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Identification of Novel Genes and Biological Pathways That Overlap in Infectious and Nonallergic Diseases of the Upper and Lower Airways Using Network Analyses.

Baschal EE, Larson ED, Bootpetch Roberts TC, Pathak S, Frank G, Handley E, Dinwiddie J, Moloney M, Yoon PJ, Gubbels SP, Scholes MA, Cass SP, Jenkins HA, Frank DN, Yang IV, Schwartz DA, Ramakrishnan VR, Santos-Cortez RLP.

Front Genet. 2020 Jan 17;10:1352. doi: 10.3389/fgene.2019.01352. eCollection 2019.


Function, Innervation, and Neurotransmitter Signaling in Mice Lacking Type-II Taste Cells.

Larson ED, Vandenbeuch A, Anderson CB, Kinnamon SC.

eNeuro. 2020 Feb 3;7(1). pii: ENEURO.0339-19.2020. doi: 10.1523/ENEURO.0339-19.2020. Print 2020 Jan/Feb.


Ozone-induced enhancement of airway hyperreactivity in rhesus macaques: Effects of antioxidant treatment.

Flayer CH, Larson ED, Joseph A, Kao S, Qu W, Van Haren A, Royer CM, Miller LA, Capitanio JP, Sielecki T, Christofidou-Solomidou M, Haczku A.

J Allergy Clin Immunol. 2020 Jan;145(1):312-323. doi: 10.1016/j.jaci.2019.08.034. Epub 2019 Oct 15.


A Subset of Olfactory Sensory Neurons Express Forkhead Box J1-Driven eGFP.

Larson ED, Pathak S, Ramakrishnan VR, Finger TE.

Chem Senses. 2019 Oct 26;44(9):663-671. doi: 10.1093/chemse/bjz060.


Differential Expression of Mucins in Murine Olfactory Versus Respiratory Epithelium.

Kennel C, Gould EA, Larson ED, Salcedo E, Vickery T, Restrepo D, Ramakrishnan VR.

Chem Senses. 2019 Sep 7;44(7):511-521. doi: 10.1093/chemse/bjz046.


Expression of Bitter Taste Receptors and Solitary Chemosensory Cell Markers in the Human Sinonasal Cavity.

Chen J, Larson ED, Anderson CB, Agarwal P, Frank DN, Kinnamon SC, Ramakrishnan VR.

Chem Senses. 2019 Sep 7;44(7):483-495. doi: 10.1093/chemse/bjz042.


Response of Sulfolobus solfataricus Dpo4 polymerase in vitro to a DNA G-quadruplex.

Berroyer A, Alvarado G, Larson ED.

Mutagenesis. 2019 Sep 20;34(3):289-297. doi: 10.1093/mutage/gez010.


A2ML1 and otitis media: novel variants, differential expression, and relevant pathways.

Larson ED, Magno JPM, Steritz MJ, Llanes EGDV, Cardwell J, Pedro M, Roberts TB, Einarsdottir E, Rosanes RAQ, Greenlee C, Santos RAP, Yousaf A, Streubel SO, Santos ATR, Ruiz AG, Lagrana-Villagracia SM, Ray D, Yarza TKL, Scholes MA, Anderson CB, Acharya A; University of Washington Center for Mendelian Genomics, Gubbels SP, Bamshad MJ, Cass SP, Lee NR, Shaikh RS, Nickerson DA, Mohlke KL, Prager JD, Cruz TLG, Yoon PJ, Abes GT, Schwartz DA, Chan AL, Wine TM, Cutiongco-de la Paz EM, Friedman N, Kechris K, Kere J, Leal SM, Yang IV, Patel JA, Tantoco MLC, Riazuddin S, Chan KH, Mattila PS, Reyes-Quintos MRT, Ahmed ZM, Jenkins HA, Chonmaitree T, Hafrén L, Chiong CM, Santos-Cortez RLP.

Hum Mutat. 2019 Aug;40(8):1156-1171. doi: 10.1002/humu.23769. Epub 2019 May 21.


Deformable mapping technique to correlate lesions in digital breast tomosynthesis and automated breast ultrasound images.

Green CA, Goodsitt MM, Brock KK, Davis CL, Larson ED, Lau JH, Carson PL.

