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Items: 41

1.

Past the climate optimum: Recruitment is declining at the world's highest juniper shrublines on the Tibetan Plateau.

Lu X, Liang E, Wang Y, Babst F, Leavitt SW, Julio Camarero J.

Ecology. 2018 Nov 9. doi: 10.1002/ecy.2557. [Epub ahead of print]

PMID:
30411785
2.

Phylogenetic study and taxonomic revision of the Xanthoparmeliamexicana group, including the description of a new species (Parmeliaceae, Ascomycota).

Barcenas-Peña A, Leavitt SD, Huang JP, Grewe F, Lumbsch HT.

MycoKeys. 2018 Sep 18;(40):13-28. doi: 10.3897/mycokeys.40.26724. eCollection 2018.

3.

Disentangling seasonal and interannual legacies from inferred patterns of forest water and carbon cycling using tree-ring stable isotopes.

Szejner P, Wright WE, Belmecheri S, Meko D, Leavitt SW, Ehleringer JR, Monson RK.

Glob Chang Biol. 2018 Nov;24(11):5332-5347. doi: 10.1111/gcb.14395. Epub 2018 Aug 1.

PMID:
29999573
4.

Differences in xylogenesis between dominant and suppressed trees.

Liu S, Li X, Rossi S, Wang L, Li W, Liang E, Leavitt SW.

Am J Bot. 2018 May;105(5):950-956. doi: 10.1002/ajb2.1089. Epub 2018 Jun 6.

PMID:
29874391
5.

Testing the impact of effective population size on speciation rates - a negative correlation or lack thereof in lichenized fungi.

Huang JP, Leavitt SD, Lumbsch HT.

Sci Rep. 2018 Apr 10;8(1):5729. doi: 10.1038/s41598-018-24120-9.

6.

Multiple, Distinct Intercontinental Lineages but Isolation of Australian Populations in a Cosmopolitan Lichen-Forming Fungal Taxon, Psora decipiens (Psoraceae, Ascomycota).

Leavitt SD, Westberg M, Nelsen MP, Elix JA, Timdal E, Sohrabi M, St Clair LL, Williams L, Wedin M, Lumbsch HT.

Front Microbiol. 2018 Feb 23;9:283. doi: 10.3389/fmicb.2018.00283. eCollection 2018.

7.

Reference-based RADseq resolves robust relationships among closely related species of lichen-forming fungi using metagenomic DNA.

Grewe F, Huang JP, Leavitt SD, Lumbsch HT.

Sci Rep. 2017 Aug 29;7(1):9884. doi: 10.1038/s41598-017-09906-7.

8.

Recent enhancement of central Pacific El Niño variability relative to last eight centuries.

Liu Y, Cobb KM, Song H, Li Q, Li CY, Nakatsuka T, An Z, Zhou W, Cai Q, Li J, Leavitt SW, Sun C, Mei R, Shen CC, Chan MH, Sun J, Yan L, Lei Y, Ma Y, Li X, Chen D, Linderholm HW.

Nat Commun. 2017 May 30;8:15386. doi: 10.1038/ncomms15386.

9.

A temporal banding approach for consistent taxonomic ranking above the species level.

Kraichak E, Crespo A, Divakar PK, Leavitt SD, Lumbsch HT.

Sci Rep. 2017 May 23;7(1):2297. doi: 10.1038/s41598-017-02477-7.

10.

Limitations of Species Delimitation Based on Phylogenetic Analyses: A Case Study in the Hypogymnia hypotrypa Group (Parmeliaceae, Ascomycota).

Wei X, McCune B, Lumbsch HT, Li H, Leavitt S, Yamamoto Y, Tchabanenko S, Wei J.

PLoS One. 2016 Nov 9;11(11):e0163664. doi: 10.1371/journal.pone.0163664. eCollection 2016.

11.

Hidden diversity before our eyes: Delimiting and describing cryptic lichen-forming fungal species in camouflage lichens (Parmeliaceae, Ascomycota).

Leavitt SD, Esslinger TL, Divakar PK, Crespo A, Lumbsch HT.

Fungal Biol. 2016 Nov;120(11):1374-1391. doi: 10.1016/j.funbio.2016.06.001.

PMID:
27742095
12.

Cryptic diversity and symbiont interactions in rock-posy lichens.

Leavitt SD, Kraichak E, Vondrak J, Nelsen MP, Sohrabi M, Perez-Ortega S, St Clair LL, Lumbsch HT.

Mol Phylogenet Evol. 2016 Jun;99:261-274. doi: 10.1016/j.ympev.2016.03.030. Epub 2016 Mar 24.

