Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 40

1.

Studies in the Stypella vermiformis group (Auriculariales, Basidiomycota).

Spirin V, Malysheva V, Haelewaters D, Larsson KH.

Antonie Van Leeuwenhoek. 2018 Dec 8. doi: 10.1007/s10482-018-01209-9. [Epub ahead of print]

PMID:
30535961
2.

Additions to the taxonomy of Lagarobasidium and Xylodon (Hymenochaetales, Basidiomycota).

Viner I, Spirin V, Zíbarová L, Larsson KH.

MycoKeys. 2018 Oct 23;(41):65-90. doi: 10.3897/mycokeys.41.28987. eCollection 2018.

3.

The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications.

Nilsson RH, Larsson KH, Taylor AFS, Bengtsson-Palme J, Jeppesen TS, Schigel D, Kennedy P, Picard K, Glöckner FO, Tedersoo L, Saar I, Kõljalg U, Abarenkov K.

Nucleic Acids Res. 2019 Jan 8;47(D1):D259-D264. doi: 10.1093/nar/gky1022.

4.

Considerations and consequences of allowing DNA sequence data as types of fungal taxa.

Zamora JC, Svensson M, Kirschner R, Olariaga I, Ryman S, Parra LA, Geml J, Rosling A, Adamčík S, Ahti T, Aime MC, Ainsworth AM, Albert L, Albertó E, García AA, Ageev D, Agerer R, Aguirre-Hudson B, Ammirati J, Andersson H, Angelini C, Antonín V, Aoki T, Aptroot A, Argaud D, Sosa BIA, Aronsen A, Arup U, Asgari B, Assyov B, Atienza V, Bandini D, Baptista-Ferreira JL, Baral HO, Baroni T, Barreto RW, Beker H, Bell A, Bellanger JM, Bellù F, Bemmann M, Bendiksby M, Bendiksen E, Bendiksen K, Benedek L, Bérešová-Guttová A, Berger F, Berndt R, Bernicchia A, Biketova AY, Bizio E, Bjork C, Boekhout T, Boertmann D, Böhning T, Boittin F, Boluda CG, Boomsluiter MW, Borovička J, Brandrud TE, Braun U, Brodo I, Bulyonkova T, Burdsall HH Jr, Buyck B, Burgaz AR, Calatayud V, Callac P, Campo E, Candusso M, Capoen B, Carbó J, Carbone M, Castañeda-Ruiz RF, Castellano MA, Chen J, Clerc P, Consiglio G, Corriol G, Courtecuisse R, Crespo A, Cripps C, Crous PW, da Silva GA, da Silva M, Dam M, Dam N, Dämmrich F, Das K, Davies L, De Crop E, De Kesel A, De Lange R, De Madrignac Bonzi B, Dela Cruz TEE, Delgat L, Demoulin V, Desjardin DE, Diederich P, Dima B, Dios MM, Divakar PK, Douanla-Meli C, Douglas B, Drechsler-Santos ER, Dyer PS, Eberhardt U, Ertz D, Esteve-Raventós F, Salazar JAE, Evenson V, Eyssartier G, Farkas E, Favre A, Fedosova AG, Filippa M, Finy P, Flakus A, Fos S, Fournier J, Fraiture A, Franchi P, Molano AEF, Friebes G, Frisch A, Fryday A, Furci G, Márquez RG, Garbelotto M, García-Martín JM, Otálora MAG, Sánchez DG, Gardiennet A, Garnica S, Benavent IG, Gates G, da Cruz Lima Gerlach A, Ghobad-Nejhad M, Gibertoni TB, Grebenc T, Greilhuber I, Grishkan B, Groenewald JZ, Grube M, Gruhn G, Gueidan C, Gulden G, Gusmão LF, Hafellner J, Hairaud M, Halama M, Hallenberg N, Halling RE, Hansen K, Harder CB, Heilmann-Clausen J, Helleman S, Henriot A, Hernandez-Restrepo M, Herve R, Hobart C, Hoffmeister M, Høiland K, Holec J, Holien H, Hughes K, Hubka