Med Phys. 2018 Oct;45(10):4402-4417. doi: 10.1002/mp.13113. Epub 2018 Aug 31.


Oxidative damage of SP-D abolishes control of eosinophil extracellular DNA trap formation.

Yousefi S, Sharma SK, Stojkov D, Germic N, Aeschlimann S, Ge MQ, Flayer CH, Larson ED, Redai IG, Zhang S, Koziol-White CJ, Karikó K, Simon HU, Haczku A.

J Leukoc Biol. 2018 Jul;104(1):205-214. doi: 10.1002/JLB.3AB1117-455R. Epub 2018 May 7.


Preliminary Clinical Experience with a Combined Automated Breast Ultrasound and Digital Breast Tomosynthesis System.

Larson ED, Lee WM, Roubidoux MA, Goodsitt MM, Lashbrook C, Davis CE, Kripfgans OD, Carson PL.

Ultrasound Med Biol. 2018 Mar;44(3):734-742. doi: 10.1016/j.ultrasmedbio.2017.12.003. Epub 2018 Jan 5.


A conserved maternal-specific repressive domain in Zelda revealed by Cas9-mediated mutagenesis in Drosophila melanogaster.

Hamm DC, Larson ED, Nevil M, Marshall KE, Bondra ER, Harrison MM.

PLoS Genet. 2017 Dec 19;13(12):e1007120. doi: 10.1371/journal.pgen.1007120. eCollection 2017 Dec.


Phosphodiesterases 3 and 4 Differentially Regulate the Funny Current, If, in Mouse Sinoatrial Node Myocytes.

St Clair JR, Larson ED, Sharpe EJ, Liao Z, Proenza C.

J Cardiovasc Dev Dis. 2017 Sep;4(3). pii: 10. doi: 10.3390/jcdd4030010. Epub 2017 Aug 1.


Breaking Steroid Resistance: Effect of Vitamin D on IL-23.

Flayer CH, Larson ED, Haczku A.

Am J Respir Cell Mol Biol. 2017 Sep;57(3):267-269. doi: 10.1165/rcmb.2017-0199ED. No abstract available.


RNA sequencing and pathway analysis identify tumor necrosis factor alpha driven small proline-rich protein dysregulation in chronic rhinosinusitis.

Ramakrishnan VR, Gonzalez JR, Cooper SE, Barham HP, Anderson CB, Larson ED, Cool CD, Diller JD, Jones K, Kinnamon SC.

Am J Rhinol Allergy. 2017 Sep 1;31(5):283-288. doi: 10.2500/ajra.2017.31.4457.


Human-derived gut microbiota modulates colonic secretion in mice by regulating 5-HT3 receptor expression via acetate production.

Bhattarai Y, Schmidt BA, Linden DR, Larson ED, Grover M, Beyder A, Farrugia G, Kashyap PC.

Am J Physiol Gastrointest Liver Physiol. 2017 Jul 1;313(1):G80-G87. doi: 10.1152/ajpgi.00448.2016. Epub 2017 Apr 13.


5-HT3A -driven green fluorescent protein delineates gustatory fibers innervating sour-responsive taste cells: A labeled line for sour taste?

Stratford JM, Larson ED, Yang R, Salcedo E, Finger TE.

J Comp Neurol. 2017 Jul 1;525(10):2358-2375. doi: 10.1002/cne.24209. Epub 2017 Apr 21.


Cyclic AMP reverses the effects of aging on pacemaker activity and If in sinoatrial node myocytes.

Sharpe EJ, Larson ED, Proenza C.

J Gen Physiol. 2017 Feb;149(2):237-247. doi: 10.1085/jgp.201611674. Epub 2017 Jan 5.


Automated Breast Ultrasound: Dual-Sided Compared with Single-Sided Imaging.

Larson ED, Lee WM, Roubidoux MA, Goodsitt MM, Lashbrook C, Zafar F, Kripfgans OD, Thomenius K, Carson PL.

Ultrasound Med Biol. 2016 Sep;42(9):2072-82. doi: 10.1016/j.ultrasmedbio.2016.05.001. Epub 2016 Jun 3.


Temporal alignment of pupillary response with stimulus events via deconvolution.

McCloy DR, Larson ED, Lau B, Lee AK.

