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Items: 1 to 50 of 73

1.

Clinical prognostic models for severe dengue: a systematic review protocol.

Dao Phuoc T, Khuong Quynh L, Vien Dang Khanh L, Ong Phuc T, Le Sy H, Le Ngoc T, Phung Khanh L.

Version 2. Wellcome Open Res. 2019 Aug 2 [revised 2019 Jan 1];4:12. doi: 10.12688/wellcomeopenres.15033.2. eCollection 2019.

2.

A mutation in GABRB3 associated with Dravet syndrome.

Le SV, Le PHT, Le TKV, Kieu Huynh TT, Hang Do TT.

Am J Med Genet A. 2017 Aug;173(8):2126-2131. doi: 10.1002/ajmg.a.38282. Epub 2017 May 24.

PMID:
28544625
3.

Wavelength conversion in a highly nonlinear chalcogenide microstructured fiber.

Le SD, Gay M, Bramerie L, Costa e Silva M, Lenglé K, Chartier T, Thual M, Simon JC, Brilland L, Méchin D, Toupin P, Troles J.

Opt Lett. 2012 Nov 15;37(22):4576-8.

4.

The extent of sequence complementarity correlates with the potency of cellular miRNA-mediated restriction of HIV-1.

Houzet L, Klase Z, Yeung ML, Wu A, Le SY, Quiñones M, Jeang KT.

Nucleic Acids Res. 2012 Dec;40(22):11684-96. doi: 10.1093/nar/gks912. Epub 2012 Oct 5.

5.

Modal decomposition technique for multimode fibers.

Nguyen DM, Blin S, Nguyen TN, Le SD, Provino L, Thual M, Chartier T.

Appl Opt. 2012 Feb 1;51(4):450-6. doi: 10.1364/AO.51.000450.

PMID:
22307114
6.

Efficient four-wave mixing in an ultra-highly nonlinear suspended-core chalcogenide As38Se62 fiber.

Le SD, Nguyen DM, Thual M, Bramerie L, Costa e Silva M, Lenglé K, Gay M, Chartier T, Brilland L, Méchin D, Toupin P, Troles J.

Opt Express. 2011 Dec 12;19(26):B653-60. doi: 10.1364/OE.19.00B653.

PMID:
22274084
7.

Stability of a long noncoding viral RNA depends on a 9-nt core element at the RNA 5' end to interact with viral ORF57 and cellular PABPC1.

Massimelli MJ, Kang JG, Majerciak V, Le SY, Liewehr DJ, Steinberg SM, Zheng ZM.

Int J Biol Sci. 2011;7(8):1145-60. Epub 2011 Oct 16.

8.

Two-tiered approach identifies a network of cancer and liver disease-related genes regulated by miR-122.

Boutz DR, Collins PJ, Suresh U, Lu M, Ramírez CM, Fernández-Hernando C, Huang Y, Abreu Rde S, Le SY, Shapiro BA, Liu AM, Luk JM, Aldred SF, Trinklein ND, Marcotte EM, Penalva LO.

J Biol Chem. 2011 May 20;286(20):18066-78. doi: 10.1074/jbc.M110.196451. Epub 2011 Mar 14.

9.

Kaposi's sarcoma-associated herpesvirus ORF57 promotes escape of viral and human interleukin-6 from microRNA-mediated suppression.

Kang JG, Pripuzova N, Majerciak V, Kruhlak M, Le SY, Zheng ZM.

J Virol. 2011 Mar;85(6):2620-30. doi: 10.1128/JVI.02144-10. Epub 2011 Jan 5.

10.

Sequence signatures and mRNA concentration can explain two-thirds of protein abundance variation in a human cell line.

Vogel C, Abreu Rde S, Ko D, Le SY, Shapiro BA, Burns SC, Sandhu D, Boutz DR, Marcotte EM, Penalva LO.

Mol Syst Biol. 2010 Aug 24;6:400. doi: 10.1038/msb.2010.59.

11.

