jamnongkan W, Lebrilla CB, Barboza M, Techasen A, Loilome W, Sithithaworn P, Khuntikeo N, Pairojkul C, Chamadol N, Thanan R, Yongvanit P.

Biomolecules. 2019 Sep 27;9(10). pii: E538. doi: 10.3390/biom9100538.


Site-Specific Glycoprofiles of HDL-Associated ApoE are Correlated with HDL Functional Capacity and Unaffected by Short-Term Diet.

Zhu C, Wong M, Li Q, Sawrey-Kubicek L, Beals E, Rhodes CH, Sacchi R, Lebrilla CB, Zivkovic AM.

J Proteome Res. 2019 Oct 1. doi: 10.1021/acs.jproteome.9b00450. [Epub ahead of print]


Development of an Extensive Linkage Library for Characterization of Carbohydrates.

Galermo AG, Nandita E, Castillo JJ, Amicucci MJ, Lebrilla CB.

Anal Chem. 2019 Oct 15;91(20):13022-13031. doi: 10.1021/acs.analchem.9b03101. Epub 2019 Sep 30.


Characterization of Cell Glycocalyx with Mass Spectrometry Methods.

Li Q, Xie Y, Wong M, Lebrilla CB.

Cells. 2019 Aug 13;8(8). pii: E882. doi: 10.3390/cells8080882. Review.


Identification of potential sialic acid binding proteins on cell membranes by proximity chemical labeling.

Li Q, Xie Y, Xu G, Lebrilla CB.

Chem Sci. 2019 May 14;10(24):6199-6209. doi: 10.1039/c9sc01360a. eCollection 2019 Jun 28.


Effects of N-Glycosylation on the Structure, Function, and Stability of a Plant-Made Fc-Fusion Anthrax Decoy Protein.

Xiong Y, Karuppanan K, Bernardi A, Li Q, Kommineni V, Dandekar AM, Lebrilla CB, Faller R, McDonald KA, Nandi S.

Front Plant Sci. 2019 Jun 28;10:768. doi: 10.3389/fpls.2019.00768. eCollection 2019.


Selective Proteolysis of α-Lactalbumin by Endogenous Enzymes of Human Milk at Acidic pH.

Gan J, Zheng J, Krishnakumar N, Goonatilleke E, Lebrilla CB, Barile D, German JB.

Mol Nutr Food Res. 2019 Sep;63(18):e1900259. doi: 10.1002/mnfr.201900259. Epub 2019 Jul 16.


Recognition of specific sialoglycan structures by oral streptococci impacts the severity of endocardial infection.

Bensing BA, Li L, Yakovenko O, Wong M, Barnard KN, Iverson TM, Lebrilla CB, Parrish CR, Thomas WE, Xiong Y, Sullam PM.

PLoS Pathog. 2019 Jun 24;15(6):e1007896. doi: 10.1371/journal.ppat.1007896. eCollection 2019 Jun.


Human Milk Proteins and Their Glycosylation Exhibit Quantitative Dynamic Variations during Lactation.

Goonatilleke E, Huang J, Xu G, Wu L, Smilowitz JT, German JB, Lebrilla CB.

J Nutr. 2019 Aug 1;149(8):1317-1325. doi: 10.1093/jn/nxz086.


Strategy for Structural Elucidation of Polysaccharides: Elucidation of a Maize Mucilage that Harbors Diazotrophic Bacteria.

Amicucci MJ, Galermo AG, Guerrero A, Treves G, Nandita E, Kailemia MJ, Higdon SM, Pozzo T, Labavitch JM, Bennett AB, Lebrilla CB.

Anal Chem. 2019 Jun 4;91(11):7254-7265. doi: 10.1021/acs.analchem.9b00789. Epub 2019 Apr 30.


T-cell derived acetylcholine aids host defenses during enteric bacterial infection with Citrobacter rodentium.