V, Huhtinen S, Ivančević B, Jagers M, Jaklitsch W, Jansen A, Jayawardena RS, Jeppesen TS, Jeppson M, Johnston P, Jørgensen PM, Kärnefelt I, Kalinina LB, Kantvilas G, Karadelev M, Kasuya T, Kautmanová I, Kerrigan RW, Kirchmair M, Kiyashko A, Knapp DG, Knudsen H, Knudsen K, Knutsson T, Kolařík M, Kõljalg U, Košuthová A, Koszka A, Kotiranta H, Kotkova V, Koukol O, Kout J, Kovács GM, Kříž M, Kruys Å, Kučera V, Kudzma L, Kuhar F, Kukwa M, Arun Kumar TK, Kunca V, Kušan I, Kuyper TW, Lado C, Læssøe T, Lainé P, Langer E, Larsson E, Larsson KH, Laursen G, Lechat C, Lee S, Lendemer JC, Levin L, Lindemann U, Lindström H, Liu X, Hernandez RCL, Llop E, Locsmándi C, Lodge DJ, Loizides M, Lőkös L, Luangsa-Ard J, Lüderitz M, Lumbsch T, Lutz M, Mahoney D, Malysheva E, Malysheva V, Manimohan P, Marin-Felix Y, Marques G, Martínez-Gil R, Marson G, Mata G, Matheny PB, Mathiassen GH, Matočec N, Mayrhofer H, Mehrabi M, Melo I, Mešić A, Methven AS, Miettinen O, Romero AMM, Miller AN, Mitchell JK, Moberg R, Moreau PA, Moreno G, Morozova O, Morte A, Muggia L, González GM, Myllys L, Nagy I, Nagy LG, Neves MA, Niemelä T, Nimis PL, Niveiro N, Noordeloos ME, Nordin A, Noumeur SR, Novozhilov Y, Nuytinck J, Ohenoja E, Fiuza PO, Orange A, Ordynets A, Ortiz-Santana B, Pacheco L, Pál-Fám F, Palacio M, Palice Z, Papp V, Pärtel K, Pawlowska J, Paz A, Peintner U, Pennycook S, Pereira OL, Daniëls PP, Pérez-De-Gregorio Capella MÀ, Del Amo CMP, Gorjón SP, Pérez-Ortega S, Pérez-Vargas I, Perry BA, Petersen JH, Petersen RH, Pfister DH, Phukhamsakda C, Piątek M, Piepenbring M, Pino-Bodas R, Esquivel JPP, Pirot P, Popov ES, Popoff O, Álvaro MP, Printzen C, Psurtseva N, Purahong W, Quijada L, Rambold G, Ramírez NA, Raja H, Raspé O, Raymundo T, Réblová M, Rebriev YA, de Dios Reyes García J, Ripoll MÁR, Richard F, Richardson MJ, Rico VJ, Robledo GL, Barbosa FR, Rodriguez-Caycedo C, Rodriguez-Flakus P, Ronikier A, Casas LR, Rusevska K, Saar G, Saar I, Salcedo I, Martínez SMS, Montoya CAS, Sánchez-Ramírez S, Sandoval-Sierra JV, Santamaria S, Monteiro JS, Schroers HJ, Schulz B, Schmidt-Stohn G, Schumacher T, Senn-Irlet B, Ševčíková H, Shchepin O, Shirouzu T, Shiryaev A, Siepe K, Sir EB, Sohrabi M, Soop K, Spirin V, Spribille T, Stadler M, Stalpers J, Stenroos S, Suija A, Sunhede S, Svantesson S, Svensson S, Svetasheva TY, Świerkosz K, Tamm H, Taskin H, Taudière A, Tedebrand JO, Lahoz RT, Temina M, Thell A, Thines M, Thor G, Thüs H, Tibell L, Tibell S, Timdal E, Tkalčec Z, Tønsberg T, Trichies G, Triebel D, Tsurykau A, Tulloss RE, Tuovinen V, Sosa MU, Urcelay C, Valade F, Garza RV, van den Boom P, Van Vooren N, Vasco-Palacios AM, Vauras J, Velasco Santos JM, Vellinga E, Verbeken A, Vetlesen P, Vizzini A, Voglmayr H, Volobuev S, von Brackel W, Voronina E, Walther G, Watling R, Weber E, Wedin M, Weholt Ø, Westberg M, Yurchenko E, Zehnálek P, Zhang H, Zhurbenko MP, Ekman S.