Pyrosequencing of small non-coding RNAs in HIV-1 infected cells: evidence for the processing of a viral-cellular double-stranded RNA hybrid.

Yeung ML, Bennasser Y, Watashi K, Le SY, Houzet L, Jeang KT.

Nucleic Acids Res. 2009 Oct;37(19):6575-86. doi: 10.1093/nar/gkp707. Epub 2009 Sep 3.

12.

Genomic analyses of musashi1 downstream targets show a strong association with cancer-related processes.

de Sousa Abreu R, Sanchez-Diaz PC, Vogel C, Burns SC, Ko D, Burton TL, Vo DT, Chennasamudaram S, Le SY, Shapiro BA, Penalva LO.

J Biol Chem. 2009 May 1;284(18):12125-35. doi: 10.1074/jbc.M809605200. Epub 2009 Mar 3.

13.

The A-rich RNA sequences of HIV-1 pol are important for the synthesis of viral cDNA.

Keating CP, Hill MK, Hawkes DJ, Smyth RP, Isel C, Le SY, Palmenberg AC, Marshall JA, Marquet R, Nabel GJ, Mak J.

Nucleic Acids Res. 2009 Feb;37(3):945-56. doi: 10.1093/nar/gkn1015. Epub 2008 Dec 23.

14.

Aberrant expression of oncogenic and tumor-suppressive microRNAs in cervical cancer is required for cancer cell growth.

Wang X, Tang S, Le SY, Lu R, Rader JS, Meyers C, Zheng ZM.

PLoS One. 2008 Jul 2;3(7):e2557. doi: 10.1371/journal.pone.0002557.

15.

RNA-binding protein HuR interacts with thrombomodulin 5'untranslated region and represses internal ribosome entry site-mediated translation under IL-1 beta treatment.

Yeh CH, Hung LY, Hsu C, Le SY, Lee PT, Liao WL, Lin YT, Chang WC, Tseng JT.

Mol Biol Cell. 2008 Sep;19(9):3812-22. doi: 10.1091/mbc.E07-09-0962. Epub 2008 Jun 25.

16.

RNA interference and HIV-1.

Yeung ML, Bennasser Y, Le SY, Jeang KT.

Adv Pharmacol. 2007;55:427-38. Review. No abstract available.

PMID:
17586323
17.

Data mining of imperfect double-stranded RNA in 3' untranslated regions of eukaryotic mRNAs.

Le SY, Maizel JV Jr.

Biomol Eng. 2007 Sep;24(3):351-9. Epub 2007 Mar 3.

PMID:
17482872
18.

MicroRNAs in human immunodeficiency virus-1 infection.

Bennasser Y, Le SY, Yeung ML, Jeang KT.

Methods Mol Biol. 2006;342:241-53. Review.

PMID:
16957379
19.

Statistical inference for well-ordered structures in nucleotide sequences.

Le SY, Chen JH, Maize JV Jr.

Proc IEEE Comput Soc Bioinform Conf. 2003;2:190-6.

PMID:
16452793
20.

An algorithm for detecting homologues of known structured RNAs in genomes.

Le SY, Maizel JV Jr, Zhang K.

Proc IEEE Comput Syst Bioinform Conf. 2004:300-10.

PMID:
16448023
21.

siRNA, miRNA and HIV: promises and challenges.

Yeung ML, Bennasser Y, LE SY, Jeang KT.

Cell Res. 2005 Nov-Dec;15(11-12):935-46. Review.

22.

Evidence that HIV-1 encodes an siRNA and a suppressor of RNA silencing.

Bennasser Y, Le SY, Benkirane M, Jeang KT.

Immunity. 2005 May;22(5):607-19. Erratum in: Immunity. 2005 Jun;22(6):773.

23.

HIV-1 encoded candidate micro-RNAs and their cellular targets.

Bennasser Y, Le SY, Yeung ML, Jeang KT.

Retrovirology. 2004 Dec 15;1:43.

24.

Mapping and characterization of the minimal internal ribosome entry segment in the human c-myc mRNA 5' untranslated region.