Ramirez VT, Godinez DR, Brust-Mascher I, Nonnecke EB, Castillo PA, Gardner MB, Tu D, Sladek JA, Miller EN, Lebrilla CB, Bevins CL, Gareau MG, Reardon C.

PLoS Pathog. 2019 Apr 11;15(4):e1007719. doi: 10.1371/journal.ppat.1007719. eCollection 2019 Apr.


Infection-generated electric field in gut epithelium drives bidirectional migration of macrophages.

Sun Y, Reid B, Ferreira F, Luxardi G, Ma L, Lokken KL, Zhu K, Xu G, Sun Y, Ryzhuk V, Guo BP, Lebrilla CB, Maverakis E, Mogilner A, Zhao M.

PLoS Biol. 2019 Apr 9;17(4):e3000044. doi: 10.1371/journal.pbio.3000044. eCollection 2019 Apr.


Function without Structures: The Need for In-Depth Analysis of Dietary Carbohydrates.

Amicucci MJ, Nandita E, Lebrilla CB.

J Agric Food Chem. 2019 Apr 24;67(16):4418-4424. doi: 10.1021/acs.jafc.9b00720. Epub 2019 Apr 10. Review.


Site-Specific Glycosylation Quantitation of 50 Serum Glycoproteins Enhanced by Predictive Glycopeptidomics for Improved Disease Biomarker Discovery.

Li Q, Kailemia MJ, Merleev AA, Xu G, Serie D, Danan LM, Haj FG, Maverakis E, Lebrilla CB.

Anal Chem. 2019 Apr 16;91(8):5433-5445. doi: 10.1021/acs.analchem.9b00776. Epub 2019 Mar 27.


O-GlcNAc-induced nuclear translocation of hnRNP-K is associated with progression and metastasis of cholangiocarcinoma.

Phoomak C, Park D, Silsirivanit A, Sawanyawisuth K, Vaeteewoottacharn K, Detarya M, Wongkham C, Lebrilla CB, Wongkham S.

Mol Oncol. 2019 Feb;13(2):338-357. doi: 10.1002/1878-0261.12406. Epub 2019 Jan 10.


Variation among populations in the immune protein composition of mother's milk reflects subsistence pattern.

Klein LD, Huang J, Quinn EA, Martin MA, Breakey AA, Gurven M, Kaplan H, Valeggia C, Jasienska G, Scelza B, Lebrilla CB, Hinde K.

Evol Med Public Health. 2018 Oct 13;2018(1):230-245. doi: 10.1093/emph/eoy031. eCollection 2018.


Liquid Chromatography-Tandem Mass Spectrometry Approach for Determining Glycosidic Linkages.

Galermo AG, Nandita E, Barboza M, Amicucci MJ, Vo TT, Lebrilla CB.

Anal Chem. 2018 Nov 6;90(21):13073-13080. doi: 10.1021/acs.analchem.8b04124. Epub 2018 Oct 18.


Membrane glycomics reveal heterogeneity and quantitative distribution of cell surface sialylation.

Park DD, Xu G, Wong M, Phoomak C, Liu M, Haigh NE, Wongkham S, Yang P, Maverakis E, Lebrilla CB.

Chem Sci. 2018 Jun 27;9(29):6271-6285. doi: 10.1039/c8sc01875h. eCollection 2018 Aug 7.


Intact glycosphingolipidomic analysis of the cell membrane during differentiation yields extensive glycan and lipid changes.

Wong M, Xu G, Park D, Barboza M, Lebrilla CB.

Sci Rep. 2018 Jul 20;8(1):10993. doi: 10.1038/s41598-018-29324-7.


FGF2 Induces Migration of Human Bone Marrow Stromal Cells by Increasing Core Fucosylations on N-Glycans of Integrins.

Awan B, Turkov D, Schumacher C, Jacobo A, McEnerney A, Ramsey A, Xu G, Park D, Kalomoiris S, Yao W, Jao LE, Allende ML, Lebrilla CB, Fierro FA.