J Acoust Soc Am. 2016 Mar;139(3):EL57-62. doi: 10.1121/1.4943787.


G-quadruplex DNA structures can interfere with uracil glycosylase activity in vitro.

Holton NW, Larson ED.

Mutagenesis. 2016 Jul;31(4):385-92. doi: 10.1093/mutage/gev083. Epub 2015 Dec 14.


The Role of 5-HT3 Receptors in Signaling from Taste Buds to Nerves.

Larson ED, Vandenbeuch A, Voigt A, Meyerhof W, Kinnamon SC, Finger TE.

J Neurosci. 2015 Dec 2;35(48):15984-95. doi: 10.1523/JNEUROSCI.1868-15.2015.


Sites of instability in the human TCF3 (E2A) gene adopt G-quadruplex DNA structures in vitro.

Williams JD, Fleetwood S, Berroyer A, Kim N, Larson ED.

Front Genet. 2015 May 11;6:177. doi: 10.3389/fgene.2015.00177. eCollection 2015.


Brownian dynamics simulations of coagulation of dilute uniform and anisotropic particles under shear flow spanning low to high Peclet numbers.

Mohammadi M, Larson ED, Liu J, Larson RG.

J Chem Phys. 2015 Jan 14;142(2):024108. doi: 10.1063/1.4905098.


Postsynaptic P2X3-containing receptors in gustatory nerve fibres mediate responses to all taste qualities in mice.

Vandenbeuch A, Larson ED, Anderson CB, Smith SA, Ford AP, Finger TE, Kinnamon SC.

J Physiol. 2015 Mar 1;593(5):1113-25. doi: 10.1113/jphysiol.2014.281014. Epub 2015 Jan 20.


Efficient detection of unpaired DNA requires a member of the rad54-like family of homologous recombination proteins.

Samarajeewa DA, Sauls PA, Sharp KJ, Smith ZJ, Xiao H, Groskreutz KM, Malone TL, Boone EC, Edwards KA, Shiu PK, Larson ED, Hammond TM.

Genetics. 2014 Nov;198(3):895-904. doi: 10.1534/genetics.114.168187. Epub 2014 Aug 21.


Complete atrial-specific knockout of sodium-calcium exchange eliminates sinoatrial node pacemaker activity.

Groenke S, Larson ED, Alber S, Zhang R, Lamp ST, Ren X, Nakano H, Jordan MC, Karagueuzian HS, Roos KP, Nakano A, Proenza C, Philipson KD, Goldhaber JI.

PLoS One. 2013 Nov 21;8(11):e81633. doi: 10.1371/journal.pone.0081633. eCollection 2013.


Depressed pacemaker activity of sinoatrial node myocytes contributes to the age-dependent decline in maximum heart rate.

Larson ED, St Clair JR, Sumner WA, Bannister RA, Proenza C.

Proc Natl Acad Sci U S A. 2013 Oct 29;110(44):18011-6. doi: 10.1073/pnas.1308477110. Epub 2013 Oct 15.


PKA-independent activation of I(f) by cAMP in mouse sinoatrial myocytes.

St Clair JR, Liao Z, Larson ED, Proenza C.

Channels (Austin). 2013 Jul-Aug;7(4):318-21. Epub 2013 Jun 11.


Development of selective comprehensive two-dimensional liquid chromatography with parallel first-dimension sampling and second-dimension separation--application to the quantitative analysis of furanocoumarins in apiaceous vegetables.

Larson ED, Groskreutz SR, Harmes DC, Gibbs-Hall IC, Trudo SP, Allen RC, Rutan SC, Stoll DR.

Anal Bioanal Chem. 2013 May;405(13):4639-53. doi: 10.1007/s00216-013-6758-8. Epub 2013 Feb 16.


Cellular context and multiple channel domains determine cAMP sensitivity of HCN4 channels: ligand-independent relief of autoinhibition in HCN4.

Liao Z, Lockhead D, St Clair JR, Larson ED, Wilson CE, Proenza C.

J Gen Physiol. 2012 Nov;140(5):557-66. doi: 10.1085/jgp.201210858.


OrbId: Origin-based identification of microRNA targets.