IMA Fungus. 2018 Jun;9(1):167-175. doi: 10.5598/imafungus.2018.09.01.10. Epub 2018 May 24.

5.

Short-spored Subulicystidium (Trechisporales, Basidiomycota): high morphological diversity and only partly clear species boundaries.

Ordynets A, Scherf D, Pansegrau F, Denecke J, Lysenko L, Larsson KH, Langer E.

MycoKeys. 2018 Jun 27;(35):41-99. doi: 10.3897/mycokeys.35.25678. eCollection 2018.

6.

Cryptic Species - More Than Terminological Chaos: A Reply to Heethoff.

Struck TH, Feder JL, Bendiksby M, Birkeland S, Cerca J, Gusarov VI, Kistenich S, Larsson KH, Liow LH, Nowak MD, Stedje B, Bachmann L, Dimitrov D.

Trends Ecol Evol. 2018 May;33(5):310-312. doi: 10.1016/j.tree.2018.02.008. Epub 2018 Mar 24. No abstract available.

PMID:
29588071
7.

Aphyllophoroid fungi in insular woodlands of eastern Ukraine.

Ordynets A, Savchenko A, Akulov A, Yurchenko E, Malysheva VF, Kõljalg U, Vlasák J, Larsson KH, Langer E.

Biodivers Data J. 2017 Dec 22;(5):e22426. doi: 10.3897/BDJ.5.e22426. eCollection 2017.

8.

Finding Evolutionary Processes Hidden in Cryptic Species.

Struck TH, Feder JL, Bendiksby M, Birkeland S, Cerca J, Gusarov VI, Kistenich S, Larsson KH, Liow LH, Nowak MD, Stedje B, Bachmann L, Dimitrov D.

Trends Ecol Evol. 2018 Mar;33(3):153-163. doi: 10.1016/j.tree.2017.11.007. Epub 2017 Dec 11.

PMID:
29241941
9.

A revised family-level classification of the Polyporales (Basidiomycota).

Justo A, Miettinen O, Floudas D, Ortiz-Santana B, Sjökvist E, Lindner D, Nakasone K, Niemelä T, Larsson KH, Ryvarden L, Hibbett DS.

Fungal Biol. 2017 Sep;121(9):798-824. doi: 10.1016/j.funbio.2017.05.010. Epub 2017 Jun 16.

PMID:
28800851
10.

Survey of corticioid fungi in North American pinaceous forests reveals hyperdiversity, underpopulated sequence databases, and species that are potentially ectomycorrhizal.

Rosenthal LM, Larsson KH, Branco S, Chung JA, Glassman SI, Liao HL, Peay KG, Smith DP, Talbot JM, Taylor JW, Vellinga EC, Vilgalys R, Bruns TD.

Mycologia. 2017;109(1):115-127. doi: 10.1080/00275514.2017.1281677. Epub 2017 Jan 19.

PMID:
28402791
11.

Comparative Genomics of Early-Diverging Mushroom-Forming Fungi Provides Insights into the Origins of Lignocellulose Decay Capabilities.

Nagy LG, Riley R, Tritt A, Adam C, Daum C, Floudas D, Sun H, Yadav JS, Pangilinan J, Larsson KH, Matsuura K, Barry K, Labutti K, Kuo R, Ohm RA, Bhattacharya SS, Shirouzu T, Yoshinaga Y, Martin FM, Grigoriev IV, Hibbett DS.

Mol Biol Evol. 2016 Apr;33(4):959-70. doi: 10.1093/molbev/msv337. Epub 2015 Dec 10.

PMID:
26659563
12.

A Comprehensive, Automatically Updated Fungal ITS Sequence Dataset for Reference-Based Chimera Control in Environmental Sequencing Efforts.

Nilsson RH, Tedersoo L, Ryberg M, Kristiansson E, Hartmann M, Unterseher M, Porter TM, Bengtsson-Palme J, Walker DM, de Sousa F, Gamper HA, Larsson E, Larsson KH, Kõljalg U, Edgar RC, Abarenkov K.

Microbes Environ. 2015;30(2):145-50. doi: 10.1264/jsme2.ME14121. Epub 2015 Mar 19.

