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Items: 33

1.

Form III RubisCO-mediated transaldolase variant of the Calvin cycle in a chemolithoautotrophic bacterium.

Frolov EN, Kublanov IV, Toshchakov SV, Lunev EA, Pimenov NV, Bonch-Osmolovskaya EA, Lebedinsky AV, Chernyh NA.

Proc Natl Acad Sci U S A. 2019 Sep 10;116(37):18638-18646. doi: 10.1073/pnas.1904225116. Epub 2019 Aug 26.

PMID:
31451656
2.

Genomic Insights Into Energy Metabolism of Carboxydocella thermautotrophica Coupling Hydrogenogenic CO Oxidation With the Reduction of Fe(III) Minerals.

Toshchakov SV, Lebedinsky AV, Sokolova TG, Zavarzina DG, Korzhenkov AA, Teplyuk AV, Chistyakova NI, Rusakov VS, Bonch-Osmolovskaya EA, Kublanov IV, Gavrilov SN.

Front Microbiol. 2018 Aug 3;9:1759. doi: 10.3389/fmicb.2018.01759. eCollection 2018.

3.

Hydrogenogenic and Sulfidogenic Growth of Thermococcus Archaea on Carbon Monoxide and Formate.

Kozhevnikova DA, Taranov EA, Lebedinsky AV, Bonch-Osmolovskaya EA, Sokolova TG.

Mikrobiologiia. 2016 Jul;85(4):381-392.

PMID:
28853770
4.

Genomic Analysis of Caldithrix abyssi, the Thermophilic Anaerobic Bacterium of the Novel Bacterial Phylum Calditrichaeota.

Kublanov IV, Sigalova OM, Gavrilov SN, Lebedinsky AV, Rinke C, Kovaleva O, Chernyh NA, Ivanova N, Daum C, Reddy TB, Klenk HP, Spring S, Göker M, Reva ON, Miroshnichenko ML, Kyrpides NC, Woyke T, Gelfand MS, Bonch-Osmolovskaya EA.

Front Microbiol. 2017 Feb 20;8:195. doi: 10.3389/fmicb.2017.00195. eCollection 2017.

5.

Thermodesulfobium acidiphilum sp. nov., a thermoacidophilic, sulfate-reducing, chemoautotrophic bacterium from a thermal site.

Frolov EN, Kublanov IV, Toshchakov SV, Samarov NI, Novikov AA, Lebedinsky AV, Bonch-Osmolovskaya EA, Chernyh NA.

Int J Syst Evol Microbiol. 2017 May;67(5):1482-1485. doi: 10.1099/ijsem.0.001745. Epub 2017 May 24.

PMID:
27995866
6.

Complete Genome Sequence of the Hyperthermophilic and Piezophilic Archaeon Thermococcus barophilus Ch5, Capable of Growth at the Expense of Hydrogenogenesis from Carbon Monoxide and Formate.

Oger P, Sokolova TG, Kozhevnikova DA, Taranov EA, Vannier P, Lee HS, Kwon KK, Kang SG, Lee JH, Bonch-Osmolovskaya EA, Lebedinsky AV.

Genome Announc. 2016 Jan 14;4(1). pii: e01534-15. doi: 10.1128/genomeA.01534-15.

7.

Reclassification of Desulfurococcus mobilis as a synonym of Desulfurococcus mucosus, Desulfurococcus fermentans and Desulfurococcus kamchatkensis as synonyms of Desulfurococcus amylolyticus, and emendation of the D. mucosus and D. amylolyticus species descriptions.

Perevalova AA, Kublanov IV, Bidzhieva SKh, Mukhopadhyay B, Bonch-Osmolovskaya EA, Lebedinsky AV.

Int J Syst Evol Microbiol. 2016 Jan;66(1):514-7. doi: 10.1099/ijsem.0.000747. Epub 2015 Nov 6.

PMID:
26596623
8.