Stem Cell Reports. 2018 Aug 14;11(2):325-333. doi: 10.1016/j.stemcr.2018.06.007. Epub 2018 Jul 5.


O-GlcNAcylation mediates metastasis of cholangiocarcinoma through FOXO3 and MAN1A1.

Phoomak C, Silsirivanit A, Park D, Sawanyawisuth K, Vaeteewoottacharn K, Wongkham C, Lam EW, Pairojkul C, Lebrilla CB, Wongkham S.

Oncogene. 2018 Oct;37(42):5648-5665. doi: 10.1038/s41388-018-0366-1. Epub 2018 Jun 18.


Streptococcal Siglec-like adhesins recognize different subsets of human plasma glycoproteins: implications for infective endocarditis.

Bensing BA, Li Q, Park D, Lebrilla CB, Sullam PM.

Glycobiology. 2018 Aug 1;28(8):601-611. doi: 10.1093/glycob/cwy052.


Transient Recombinant Protein Production in Glycoengineered Nicotiana benthamiana Cell Suspension Culture.

Sukenik SC, Karuppanan K, Li Q, Lebrilla CB, Nandi S, McDonald KA.

Int J Mol Sci. 2018 Apr 16;19(4). pii: E1205. doi: 10.3390/ijms19041205.


Glycoform Modification of Secreted Recombinant Glycoproteins through Kifunensine Addition during Transient Vacuum Agroinfiltration.

Xiong Y, Li Q, Kailemia MJ, Lebrilla CB, Nandi S, McDonald KA.

Int J Mol Sci. 2018 Mar 17;19(3). pii: E890. doi: 10.3390/ijms19030890.


Mass Spectrometry Approaches to Glycomic and Glycoproteomic Analyses.

Ruhaak LR, Xu G, Li Q, Goonatilleke E, Lebrilla CB.

Chem Rev. 2018 Sep 12;118(17):7886-7930. doi: 10.1021/acs.chemrev.7b00732. Epub 2018 Mar 19. Review.


Genetic Ablation of Butyrate Utilization Attenuates Gastrointestinal Salmonella Disease.

Bronner DN, Faber F, Olsan EE, Byndloss MX, Sayed NA, Xu G, Yoo W, Kim D, Ryu S, Lebrilla CB, Bäumler AJ.

Cell Host Microbe. 2018 Feb 14;23(2):266-273.e4. doi: 10.1016/j.chom.2018.01.004.


Purification, characterization, and N-glycosylation of recombinant butyrylcholinesterase from transgenic rice cell suspension cultures.

Corbin JM, Kailemia MJ, Cadieux CL, Alkanaimsh S, Karuppanan K, Rodriguez RL, Lebrilla CB, Cerasoli DM, McDonald KA, Nandi S.

Biotechnol Bioeng. 2018 May;115(5):1301-1310. doi: 10.1002/bit.26557. Epub 2018 Feb 27.


Biallelic Mutations in FUT8 Cause a Congenital Disorder of Glycosylation with Defective Fucosylation.

Ng BG, Xu G, Chandy N, Steyermark J, Shinde DN, Radtke K, Raymond K, Lebrilla CB, AlAsmari A, Suchy SF, Powis Z, Faqeih EA, Berry SA, Kronn DF, Freeze HH.

Am J Hum Genet. 2018 Jan 4;102(1):188-195. doi: 10.1016/j.ajhg.2017.12.009.


Persistence of Supplemented Bifidobacterium longum subsp. infantis EVC001 in Breastfed Infants.

Frese SA, Hutton AA, Contreras LN, Shaw CA, Palumbo MC, Casaburi G, Xu G, Davis JCC, Lebrilla CB, Henrick BM, Freeman SL, Barile D, German JB, Mills DA, Smilowitz JT, Underwood MA.

mSphere. 2017 Dec 6;2(6). pii: e00501-17. doi: 10.1128/mSphere.00501-17. eCollection 2017 Nov-Dec.