PMID:
27033947
13.

Resolving evolutionary relationships in lichen-forming fungi using diverse phylogenomic datasets and analytical approaches.

Leavitt SD, Grewe F, Widhelm T, Muggia L, Wray B, Lumbsch HT.

Sci Rep. 2016 Feb 26;6:22262. doi: 10.1038/srep22262.

14.

An Integrative Approach for Understanding Diversity in the Punctelia rudecta Species Complex (Parmeliaceae, Ascomycota).

Alors D, Lumbsch HT, Divakar PK, Leavitt SD, Crespo A.

PLoS One. 2016 Feb 10;11(2):e0146537. doi: 10.1371/journal.pone.0146537. eCollection 2016.

15.

A Molecular Phylogeny of the Lichen Genus Lecidella Focusing on Species from Mainland China.

Zhao X, Zhang LL, Zhao ZT, Wang WC, Leavitt SD, Lumbsch HT.

PLoS One. 2015 Sep 28;10(9):e0139405. doi: 10.1371/journal.pone.0139405. eCollection 2015.

16.

A dynamic leaf gas-exchange strategy is conserved in woody plants under changing ambient CO2 : evidence from carbon isotope discrimination in paleo and CO2 enrichment studies.

Voelker SL, Brooks JR, Meinzer FC, Anderson R, Bader MK, Battipaglia G, Becklin KM, Beerling D, Bert D, Betancourt JL, Dawson TE, Domec JC, Guyette RP, Körner C, Leavitt SW, Linder S, Marshall JD, Mildner M, Ogée J, Panyushkina I, Plumpton HJ, Pregitzer KS, Saurer M, Smith AR, Siegwolf RT, Stambaugh MC, Talhelm AF, Tardif JC, Van de Water PK, Ward JK, Wingate L.

Glob Chang Biol. 2016 Feb;22(2):889-902. doi: 10.1111/gcb.13102. Epub 2016 Jan 4.

PMID:
26391334
17.

Evolution of complex symbiotic relationships in a morphologically derived family of lichen-forming fungi.

Divakar PK, Crespo A, Wedin M, Leavitt SD, Hawksworth DL, Myllys L, McCune B, Randlane T, Bjerke JW, Ohmura Y, Schmitt I, Boluda CG, Alors D, Roca-Valiente B, Del-Prado R, Ruibal C, Buaruang K, Núñez-Zapata J, Amo de Paz G, Rico VJ, Molina MC, Elix JA, Esslinger TL, Tronstad IK, Lindgren H, Ertz D, Gueidan C, Saag L, Mark K, Singh G, Dal Grande F, Parnmen S, Beck A, Benatti MN, Blanchon D, Candan M, Clerc P, Goward T, Grube M, Hodkinson BP, Hur JS, Kantvilas G, Kirika PM, Lendemer J, Mattsson JE, Messuti MI, Miadlikowska J, Nelsen M, Ohlson JI, Pérez-Ortega S, Saag A, Sipman HJ, Sohrabi M, Thell A, Thor G, Truong C, Yahr R, Upreti DK, Cubas P, Lumbsch HT.

New Phytol. 2015 Dec;208(4):1217-26. doi: 10.1111/nph.13553. Epub 2015 Aug 24.

18.

Fungal specificity and selectivity for algae play a major role in determining lichen partnerships across diverse ecogeographic regions in the lichen-forming family Parmeliaceae (Ascomycota).

Leavitt SD, Kraichak E, Nelsen MP, Altermann S, Divakar PK, Alors D, Esslinger TL, Crespo A, Lumbsch T.

Mol Ecol. 2015 Jul;24(14):3779-97. doi: 10.1111/mec.13271. Epub 2015 Jul 14.

PMID:
26073165
19.

Who's getting around? Assessing species diversity and phylogeography in the widely distributed lichen-forming fungal genus Montanelia (Parmeliaceae, Ascomycota).

Leavitt SD, Divakar PK, Ohmura Y, Wang LS, Esslinger TL, Lumbsch HT.

Mol Phylogenet Evol. 2015 Sep;90:85-96. doi: 10.1016/j.ympev.2015.04.029. Epub 2015 May 16.

PMID:
25987532
20.

A Tale of Two Hyper-diversities: Diversification dynamics of the two largest families of lichenized fungi.

Kraichak E, Divakar PK, Crespo A, Leavitt SD, Nelsen MP, Lücking R, Lumbsch HT.

Sci Rep. 2015 May 6;5:10028. doi: 10.1038/srep10028.