13.

Fungal biogeography. Global diversity and geography of soil fungi.

Tedersoo L, Bahram M, Põlme S, Kõljalg U, Yorou NS, Wijesundera R, Villarreal Ruiz L, Vasco-Palacios AM, Thu PQ, Suija A, Smith ME, Sharp C, Saluveer E, Saitta A, Rosas M, Riit T, Ratkowsky D, Pritsch K, Põldmaa K, Piepenbring M, Phosri C, Peterson M, Parts K, Pärtel K, Otsing E, Nouhra E, Njouonkou AL, Nilsson RH, Morgado LN, Mayor J, May TW, Majuakim L, Lodge DJ, Lee SS, Larsson KH, Kohout P, Hosaka K, Hiiesalu I, Henkel TW, Harend H, Guo LD, Greslebin A, Grelet G, Geml J, Gates G, Dunstan W, Dunk C, Drenkhan R, Dearnaley J, De Kesel A, Dang T, Chen X, Buegger F, Brearley FQ, Bonito G, Anslan S, Abell S, Abarenkov K.

Science. 2014 Nov 28;346(6213):1256688. doi: 10.1126/science.1256688.

14.

Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi.

Schoch CL, Robbertse B, Robert V, Vu D, Cardinali G, Irinyi L, Meyer W, Nilsson RH, Hughes K, Miller AN, Kirk PM, Abarenkov K, Aime MC, Ariyawansa HA, Bidartondo M, Boekhout T, Buyck B, Cai Q, Chen J, Crespo A, Crous PW, Damm U, De Beer ZW, Dentinger BT, Divakar PK, Dueñas M, Feau N, Fliegerova K, García MA, Ge ZW, Griffith GW, Groenewald JZ, Groenewald M, Grube M, Gryzenhout M, Gueidan C, Guo L, Hambleton S, Hamelin R, Hansen K, Hofstetter V, Hong SB, Houbraken J, Hyde KD, Inderbitzin P, Johnston PR, Karunarathna SC, Kõljalg U, Kovács GM, Kraichak E, Krizsan K, Kurtzman CP, Larsson KH, Leavitt S, Letcher PM, Liimatainen K, Liu JK, Lodge DJ, Luangsa-ard JJ, Lumbsch HT, Maharachchikumbura SS, Manamgoda D, Martín MP, Minnis AM, Moncalvo JM, Mulè G, Nakasone KK, Niskanen T, Olariaga I, Papp T, Petkovits T, Pino-Bodas R, Powell MJ, Raja HA, Redecker D, Sarmiento-Ramirez JM, Seifert KA, Shrestha B, Stenroos S, Stielow B, Suh SO, Tanaka K, Tedersoo L, Telleria MT, Udayanga D, Untereiner WA, Diéguez Uribeondo J, Subbarao KV, Vágvölgyi C, Visagie C, Voigt K, Walker DM, Weir BS, Weiß M, Wijayawardene NN, Wingfield MJ, Xu JP, Yang ZL, Zhang N, Zhuang WY, Federhen S.

Database (Oxford). 2014 Jun 30;2014. pii: bau061. doi: 10.1093/database/bau061. Print 2014.

15.

Stereopsidales--a new order of mushroom-forming fungi.

Sjökvist E, Pfeil BE, Larsson E, Larsson KH.

PLoS One. 2014 Apr 28;9(4):e95227. doi: 10.1371/journal.pone.0095227. eCollection 2014. Erratum in: PLoS One. 2014;9(8):e106204.

16.

Towards a unified paradigm for sequence-based identification of fungi.

Kõljalg U, Nilsson RH, Abarenkov K, Tedersoo L, Taylor AF, Bahram M, Bates ST, Bruns TD, Bengtsson-Palme J, Callaghan TM, Douglas B, Drenkhan T, Eberhardt U, Dueñas M, Grebenc T, Griffith GW, Hartmann M, Kirk PM, Kohout P, Larsson E, Lindahl BD, Lücking R, Martín MP, Matheny PB, Nguyen NH, Niskanen T, Oja J, Peay KG, Peintner U, Peterson M, Põldmaa K, Saag L, Saar I, Schüßler A, Scott JA, Senés C, Smith ME, Suija A, Taylor DL, Telleria MT, Weiss M, Larsson KH.