Serum glycosylation characterization of osteonecrosis of the femoral head by mass spectrometry.

Song T, Chen P, Stroble C, Ruhaak LR, Wang H, Li Z, He W, Lebrilla CB.

Eur J Mass Spectrom (Chichester). 2018 Feb;24(1):178-187. doi: 10.1177/1469066717740010. Epub 2017 Dec 9.


Targeted Measurements of O- and N-Glycopeptides Show That Proteins in High Density Lipoprotein Particles Are Enriched with Specific Glycosylation Compared to Plasma.

Kailemia MJ, Wei W, Nguyen K, Beals E, Sawrey-Kubicek L, Rhodes C, Zhu C, Sacchi R, Zivkovic AM, Lebrilla CB.

J Proteome Res. 2018 Feb 2;17(2):834-845. doi: 10.1021/acs.jproteome.7b00604. Epub 2017 Dec 27.


Multiple Reaction Monitoring for the Quantitation of Serum Protein Glycosylation Profiles: Application to Ovarian Cancer.

Miyamoto S, Stroble CD, Taylor S, Hong Q, Lebrilla CB, Leiserowitz GS, Kim K, Ruhaak LR.

J Proteome Res. 2018 Jan 5;17(1):222-233. doi: 10.1021/acs.jproteome.7b00541. Epub 2017 Dec 19.


Revisiting monosaccharide analysis - quantitation of a comprehensive set of monosaccharides using dynamic multiple reaction monitoring.

Xu G, Amicucci MJ, Cheng Z, Galermo AG, Lebrilla CB.

Analyst. 2017 Dec 18;143(1):200-207. doi: 10.1039/c7an01530e.


Recent Advances in the Mass Spectrometry Methods for Glycomics and Cancer.

Kailemia MJ, Xu G, Wong M, Li Q, Goonatilleke E, Leon F, Lebrilla CB.

Anal Chem. 2018 Jan 2;90(1):208-224. doi: 10.1021/acs.analchem.7b04202. Epub 2017 Oct 31. Review. No abstract available.


Digestion of Human Milk Oligosaccharides by Bifidobacterium breve in the Premature Infant.

Underwood MA, Davis JCC, Kalanetra KM, Gehlot S, Patole S, Tancredi DJ, Mills DA, Lebrilla CB, Simmer K.

J Pediatr Gastroenterol Nutr. 2017 Oct;65(4):449-455. doi: 10.1097/MPG.0000000000001590.


Microbiota-activated PPAR-γ signaling inhibits dysbiotic Enterobacteriaceae expansion.

Byndloss MX, Olsan EE, Rivera-Chávez F, Tiffany CR, Cevallos SA, Lokken KL, Torres TP, Byndloss AJ, Faber F, Gao Y, Litvak Y, Lopez CA, Xu G, Napoli E, Giulivi C, Tsolis RM, Revzin A, Lebrilla CB, Bäumler AJ.

Science. 2017 Aug 11;357(6351):570-575. doi: 10.1126/science.aam9949.


Lipid-Based Nutrient Supplements During Pregnancy and Lactation Did Not Affect Human Milk Oligosaccharides and Bioactive Proteins in a Randomized Trial.

Jorgensen JM, Arnold C, Ashorn P, Ashorn U, Chaima D, Cheung YB, Davis JC, Fan YM, Goonatilleke E, Kortekangas E, Kumwenda C, Lebrilla CB, Maleta K, Totten SM, Wu LD, Dewey KG.

J Nutr. 2017 Aug 9. pii: jn252981. doi: 10.3945/jn.117.252981. [Epub ahead of print]


Composition and Variation of Macronutrients, Immune Proteins, and Human Milk Oligosaccharides in Human Milk From Nonprofit and Commercial Milk Banks.

