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CRISPR interference to interrogate genes that control biofilm formation in Pseudomonas fluorescens.

Noirot-Gros MF, Forrester S, Malato G, Larsen PE, Noirot P.

Sci Rep. 2019 Nov 4;9(1):15954. doi: 10.1038/s41598-019-52400-5.


Pyrolytic carbon resonators for micromechanical thermal analysis.

Nguyen LQ, Larsen PE, Larsen T, Goswami SB, Villanueva LG, Boisen A, Keller SS.

Microsyst Nanoeng. 2019 Oct 21;5:58. doi: 10.1038/s41378-019-0094-x. eCollection 2019.


The lichen symbiosis re-viewed through the genomes of Cladonia grayi and its algal partner Asterochloris glomerata.

Armaleo D, Müller O, Lutzoni F, Andrésson ÓS, Blanc G, Bode HB, Collart FR, Dal Grande F, Dietrich F, Grigoriev IV, Joneson S, Kuo A, Larsen PE, Logsdon JM Jr, Lopez D, Martin F, May SP, McDonald TR, Merchant SS, Miao V, Morin E, Oono R, Pellegrini M, Rubinstein N, Sanchez-Puerta MV, Savelkoul E, Schmitt I, Slot JC, Soanes D, Szövényi P, Talbot NJ, Veneault-Fourrey C, Xavier BB.

BMC Genomics. 2019 Jul 23;20(1):605. doi: 10.1186/s12864-019-5629-x.


Treatment of edentulous mandible with metal-resin fixed complete dentures: A 15- to 20-year retrospective study.

McGlumphy EA, Hashemzadeh S, Yilmaz B, Purcell BA, Leach D, Larsen PE.

Clin Oral Implants Res. 2019 Aug;30(8):817-825. doi: 10.1111/clr.13488. Epub 2019 Jun 12.


Imaging of dehydration in particulate matter using Raman line-focus microscopy.

Okeyo PO, Ilchenko O, Slipets R, Larsen PE, Boisen A, Rades T, Rantanen J.

Sci Rep. 2019 May 17;9(1):7525. doi: 10.1038/s41598-019-43959-0.


Managing the Posterior Maxilla with Implants Using Bone Grafting to Enhance Implant Sites.

Larsen PE, Kennedy KS.

Oral Maxillofac Surg Clin North Am. 2019 May;31(2):299-308. doi: 10.1016/j.coms.2019.01.002. Epub 2019 Mar 7. Review.


Pseudomonas fluorescens increases mycorrhization and modulates expression of antifungal defense response genes in roots of aspen seedlings.

Shinde S, Zerbs S, Collart FR, Cumming JR, Noirot P, Larsen PE.

BMC Plant Biol. 2019 Jan 3;19(1):4. doi: 10.1186/s12870-018-1610-0.


Ultrasensitive Microstring Resonators for Solid State Thermomechanical Analysis of Small and Large Molecules.

Karl M, Larsen PE, Rangacharya VP, Hwu ET, Rantanen J, Boisen A, Rades T.

J Am Chem Soc. 2018 Dec 19;140(50):17522-17531. doi: 10.1021/jacs.8b09034. Epub 2018 Dec 5.


Development and Implementation of a Uniform Dental School-Wide Electronic Treatment Consenting Process for Patients.

Robinson FG, Fields HW, Ness GM, Heinlein DJ, Gellin RG, Larsen PE.

J Dent Educ. 2018 Sep;82(9):949-960. doi: 10.21815/JDE.018.097.


Modeling the Pseudomonas Sulfur Regulome by Quantifying the Storage and Communication of Information.

Larsen PE, Zerbs S, Laible PD, Collart FR, Korajczyk P, Dai Y, Noirot P.

mSystems. 2018 Jun 19;3(3). pii: e00189-17. doi: 10.1128/mSystems.00189-17. eCollection 2018 May-Jun.


Dynamics of Aspen Roots Colonization by Pseudomonads Reveals Strain-Specific and Mycorrhizal-Specific Patterns of Biofilm Formation.

Noirot-Gros MF, Shinde S, Larsen PE, Zerbs S, Korajczyk PJ, Kemner KM, Noirot PH.

Front Microbiol. 2018 May 3;9:853. doi: 10.3389/fmicb.2018.00853. eCollection 2018.


Early implant placement for a patient with ectodermal dysplasia: Thirteen years of clinical care.