Analysis of three genomes within the thermophilic bacterial species Caldanaerobacter subterraneus with a focus on carbon monoxide dehydrogenase evolution and hydrolase diversity.

Sant'Anna FH, Lebedinsky AV, Sokolova TG, Robb FT, Gonzalez JM.

BMC Genomics. 2015 Oct 7;16:757. doi: 10.1186/s12864-015-1955-9.

9.

Microbial life in Bourlyashchy, the hottest thermal pool of Uzon Caldera, Kamchatka.

Chernyh NA, Mardanov AV, Gumerov VM, Miroshnichenko ML, Lebedinsky AV, Merkel AY, Crowe D, Pimenov NV, Rusanov II, Ravin NV, Moran MA, Bonch-Osmolovskaya EA.

Extremophiles. 2015 Nov;19(6):1157-71. doi: 10.1007/s00792-015-0787-5. Epub 2015 Sep 8.

PMID:
26349929
10.

Pyrobaculum ferrireducens sp. nov., a hyperthermophilic Fe(III)-, selenate- and arsenate-reducing crenarchaeon isolated from a hot spring.

Slobodkina GB, Lebedinsky AV, Chernyh NA, Bonch-Osmolovskaya EA, Slobodkin AI.

Int J Syst Evol Microbiol. 2015 Mar;65(Pt 3):851-6. doi: 10.1099/ijs.0.000027. Epub 2014 Dec 15.

PMID:
25510975
11.

Genome analyses of the carboxydotrophic sulfate-reducers Desulfotomaculum nigrificans and Desulfotomaculum carboxydivorans and reclassification of Desulfotomaculum caboxydivorans as a later synonym of Desulfotomaculum nigrificans.

Visser M, Parshina SN, Alves JI, Sousa DZ, Pereira IA, Muyzer G, Kuever J, Lebedinsky AV, Koehorst JJ, Worm P, Plugge CM, Schaap PJ, Goodwin LA, Lapidus A, Kyrpides NC, Detter JC, Woyke T, Chain P, Davenport KW, Spring S, Rohde M, Klenk HP, Stams AJ.

Stand Genomic Sci. 2014 Mar 1;9(3):655-75. doi: 10.4056/sigs.4718645. eCollection 2014 Jun 15.

12.

Analysis of the complete genome of Fervidococcus fontis confirms the distinct phylogenetic position of the order Fervidicoccales and suggests its environmental function.

Lebedinsky AV, Mardanov AV, Kublanov IV, Gumerov VM, Beletsky AV, Perevalova AA, Bidzhieva SKh, Bonch-Osmolovskaya EA, Skryabin KG, Ravin NV.

Extremophiles. 2014 Mar;18(2):295-309. doi: 10.1007/s00792-013-0616-7. Epub 2013 Dec 24.

PMID:
24366681
13.

Detection of putatively thermophilic anaerobic methanotrophs in diffuse hydrothermal vent fluids.

Merkel AY, Huber JA, Chernyh NA, Bonch-Osmolovskaya EA, Lebedinsky AV.

Appl Environ Microbiol. 2013 Feb;79(3):915-23. doi: 10.1128/AEM.03034-12. Epub 2012 Nov 26.

14.

Evidence for horizontal gene transfer of anaerobic carbon monoxide dehydrogenases.

Techtmann SM, Lebedinsky AV, Colman AS, Sokolova TG, Woyke T, Goodwin L, Robb FT.

Front Microbiol. 2012 Apr 17;3:132. doi: 10.3389/fmicb.2012.00132. eCollection 2012.

15.

Complete genome sequence of the hyperthermophilic archaeon Thermococcus sp. strain AM4, capable of organotrophic growth and growth at the expense of hydrogenogenic or sulfidogenic oxidation of carbon monoxide.

Oger P, Sokolova TG, Kozhevnikova DA, Chernyh NA, Bartlett DH, Bonch-Osmolovskaya EA, Lebedinsky AV.

J Bacteriol. 2011 Dec;193(24):7019-20. doi: 10.1128/JB.06259-11.