Mol Ecol. 2013 Nov;22(21):5271-7. doi: 10.1111/mec.12481. Epub 2013 Sep 24.

PMID:
24112409
17.

Phylogenetic and phylogenomic overview of the Polyporales.

Binder M, Justo A, Riley R, Salamov A, Lopez-Giraldez F, Sjökvist E, Copeland A, Foster B, Sun H, Larsson E, Larsson KH, Townsend J, Grigoriev IV, Hibbett DS.

Mycologia. 2013 Nov-Dec;105(6):1350-73. doi: 10.3852/13-003. Epub 2013 Aug 11.

PMID:
23935031
18.

Molecular analyses confirm Brevicellicium in Trechisporales.

Telleria MT, Melo I, Dueñas M, Larsson KH, Paz Martín MP.

IMA Fungus. 2013 Jul;4(1):21-8. doi: 10.5598/imafungus.2013.04.01.03. Epub 2013 Apr 4.

19.

Stipitate stereoid basidiocarps have evolved multiple times.

Sjökvist E, Larsson E, Eberhardt U, Ryvarden L, Larsson KH.

Mycologia. 2012 Sep-Oct;104(5):1046-55. doi: 10.3852/11-174. Epub 2012 Apr 9.

PMID:
22492407
20.

Tidying up international nucleotide sequence databases: ecological, geographical and sequence quality annotation of its sequences of mycorrhizal fungi.

Tedersoo L, Abarenkov K, Nilsson RH, Schüssler A, Grelet GA, Kohout P, Oja J, Bonito GM, Veldre V, Jairus T, Ryberg M, Larsson KH, Kõljalg U.

PLoS One. 2011;6(9):e24940. doi: 10.1371/journal.pone.0024940. Epub 2011 Sep 15.

21.

Towards standardization of the description and publication of next-generation sequencing datasets of fungal communities.

Henrik Nilsson R, Tedersoo L, Lindahl BD, Kjøller R, Carlsen T, Quince C, Abarenkov K, Pennanen T, Stenlid J, Bruns T, Larsson KH, Kõljalg U, Kauserud H.

New Phytol. 2011 Jul;191(2):314-8. doi: 10.1111/j.1469-8137.2011.03755.x. Epub 2011 May 9. No abstract available.

22.

Amylocorticiales ord. nov. and Jaapiales ord. nov.: early diverging clades of agaricomycetidae dominated by corticioid forms.

Binder M, Larsson KH, Matheny PB, Hibbett DS.

Mycologia. 2010 Jul-Aug;102(4):865-80.

PMID:
20648753
23.

The UNITE database for molecular identification of fungi--recent updates and future perspectives.

Abarenkov K, Henrik Nilsson R, Larsson KH, Alexander IJ, Eberhardt U, Erland S, Høiland K, Kjøller R, Larsson E, Pennanen T, Sen R, Taylor AF, Tedersoo L, Ursing BM, Vrålstad T, Liimatainen K, Peintner U, Kõljalg U.

New Phytol. 2010 Apr;186(2):281-5. doi: 10.1111/j.1469-8137.2009.03160.x. No abstract available.

24.
25.

Re-thinking the classification of corticioid fungi.

Larsson KH.

Mycol Res. 2007 Sep;111(Pt 9):1040-63. Epub 2007 Aug 16.

PMID:
17981020
26.

Species richness and community composition of mat-forming ectomycorrhizal fungi in old- and second-growth Douglas-fir forests of the HJ Andrews Experimental Forest, Oregon, USA.

Dunham SM, Larsson KH, Spatafora JW.

Mycorrhiza. 2007 Nov;17(8):633-645. doi: 10.1007/s00572-007-0141-6. Epub 2007 Jul 19.

PMID:
17638027
27.

A higher-level phylogenetic classification of the Fungi.