21.

Coalescent-based species delimitation approach uncovers high cryptic diversity in the cosmopolitan lichen-forming fungal genus Protoparmelia (Lecanorales, Ascomycota).

Singh G, Dal Grande F, Divakar PK, Otte J, Leavitt SD, Szczepanska K, Crespo A, Rico VJ, Aptroot A, Cáceres ME, Lumbsch HT, Schmitt I.

PLoS One. 2015 May 1;10(5):e0124625. doi: 10.1371/journal.pone.0124625. eCollection 2015.

22.

Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi.

Schoch CL, Robbertse B, Robert V, Vu D, Cardinali G, Irinyi L, Meyer W, Nilsson RH, Hughes K, Miller AN, Kirk PM, Abarenkov K, Aime MC, Ariyawansa HA, Bidartondo M, Boekhout T, Buyck B, Cai Q, Chen J, Crespo A, Crous PW, Damm U, De Beer ZW, Dentinger BT, Divakar PK, Dueñas M, Feau N, Fliegerova K, García MA, Ge ZW, Griffith GW, Groenewald JZ, Groenewald M, Grube M, Gryzenhout M, Gueidan C, Guo L, Hambleton S, Hamelin R, Hansen K, Hofstetter V, Hong SB, Houbraken J, Hyde KD, Inderbitzin P, Johnston PR, Karunarathna SC, Kõljalg U, Kovács GM, Kraichak E, Krizsan K, Kurtzman CP, Larsson KH, Leavitt S, Letcher PM, Liimatainen K, Liu JK, Lodge DJ, Luangsa-ard JJ, Lumbsch HT, Maharachchikumbura SS, Manamgoda D, Martín MP, Minnis AM, Moncalvo JM, Mulè G, Nakasone KK, Niskanen T, Olariaga I, Papp T, Petkovits T, Pino-Bodas R, Powell MJ, Raja HA, Redecker D, Sarmiento-Ramirez JM, Seifert KA, Shrestha B, Stenroos S, Stielow B, Suh SO, Tanaka K, Tedersoo L, Telleria MT, Udayanga D, Untereiner WA, Diéguez Uribeondo J, Subbarao KV, Vágvölgyi C, Visagie C, Voigt K, Walker DM, Weir BS, Weiß M, Wijayawardene NN, Wingfield MJ, Xu JP, Yang ZL, Zhang N, Zhuang WY, Federhen S.

Database (Oxford). 2014 Jun 30;2014. pii: bau061. doi: 10.1093/database/bau061. Print 2014.

23.

In vitro evaluation of the antibacterial activity of extracts from 34 species of North American lichens.

Shrestha G, Raphael J, Leavitt SD, St Clair LL.

Pharm Biol. 2014 Oct;52(10):1262-6. doi: 10.3109/13880209.2014.889175. Epub 2014 May 27.

PMID:
24863278
24.

How do you solve a problem like Letharia? A new look at cryptic species in lichen-forming fungi using Bayesian clustering and SNPs from multilocus sequence data.

Altermann S, Leavitt SD, Goward T, Nelsen MP, Lumbsch HT.

PLoS One. 2014 May 15;9(5):e97556. doi: 10.1371/journal.pone.0097556. eCollection 2014.

25.

Pleistocene speciation in North American lichenized fungi and the impact of alternative species circumscriptions and rates of molecular evolution on divergence estimates.

Leavitt SD, Lumbsch HT, Stenroos S, St Clair LL.

PLoS One. 2013 Dec 26;8(12):e85240. doi: 10.1371/journal.pone.0085240. eCollection 2013.

26.

Understanding phenotypical character evolution in parmelioid lichenized fungi (Parmeliaceae, Ascomycota).

Divakar PK, Kauff F, Crespo A, Leavitt SD, Lumbsch HT.

PLoS One. 2013 Nov 29;8(11):e83115. doi: 10.1371/journal.pone.0083115. eCollection 2013.

27.

Diversification of the newly recognized lichen-forming fungal lineage Montanelia (Parmeliaceae, Ascomycota) and its relation to key geological and climatic events.

Divakar PK, Del-Prado R, Lumbsch HT, Wedin M, Esslinger TL, Leavitt SD, Crespo A.

Am J Bot. 2012 Dec;99(12):2014-26. doi: 10.3732/ajb.1200258. Epub 2012 Nov 30.

28.

Neogene-dominated diversification in neotropical montane lichens: dating divergence events in the lichen-forming fungal genus Oropogon (Parmeliaceae).