Meredith-Dennis L, Xu G, Goonatilleke E, Lebrilla CB, Underwood MA, Smilowitz JT.

J Hum Lact. 2018 Feb;34(1):120-129. doi: 10.1177/0890334417710635. Epub 2017 Jun 14.


Enterocyte glycosylation is responsive to changes in extracellular conditions: implications for membrane functions.

Park D, Xu G, Barboza M, Shah IM, Wong M, Raybould H, Mills DA, Lebrilla CB.

Glycobiology. 2017 Sep 1;27(9):847-860. doi: 10.1093/glycob/cwx041.


HDL Glycoprotein Composition and Site-Specific Glycosylation Differentiates Between Clinical Groups and Affects IL-6 Secretion in Lipopolysaccharide-Stimulated Monocytes.

Krishnan S, Shimoda M, Sacchi R, Kailemia MJ, Luxardi G, Kaysen GA, Parikh AN, Ngassam VN, Johansen K, Chertow GM, Grimes B, Smilowitz JT, Maverakis E, Lebrilla CB, Zivkovic AM.

Sci Rep. 2017 Mar 13;7:43728. doi: 10.1038/srep43728.


Resolving the micro-heterogeneity and structural integrity of monoclonal antibodies by hybrid mass spectrometric approaches.

Yang Y, Wang G, Song T, Lebrilla CB, Heck AJR.

MAbs. 2017 May/Jun;9(4):638-645. doi: 10.1080/19420862.2017.1290033. Epub 2017 Feb 14.


Growth and Morbidity of Gambian Infants are Influenced by Maternal Milk Oligosaccharides and Infant Gut Microbiota.

Davis JC, Lewis ZT, Krishnan S, Bernstein RM, Moore SE, Prentice AM, Mills DA, Lebrilla CB, Zivkovic AM.

Sci Rep. 2017 Jan 12;7:40466. doi: 10.1038/srep40466.


Expression, Purification, and Biophysical Characterization of a Secreted Anthrax Decoy Fusion Protein in Nicotiana benthamiana.

Karuppanan K, Duhra-Gill S, Kailemia MJ, Phu ML, Lebrilla CB, Dandekar AM, Rodriguez RL, Nandi S, McDonald KA.

Int J Mol Sci. 2017 Jan 4;18(1). pii: E89. doi: 10.3390/ijms18010089.


Absolute Quantitation of Human Milk Oligosaccharides Reveals Phenotypic Variations during Lactation.

Xu G, Davis JC, Goonatilleke E, Smilowitz JT, German JB, Lebrilla CB.

J Nutr. 2017 Jan;147(1):117-124. doi: 10.3945/jn.116.238279. Epub 2016 Oct 19.


Quantitation of human milk proteins and their glycoforms using multiple reaction monitoring (MRM).

Huang J, Kailemia MJ, Goonatilleke E, Parker EA, Hong Q, Sabia R, Smilowitz JT, German JB, Lebrilla CB.

Anal Bioanal Chem. 2017 Jan;409(2):589-606. doi: 10.1007/s00216-016-0029-4. Epub 2016 Oct 29.


A novel gene cluster allows preferential utilization of fucosylated milk oligosaccharides in Bifidobacterium longum subsp. longum SC596.

Garrido D, Ruiz-Moyano S, Kirmiz N, Davis JC, Totten SM, Lemay DG, Ugalde JA, German JB, Lebrilla CB, Mills DA.

Sci Rep. 2016 Oct 19;6:35045. doi: 10.1038/srep35045.


Salmonella Typhimurium Enzymatically Landscapes the Host Intestinal Epithelial Cell (IEC) Surface Glycome to Increase Invasion.

Park D, Arabyan N, Williams CC, Song T, Mitra A, Weimer BC, Maverakis E, Lebrilla CB.

Mol Cell Proteomics. 2016 Dec;15(12):3653-3664. Epub 2016 Oct 17.

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