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Items: 16


Minimal standards for the description of new genera and species of rhizobia and agrobacteria.

de Lajudie PM, Andrews M, Ardley J, Eardly B, Jumas-Bilak E, Kuzmanović N, Lassalle F, Lindström K, Mhamdi R, Martínez-Romero E, Moulin L, Mousavi SA, Nesme X, Peix A, Puławska J, Steenkamp E, Stępkowski T, Tian CF, Vinuesa P, Wei G, Willems A, Zilli J, Young P.

Int J Syst Evol Microbiol. 2019 May 29. doi: 10.1099/ijsem.0.003426. [Epub ahead of print]


The scavenger receptor SCARA5 is an endocytic receptor for von Willebrand factor expressed by littoral cells in the human spleen.

Swystun LL, Ogiwara K, Lai JD, Ojala JRM, Rawley O, Lassalle F, Notley C, Rengby O, Michels A, Nesbitt K, Tryggvason K, Lillicrap D.

J Thromb Haemost. 2019 May 24. doi: 10.1111/jth.14521. [Epub ahead of print]


Recurrent F8 and F9 gene variants result from a founder effect in two large French haemophilia cohorts.

Lassalle F, Marmontel O, Zawadzki C, Fretigny M, Bouvagnet P, Vinciguerra C.

Haemophilia. 2018 Jul;24(4):e213-e221. doi: 10.1111/hae.13480. Epub 2018 Apr 14.


Ancestral Genome Estimation Reveals the History of Ecological Diversification in Agrobacterium.

Lassalle F, Planel R, Penel S, Chapulliot D, Barbe V, Dubost A, Calteau A, Vallenet D, Mornico D, Bigot T, Guéguen L, Vial L, Muller D, Daubin V, Nesme X.

Genome Biol Evol. 2017 Dec 1;9(12):3413-3431. doi: 10.1093/gbe/evx255.


Oral microbiomes from hunter-gatherers and traditional farmers reveal shifts in commensal balance and pathogen load linked to diet.

Lassalle F, Spagnoletti M, Fumagalli M, Shaw L, Dyble M, Walker C, Thomas MG, Bamberg Migliano A, Balloux F.

Mol Ecol. 2018 Jan;27(1):182-195. doi: 10.1111/mec.14435. Epub 2017 Dec 14.


Islands of linkage in an ocean of pervasive recombination reveals two-speed evolution of human cytomegalovirus genomes.

Lassalle F, Depledge DP, Reeves MB, Brown AC, Christiansen MT, Tutill HJ, Williams RJ, Einer-Jensen K, Holdstock J, Atkinson C, Brown JR, van Loenen FB, Clark DA, Griffiths PD, Verjans GMGM, Schutten M, Milne RSB, Balloux F, Breuer J.

Virus Evol. 2016 Jun 15;2(1):vew017. doi: 10.1093/ve/vew017. eCollection 2016 Jan.


Ecological speciation in bacteria: reverse ecology approaches reveal the adaptive part of bacterial cladogenesis.

Lassalle F, Muller D, Nesme X.

Res Microbiol. 2015 Dec;166(10):729-41. doi: 10.1016/j.resmic.2015.06.008. Epub 2015 Jul 17. Review.


Inferring horizontal gene transfer.

Ravenhall M, Škunca N, Lassalle F, Dessimoz C.

PLoS Comput Biol. 2015 May 28;11(5):e1004095. doi: 10.1371/journal.pcbi.1004095. eCollection 2015 May.


GC-Content evolution in bacterial genomes: the biased gene conversion hypothesis expands.

Lassalle F, Périan S, Bataillon T, Nesme X, Duret L, Daubin V.

PLoS Genet. 2015 Feb 6;11(2):e1004941. doi: 10.1371/journal.pgen.1004941. eCollection 2015 Feb.


Single acquisition of protelomerase gave rise to speciation of a large and diverse clade within the Agrobacterium/Rhizobium supercluster characterized by the presence of a linear chromid.

Ramírez-Bahena MH, Vial L, Lassalle F, Diel B, Chapulliot D, Daubin V, Nesme X, Muller D.

Mol Phylogenet Evol. 2014 Apr;73:202-7. doi: 10.1016/j.ympev.2014.01.005. Epub 2014 Jan 17.


Life in an arsenic-containing gold mine: genome and physiology of the autotrophic arsenite-oxidizing bacterium rhizobium sp. NT-26.

Andres J, Arsène-Ploetze F, Barbe V, Brochier-Armanet C, Cleiss-Arnold J, Coppée JY, Dillies MA, Geist L, Joublin A, Koechler S, Lassalle F, Marchal M, Médigue C, Muller D, Nesme X, Plewniak F, Proux C, Ramírez-Bahena MH, Schenowitz C, Sismeiro O, Vallenet D, Santini JM, Bertin PN.

Genome Biol Evol. 2013;5(5):934-53. doi: 10.1093/gbe/evt061.


TPMS: a set of utilities for querying collections of gene trees.

Bigot T, Daubin V, Lassalle F, Perrière G.

BMC Bioinformatics. 2013 Mar 27;14:109. doi: 10.1186/1471-2105-14-109.


Genomic species are ecological species as revealed by comparative genomics in Agrobacterium tumefaciens.

Lassalle F, Campillo T, Vial L, Baude J, Costechareyre D, Chapulliot D, Shams M, Abrouk D, Lavire C, Oger-Desfeux C, Hommais F, Guéguen L, Daubin V, Muller D, Nesme X.

Genome Biol Evol. 2011;3:762-81. doi: 10.1093/gbe/evr070. Epub 2011 Jul 27.


Simultaneous colorectal and hepatic resections for colorectal cancer: postoperative and longterm outcomes.

de Santibañes E, Lassalle FB, McCormack L, Pekolj J, Quintana GO, Vaccaro C, Benati M.

J Am Coll Surg. 2002 Aug;195(2):196-202.


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