Filshtein TJ, Mackenzie CO, Dale MD, Dela-Cruz PS, Ernst DM, Frankenberger EA, He C, Heath KL, Jones AS, Jones DK, King ER, Maher MB, Mitchell TJ, Morgan RR, Sirobhushanam S, Halkyard SD, Tiwari KB, Rubin DA, Borchert GM, Larson ED.

Mob Genet Elements. 2012 Jul 1;2(4):184-192.


G-quadruplex recognition activities of E. Coli MutS.

Ehrat EA, Johnson BR, Williams JD, Borchert GM, Larson ED.

BMC Mol Biol. 2012 Jul 2;13:23. doi: 10.1186/1471-2199-13-23.


Comprehensive analysis of microRNA genomic loci identifies pervasive repetitive-element origins.

Borchert GM, Holton NW, Williams JD, Hernan WL, Bishop IP, Dembosky JA, Elste JE, Gregoire NS, Kim JA, Koehler WW, Lengerich JC, Medema AA, Nguyen MA, Ower GD, Rarick MA, Strong BN, Tardi NJ, Tasker NM, Wozniak DJ, Gatto C, Larson ED.

Mob Genet Elements. 2011 May;1(1):8-17.


Repression of human activation induced cytidine deaminase by miR-93 and miR-155.

Borchert GM, Holton NW, Larson ED.

BMC Cancer. 2011 Aug 10;11:347. doi: 10.1186/1471-2407-11-347.


Coal and biomass to fuels and power.

Williams RH, Liu G, Kreutz TG, Larson ED.

Annu Rev Chem Biomol Eng. 2011;2:529-53. doi: 10.1146/annurev-chembioeng-061010-114126. Review.


Myristoylated peptides potentiate the funny current (I(f)) in sinoatrial myocytes.

Liao Z, St Clair JR, Larson ED, Proenza C.

Channels (Austin). 2011 Mar-Apr;5(2):115-9. Epub 2011 Mar 1.


Phosphorylation and modulation of hyperpolarization-activated HCN4 channels by protein kinase A in the mouse sinoatrial node.

Liao Z, Lockhead D, Larson ED, Proenza C.

J Gen Physiol. 2010 Sep;136(3):247-58. doi: 10.1085/jgp.201010488. Epub 2010 Aug 16.


Histone H2A and H2B are monoubiquitinated at AID-targeted loci.

Borchert GM, Holton NW, Edwards KA, Vogel LA, Larson ED.

PLoS One. 2010 Jul 16;5(7):e11641. doi: 10.1371/journal.pone.0011641.


High-fidelity correction of genomic uracil by human mismatch repair activities.

Larson ED, Bednarski DW, Maizels N.

BMC Mol Biol. 2008 Oct 27;9:94. doi: 10.1186/1471-2199-9-94.


AID in antibody perfection.

Vallur AC, Yabuki M, Larson ED, Maizels N.

Cell Mol Life Sci. 2007 Mar;64(5):555-65.


MRE11/RAD50 cleaves DNA in the AID/UNG-dependent pathway of immunoglobulin gene diversification.

Larson ED, Cummings WJ, Bednarski DW, Maizels N.

Mol Cell. 2005 Nov 11;20(3):367-75.


MutSalpha binds to and promotes synapsis of transcriptionally activated immunoglobulin switch regions.

Larson ED, Duquette ML, Cummings WJ, Streiff RJ, Maizels N.

Curr Biol. 2005 Mar 8;15(5):470-4.


Transcription-coupled mutagenesis by the DNA deaminase AID.

Larson ED, Maizels N.

Genome Biol. 2004;5(3):211. Epub 2004 Feb 27. Review.


DNA bending and unbending by MutS govern mismatch recognition and specificity.

Wang H, Yang Y, Schofield MJ, Du C, Fridman Y, Lee SD, Larson ED, Drummond JT, Alani E, Hsieh P, Erie DA.

Proc Natl Acad Sci U S A. 2003 Dec 9;100(25):14822-7. Epub 2003 Nov 21.


DNA template requirements for human mismatch repair in vitro.

Iams K, Larson ED, Drummond JT.

J Biol Chem. 2002 Aug 23;277(34):30805-14. Epub 2002 Jun 19.


Characterization of microsatellite loci developed for the wattled curassow, Crax globulosa.

Hughes CR, Larson ED.

Mol Ecol. 2000 May;9(5):632-3. No abstract available.


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