Leavitt SD, Esslinger TL, Lumbsch HT.

Am J Bot. 2012 Nov;99(11):1764-77. doi: 10.3732/ajb.1200146. Epub 2012 Oct 23.

29.

Multilocus phylogeny of the lichen-forming fungal genus Melanohalea (Parmeliaceae, Ascomycota): insights on diversity, distributions, and a comparison of species tree and concatenated topologies.

Leavitt SD, Esslinger TL, Spribille T, Divakar PK, Thorsten Lumbsch H.

Mol Phylogenet Evol. 2013 Jan;66(1):138-52. doi: 10.1016/j.ympev.2012.09.013. Epub 2012 Sep 24.

PMID:
23017822
30.

Miocene and Pliocene dominated diversification of the lichen-forming fungal genus Melanohalea (Parmeliaceae, Ascomycota) and Pleistocene population expansions.

Leavitt SD, Esslinger TL, Divakar PK, Lumbsch HT.

BMC Evol Biol. 2012 Sep 11;12:176. doi: 10.1186/1471-2148-12-176.

31.

Species delimitation in taxonomically difficult lichen-forming fungi: an example from morphologically and chemically diverse Xanthoparmelia (Parmeliaceae) in North America.

Leavitt SD, Johnson LA, Goward T, St Clair LL.

Mol Phylogenet Evol. 2011 Sep;60(3):317-32. doi: 10.1016/j.ympev.2011.05.012. Epub 2011 May 25.

PMID:
21627994
32.
33.

Increase in water-use efficiency and underlying processes in pine forests across a precipitation gradient in the dry Mediterranean region over the past 30 years.

Maseyk K, Hemming D, Angert A, Leavitt SW, Yakir D.

Oecologia. 2011 Oct;167(2):573-85. doi: 10.1007/s00442-011-2010-4. Epub 2011 May 18.

PMID:
21590331
34.

Complex patterns of speciation in cosmopolitan "rock posy" lichens--discovering and delimiting cryptic fungal species in the lichen-forming Rhizoplaca melanophthalma species-complex (Lecanoraceae, Ascomycota).

Leavitt SD, Fankhauser JD, Leavitt DH, Porter LD, Johnson LA, St Clair LL.

Mol Phylogenet Evol. 2011 Jun;59(3):587-602. doi: 10.1016/j.ympev.2011.03.020. Epub 2011 Apr 1.

PMID:
21443956
35.

Forest responses to increasing aridity and warmth in the southwestern United States.

Williams AP, Allen CD, Millar CI, Swetnam TW, Michaelsen J, Still CJ, Leavitt SW.

Proc Natl Acad Sci U S A. 2010 Dec 14;107(50):21289-94. doi: 10.1073/pnas.0914211107. Epub 2010 Dec 13.

36.

Tree-ring C-H-O isotope variability and sampling.

Leavitt SW.

Sci Total Environ. 2010 Oct 15;408(22):5244-53. doi: 10.1016/j.scitotenv.2010.07.057. Epub 2010 Aug 16. Review.

PMID:
20719360
37.

The influence of summertime fog and overcast clouds on the growth of a coastal Californian pine: a tree-ring study.

Williams AP, Still CJ, Fischer DT, Leavitt SW.

Oecologia. 2008 Jun;156(3):601-11. doi: 10.1007/s00442-008-1025-y. Epub 2008 Mar 27.

PMID:
18368424
38.

Consequences of a rapid cellulose extraction technique for oxygen isotope and radiocarbon analyses.

Anchukaitis KJ, Evans MN, Lange T, Smith DR, Leavitt SW, Schrag DP.

Anal Chem. 2008 Mar 15;80(6):2035-41. doi: 10.1021/ac7020272. Epub 2008 Feb 23.

PMID:
18293945
39.

Needle cell elongation and maturation timing derived from pine needle cellulose delta18O.

Wright WE, Leavitt SW.

Plant Cell Environ. 2006 Jan;29(1):1-14.

40.

Comparison of measured and modeled variations in piñon pine leaf water isotopic enrichment across a summer moisture gradient.

Pendall E, Williams DG, Leavitt SW.

Oecologia. 2005 Oct;145(4):605-18. Epub 2005 Oct 13.

PMID:
16012819
41.

Leaf δ13C variability with elevation, slope aspect, and precipitation in the southwest United States.

Van de Water PK, Leavitt SW, Betancourt JL.

Oecologia. 2002 Aug;132(3):332-343. doi: 10.1007/s00442-002-0973-x. Epub 2002 Aug 1.

PMID:
28547410

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