Knobloch LA, Larsen PE, Saponaro PC, L'Homme-Langlois E.

J Prosthet Dent. 2018 May;119(5):702-709. doi: 10.1016/j.prosdent.2017.08.015. Epub 2017 Nov 29.


Pseudomonas fluorescens Transportome Is Linked to Strain-Specific Plant Growth Promotion in Aspen Seedlings under Nutrient Stress.

Shinde S, Cumming JR, Collart FR, Noirot PH, Larsen PE.

Front Plant Sci. 2017 Mar 21;8:348. doi: 10.3389/fpls.2017.00348. eCollection 2017.


Nanomechanical Infrared Spectroscopy with Vibrating Filters for Pharmaceutical Analysis.

Kurek M, Carnoy M, Larsen PE, Nielsen LH, Hansen O, Rades T, Schmid S, Boisen A.

Angew Chem Int Ed Engl. 2017 Mar 27;56(14):3901-3905. doi: 10.1002/anie.201700052. Epub 2017 Mar 7.


Nanomechanical Pyrolytic Carbon Resonators: Novel Fabrication Method and Characterization of Mechanical Properties.

Kurek M, Larsen FK, Larsen PE, Schmid S, Boisen A, Keller SS.

Sensors (Basel). 2016 Jul 15;16(7). pii: E1097. doi: 10.3390/s16071097.


More of an Art than a Science: Using Microbial DNA Sequences to Compose Music.

Larsen PE.

J Microbiol Biol Educ. 2016 Mar 1;17(1):129-32. doi: 10.1128/jmbe.v17i1.1028. eCollection 2016 Mar.


Nonlinear optomechanical measurement of mechanical motion.

Brawley GA, Vanner MR, Larsen PE, Schmid S, Boisen A, Bowen WP.

Nat Commun. 2016 Mar 21;7:10988. doi: 10.1038/ncomms10988.


Lateral tarsotomy: a practical alternative to lateral canthotomy to increase orbital access.

Emam HA, Stevens MR, Larsen PE, Jatana CA.

Oral Surg Oral Med Oral Pathol Oral Radiol. 2016 Jul;122(1):e1-4. doi: 10.1016/j.oooo.2016.02.003. Epub 2016 Feb 16.


Multi-Omics Approach Identifies Molecular Mechanisms of Plant-Fungus Mycorrhizal Interaction.

Larsen PE, Sreedasyam A, Trivedi G, Desai S, Dai Y, Cseke LJ, Collart FR.

Front Plant Sci. 2016 Jan 19;6:1061. doi: 10.3389/fpls.2015.01061. eCollection 2015.


Metabolome of human gut microbiome is predictive of host dysbiosis.

Larsen PE, Dai Y.

Gigascience. 2015 Sep 14;4:42. doi: 10.1186/s13742-015-0084-3. eCollection 2015.


Predicting Ecological Roles in the Rhizosphere Using Metabolome and Transportome Modeling.

Larsen PE, Collart FR, Dai Y.

PLoS One. 2015 Sep 2;10(9):e0132837. doi: 10.1371/journal.pone.0132837. eCollection 2015.


The Faculty Educator Development Award: A 12-Year Perspective on Success, Excellence, and Impact on the Specialty of Oral and Maxillofacial Surgery.

Tiwana PS, Larsen PE.

J Oral Maxillofac Surg. 2015 Sep;73(9):1670-1. doi: 10.1016/j.joms.2015.04.040. Epub 2015 May 13. No abstract available.


Using metabolomic and transportomic modeling and machine learning to identify putative novel therapeutic targets for antibiotic resistant Pseudomonad infections.

Larsen PE, Collart FR, Dai Y.

Conf Proc IEEE Eng Med Biol Soc. 2014;2014:314-7. doi: 10.1109/EMBC.2014.6943592.


Satellite remote sensing data can be used to model marine microbial metabolite turnover.

Larsen PE, Scott N, Post AF, Field D, Knight R, Hamada Y, Gilbert JA.

ISME J. 2015 Jan;9(1):166-79. doi: 10.1038/ismej.2014.107. Epub 2014 Jul 29.


Modeling forest ecosystem responses to elevated carbon dioxide and ozone using artificial neural networks.

Larsen PE, Cseke LJ, Miller RM, Collart FR.

J Theor Biol. 2014 Oct 21;359:61-71. doi: 10.1016/j.jtbi.2014.05.047. Epub 2014 Jun 10.