Hibbett DS, Binder M, Bischoff JF, Blackwell M, Cannon PF, Eriksson OE, Huhndorf S, James T, Kirk PM, Lücking R, Thorsten Lumbsch H, Lutzoni F, Matheny PB, McLaughlin DJ, Powell MJ, Redhead S, Schoch CL, Spatafora JW, Stalpers JA, Vilgalys R, Aime MC, Aptroot A, Bauer R, Begerow D, Benny GL, Castlebury LA, Crous PW, Dai YC, Gams W, Geiser DM, Griffith GW, Gueidan C, Hawksworth DL, Hestmark G, Hosaka K, Humber RA, Hyde KD, Ironside JE, Kõljalg U, Kurtzman CP, Larsson KH, Lichtwardt R, Longcore J, Miadlikowska J, Miller A, Moncalvo JM, Mozley-Standridge S, Oberwinkler F, Parmasto E, Reeb V, Rogers JD, Roux C, Ryvarden L, Sampaio JP, Schüssler A, Sugiyama J, Thorn RG, Tibell L, Untereiner WA, Walker C, Wang Z, Weir A, Weiss M, White MM, Winka K, Yao YJ, Zhang N.

Mycol Res. 2007 May;111(Pt 5):509-47. Epub 2007 Mar 13. Review.

PMID:
17572334
28.

Perspectives in the new Russulales.

Miller SL, Larsson E, Larsson KH, Verbeken A, Nuytinck J.

Mycologia. 2006 Nov-Dec;98(6):960-70.

PMID:
17486972
29.

The cantharelloid clade: dealing with incongruent gene trees and phylogenetic reconstruction methods.

Moncalvo JM, Nilsson RH, Koster B, Dunham SM, Bernauer T, Matheny PB, Porter TM, Margaritescu S, Weiss M, Garnica S, Danell E, Langer G, Langer E, Larsson E, Larsson KH, Vilgalys R.

Mycologia. 2006 Nov-Dec;98(6):937-48.

PMID:
17486970
30.

Hymenochaetales: a molecular phylogeny for the hymenochaetoid clade.

Larsson KH, Parmasto E, Fischer M, Langer E, Nakasone KK, Redhead SA.

Mycologia. 2006 Nov-Dec;98(6):926-36.

PMID:
17486969
31.

Taxonomic reliability of DNA sequences in public sequence databases: a fungal perspective.

Nilsson RH, Ryberg M, Kristiansson E, Abarenkov K, Larsson KH, Kõljalg U.

PLoS One. 2006 Dec 20;1:e59.

32.

Molecular phylogeny of Hyphoderma and the reinstatement of Peniophorella.

Larsson KH.

Mycol Res. 2007 Feb;111(Pt 2):186-95. Epub 2006 Dec 11.

PMID:
17164083
33.
34.
35.

Airborne fungal colonisation of coarse woody debris in North Temperate Picea abies forest: impact of season and local spatial scale.

Vasiliauskas R, Lygis V, Larsson KH, Stenlid J.

Mycol Res. 2005 Apr;109(Pt 4):487-96.

PMID:
15912937
36.

UNITE: a database providing web-based methods for the molecular identification of ectomycorrhizal fungi.

Kõljalg U, Larsson KH, Abarenkov K, Nilsson RH, Alexander IJ, Eberhardt U, Erland S, Høiland K, Kjøller R, Larsson E, Pennanen T, Sen R, Taylor AF, Tedersoo L, Vrålstad T, Ursing BM.

New Phytol. 2005 Jun;166(3):1063-8.

37.

High phylogenetic diversity among corticioid homobasidiomycetes.

Larsson KH, Larsson E, Kõljalg U.

Mycol Res. 2004 Sep;108(Pt 9):983-1002.

PMID:
15506012
38.

galaxieEST: addressing EST identity through automated phylogenetic analysis.

Nilsson RH, Rajashekar B, Larsson KH, Ursing BM.

BMC Bioinformatics. 2004 Jul 5;5:87.

39.

galaxie--CGI scripts for sequence identification through automated phylogenetic analysis.

Nilsson RH, Larsson KH, Ursing BM.

Bioinformatics. 2004 Jun 12;20(9):1447-52. Epub 2004 Feb 19.

PMID:
14976034
40.

Phylogenetic relationships of russuloid basidiomycetes with emphasis on aphyllophoralean taxa.

Larsson E, Larsson KH.

Mycologia. 2003 Nov-Dec;95(6):1037-65.

PMID:
21149013

Supplemental Content

Loading ...
Support Center