16.

Anaerobic transformation of carbon monoxide by microbial communities of Kamchatka hot springs.

Kochetkova TV, Rusanov II, Pimenov NV, Kolganova TV, Lebedinsky AV, Bonch-Osmolovskaya EA, Sokolova TG.

Extremophiles. 2011 May;15(3):319-25. doi: 10.1007/s00792-011-0362-7. Epub 2011 Mar 9.

PMID:
21387195
17.

Carboxydothermus islandicus sp. nov., a thermophilic, hydrogenogenic, carboxydotrophic bacterium isolated from a hot spring.

Novikov AA, Sokolova TG, Lebedinsky AV, Kolganova TV, Bonch-Osmolovskaya EA.

Int J Syst Evol Microbiol. 2011 Oct;61(Pt 10):2532-7. doi: 10.1099/ijs.0.030288-0. Epub 2010 Dec 3.

PMID:
21131500
18.

Formate-driven growth coupled with H(2) production.

Kim YJ, Lee HS, Kim ES, Bae SS, Lim JK, Matsumi R, Lebedinsky AV, Sokolova TG, Kozhevnikova DA, Cha SS, Kim SJ, Kwon KK, Imanaka T, Atomi H, Bonch-Osmolovskaya EA, Lee JH, Kang SG.

Nature. 2010 Sep 16;467(7313):352-5. doi: 10.1038/nature09375.

PMID:
20844539
19.

Identification of a novel class of membrane-bound [NiFe]-hydrogenases in Thermococcus onnurineus NA1 by in silico analysis.

Lim JK, Kang SG, Lebedinsky AV, Lee JH, Lee HS.

Appl Environ Microbiol. 2010 Sep;76(18):6286-9. doi: 10.1128/AEM.00123-10. Epub 2010 Jul 23.

20.

Fervidicoccus fontis gen. nov., sp. nov., an anaerobic, thermophilic crenarchaeote from terrestrial hot springs, and proposal of Fervidicoccaceae fam. nov. and Fervidicoccales ord. nov.

Perevalova AA, Bidzhieva SKh, Kublanov IV, Hinrichs KU, Liu XL, Mardanov AV, Lebedinsky AV, Bonch-Osmolovskaya EA.

Int J Syst Evol Microbiol. 2010 Sep;60(Pt 9):2082-8. doi: 10.1099/ijs.0.019042-0. Epub 2009 Oct 16.

PMID:
19837732
21.

Isolation of the anaerobic thermoacidophilic crenarchaeote Acidilobus saccharovorans sp. nov. and proposal of Acidilobales ord. nov., including Acidilobaceae fam. nov. and Caldisphaeraceae fam. nov.

Prokofeva MI, Kostrikina NA, Kolganova TV, Tourova TP, Lysenko AM, Lebedinsky AV, Bonch-Osmolovskaya EA.

Int J Syst Evol Microbiol. 2009 Dec;59(Pt 12):3116-22. doi: 10.1099/ijs.0.010355-0. Epub 2009 Jul 30.

PMID:
19643887
22.

Diversity and ecophysiological features of thermophilic carboxydotrophic anaerobes.

Sokolova TG, Henstra AM, Sipma J, Parshina SN, Stams AJ, Lebedinsky AV.

FEMS Microbiol Ecol. 2009 May;68(2):131-41. doi: 10.1111/j.1574-6941.2009.00663.x. Review.

23.

Caldimicrobium rimae gen. nov., sp. nov., an extremely thermophilic, facultatively lithoautotrophic, anaerobic bacterium from the Uzon Caldera, Kamchatka.

Miroshnichenko ML, Lebedinsky AV, Chernyh NA, Tourova TP, Kolganova TV, Spring S, Bonch-Osmolovskaya EA.

Int J Syst Evol Microbiol. 2009 May;59(Pt 5):1040-4. doi: 10.1099/ijs.0.006072-0.

PMID:
19406789
24.