Cencig S, Nanbru C, Le SY, Gueydan C, Huez G, Kruys V.

Oncogene. 2004 Jan 8;23(1):267-77.

PMID:
14712232
25.

The parathyroid hormone mRNA 3'-untranslated region AU-rich element is an unstructured functional element.

Kilav R, Bell O, Le SY, Silver J, Naveh-Many T.

J Biol Chem. 2004 Jan 16;279(3):2109-16. Epub 2003 Oct 29.

26.

Discovering well-ordered folding patterns in nucleotide sequences.

Le SY, Chen JH, Konings D, Maizel JV Jr.

Bioinformatics. 2003 Feb 12;19(3):354-61.

PMID:
12584120
27.

RNA molecules with structure dependent functions are uniquely folded.

Le SY, Zhang K, Maizel JV Jr.

Nucleic Acids Res. 2002 Aug 15;30(16):3574-82.

28.

Local thermodynamic stability scores are well represented by a non-central student's t distribution.

Le SY, Liu WM, Chen JH, Maizel JV Jr.

J Theor Biol. 2001 Jun 21;210(4):411-23.

PMID:
11403562
29.
30.

Thermo-debonding mechanisms in dentin bonding systems using finite element analysis.

Le SY, Chiang HC, Huang HM, Shih YH, Chen HC, Dong DR, Lin CT.

Biomaterials. 2001 Jan;22(2):113-23.

PMID:
11101156
31.

A gender-specific mRNA encoding a cytotoxic ribonuclease contains a 3' UTR of unusual length and structure.

Chen S, Le SY, Newton DL, Maizel JV Jr, Rybak SM.

Nucleic Acids Res. 2000 Jun 15;28(12):2375-82.

32.

Transcription-coupled translation control of AML1/RUNX1 is mediated by cap- and internal ribosome entry site-dependent mechanisms.

Pozner A, Goldenberg D, Negreanu V, Le SY, Elroy-Stein O, Levanon D, Groner Y.

Mol Cell Biol. 2000 Apr;20(7):2297-307.

33.

Prediction of common secondary structures of RNAs: a genetic algorithm approach.

Chen JH, Le SY, Maizel JV.

Nucleic Acids Res. 2000 Feb 15;28(4):991-9.

35.
36.

Ion-RNA interactions in the RNA pseudoknot of a ribosomal frameshifting site: molecular modeling studies.

Le SY, Chen JH, Pattabiraman N, Maizel JV Jr.

J Biomol Struct Dyn. 1998 Aug;16(1):1-11.

PMID:
9745889
37.
38.
39.

PDGF2/c-sis mRNA leader contains a differentiation-linked internal ribosomal entry site (D-IRES).

Bernstein J, Sella O, Le SY, Elroy-Stein O.

J Biol Chem. 1997 Apr 4;272(14):9356-62.

40.
41.
43.

Unusual folding regions and ribosome landing pad within hepatitis C virus and pestivirus RNAs.

Le SY, Sonenberg N, Maizel JV Jr.

Gene. 1995 Mar 10;154(2):137-43.

PMID:
7890155
44.

A method for predicting common structures of homologous RNAs.

Le SY, Zhang K, Maizel JV Jr.

Comput Biomed Res. 1995 Feb;28(1):53-66.

PMID:
7542191
45.
46.
47.
48.

Prediction of alternative RNA secondary structures based on fluctuating thermodynamic parameters.

Le SY, Chen JH, Maizel JV Jr.

Nucleic Acids Res. 1993 May 11;21(9):2173-8.

49.

Identification of unusual RNA folding patterns encoded by bacteriophage T4 gene 60.

Le SY, Chen JH, Maizel JV Jr.

Gene. 1993 Feb 14;124(1):21-8.

PMID:
8382655
50.

Conserved tertiary structure elements in the 5' untranslated region of human enteroviruses and rhinoviruses.

Le SY, Chen JH, Sonenberg N, Maizel JV.

Virology. 1992 Dec;191(2):858-66.

PMID:
1333125

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