Complete genome sequence of the anaerobic, protein-degrading hyperthermophilic crenarchaeon Desulfurococcus kamchatkensis.

Ravin NV, Mardanov AV, Beletsky AV, Kublanov IV, Kolganova TV, Lebedinsky AV, Chernyh NA, Bonch-Osmolovskaya EA, Skryabin KG.

J Bacteriol. 2009 Apr;191(7):2371-9. doi: 10.1128/JB.01525-08. Epub 2008 Dec 29.

25.

Biodiversity of thermophilic prokaryotes with hydrolytic activities in hot springs of Uzon Caldera, Kamchatka (Russia).

Kublanov IV, Perevalova AA, Slobodkina GB, Lebedinsky AV, Bidzhieva SK, Kolganova TV, Kaliberda EN, Rumsh LD, Haertlé T, Bonch-Osmolovskaya EA.

Appl Environ Microbiol. 2009 Jan;75(1):286-91. doi: 10.1128/AEM.00607-08. Epub 2008 Oct 31.

26.

Distribution of Crenarchaeota representatives in terrestrial hot springs of Russia and Iceland.

Perevalova AA, Kolganova TV, Birkeland NK, Schleper C, Bonch-Osmolovskaya EA, Lebedinsky AV.

Appl Environ Microbiol. 2008 Dec;74(24):7620-8. doi: 10.1128/AEM.00972-08. Epub 2008 Oct 10.

27.

Phylogenetic systematics of microorganisms inhabiting thermal environments.

Lebedinsky AV, Chernyh NA, Bonch-Osmolovskaya EA.

Biochemistry (Mosc). 2007 Dec;72(12):1299-312. Review.

28.

Cultivated anaerobic acidophilic/acidotolerant thermophiles from terrestrial and deep-sea hydrothermal habitats.

Prokofeva MI, Kublanov IV, Nercessian O, Tourova TP, Kolganova TV, Lebedinsky AV, Bonch-Osmolovskaya EA, Spring S, Jeanthon C.

Extremophiles. 2005 Dec;9(6):437-48. Epub 2005 Jun 22.

PMID:
15970992
29.

PCR-based identification of hyperthermophilic archaea of the family Thermococcaceae.

Slobodkina GB, Chernyh NA, Slobodkin AI, Subbotina IV, Bonch-Osmolovskaya EA, Lebedinsky AV.

Appl Environ Microbiol. 2004 Sep;70(9):5701-3.

30.

The first evidence of anaerobic CO oxidation coupled with H2 production by a hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent.

Sokolova TG, Jeanthon C, Kostrikina NA, Chernyh NA, Lebedinsky AV, Stackebrandt E, Bonch-Osmolovskaya EA.

Extremophiles. 2004 Aug;8(4):317-23. Epub 2004 May 26.

PMID:
15164268
31.

Radioisotopic, culture-based, and oligonucleotide microchip analyses of thermophilic microbial communities in a continental high-temperature petroleum reservoir.

Bonch-Osmolovskaya EA, Miroshnichenko ML, Lebedinsky AV, Chernyh NA, Nazina TN, Ivoilov VS, Belyaev SS, Boulygina ES, Lysov YP, Perov AN, Mirzabekov AD, Hippe H, Stackebrandt E, L'Haridon S, Jeanthon C.

Appl Environ Microbiol. 2003 Oct;69(10):6143-51.

32.

The biological effect of small doses of ionizing radiation.

LEBEDINSKY AV, GRIGORYEV UG, DEMIRCHORGLIAN GG.

Prog Nucl Energy 6 Biol Sci. 1959;2:300-20. No abstract available.

PMID:
24546422
33.

[Action of novocaine in the effect produced on the pupil of the rabbit by stimulating the trigeminus].

ZIMKIN NV, LEBEDINSKY AV.

Fiziol Zh SSSR Im I M Sechenova. 1946;32(2):163-8. Undetermined Language. No abstract available.

PMID:
20283190

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