Low-power photothermal probing of single plasmonic nanostructures with nanomechanical string resonators.

Schmid S, Wu K, Larsen PE, Rindzevicius T, Boisen A.

Nano Lett. 2014 May 14;14(5):2318-21. doi: 10.1021/nl4046679. Epub 2014 Apr 7.


Topical application of a mucoadhesive freeze-dried black raspberry gel induces clinical and histologic regression and reduces loss of heterozygosity events in premalignant oral intraepithelial lesions: results from a multicentered, placebo-controlled clinical trial.

Mallery SR, Tong M, Shumway BS, Curran AE, Larsen PE, Ness GM, Kennedy KS, Blakey GH, Kushner GM, Vickers AM, Han B, Pei P, Stoner GD.

Clin Cancer Res. 2014 Apr 1;20(7):1910-24. doi: 10.1158/1078-0432.CCR-13-3159. Epub 2014 Jan 31.


Bone ingrowth and initial stability of titanium and porous tantalum dental implants: a pilot canine study.

Kim DG, Huja SS, Tee BC, Larsen PE, Kennedy KS, Chien HH, Lee JW, Wen HB.

Implant Dent. 2013 Aug;22(4):399-405. doi: 10.1097/ID.0b013e31829b17b5.


Inactivation of the microRNA-183/96/182 cluster results in syndromic retinal degeneration.

Lumayag S, Haldin CE, Corbett NJ, Wahlin KJ, Cowan C, Turturro S, Larsen PE, Kovacs B, Witmer PD, Valle D, Zack DJ, Nicholson DA, Xu S.

Proc Natl Acad Sci U S A. 2013 Feb 5;110(6):E507-16. doi: 10.1073/pnas.1212655110. Epub 2013 Jan 22.


BowStrap v1.0: Assigning statistical significance to expressed genes using short-read transcriptome data.

Larsen PE, Collart FR.

BMC Res Notes. 2012 Jun 7;5:275. doi: 10.1186/1756-0500-5-275.


Modeling microbial community structure and functional diversity across time and space.

Larsen PE, Gibbons SM, Gilbert JA.

FEMS Microbiol Lett. 2012 Jul;332(2):91-8. doi: 10.1111/j.1574-6968.2012.02588.x. Epub 2012 May 28. Review.


Predicting bacterial community assemblages using an artificial neural network approach.

Larsen PE, Field D, Gilbert JA.

Nat Methods. 2012 Apr 15;9(6):621-5. doi: 10.1038/nmeth.1975.


Evaluation of a mucoadhesive fenretinide patch for local intraoral delivery: a strategy to reintroduce fenretinide for oral cancer chemoprevention.

Holpuch AS, Phelps MP, Desai KG, Chen W, Koutras GM, Han BB, Warner BM, Pei P, Seghi GA, Tong M, Border MB, Fields HW, Stoner GD, Larsen PE, Liu Z, Schwendeman SP, Mallery SR.

Carcinogenesis. 2012 May;33(5):1098-105. doi: 10.1093/carcin/bgs122. Epub 2012 Mar 15.


Using next generation transcriptome sequencing to predict an ectomycorrhizal metabolome.

Larsen PE, Sreedasyam A, Trivedi G, Podila GK, Cseke LJ, Collart FR.

BMC Syst Biol. 2011 May 13;5:70. doi: 10.1186/1752-0509-5-70.


Effects of human oral mucosal tissue, saliva, and oral microflora on intraoral metabolism and bioactivation of black raspberry anthocyanins.

Mallery SR, Budendorf DE, Larsen MP, Pei P, Tong M, Holpuch AS, Larsen PE, Stoner GD, Fields HW, Chan KK, Ling Y, Liu Z.

Cancer Prev Res (Phila). 2011 Aug;4(8):1209-21. doi: 10.1158/1940-6207.CAPR-11-0040. Epub 2011 May 10.


Predicted Relative Metabolomic Turnover (PRMT): determining metabolic turnover from a coastal marine metagenomic dataset.

Larsen PE, Collart FR, Field D, Meyer F, Keegan KP, Henry CS, McGrath J, Quinn J, Gilbert JA.

Microb Inform Exp. 2011 Jun 14;1(1):4. doi: 10.1186/2042-5783-1-4.


Using deep RNA sequencing for the structural annotation of the Laccaria bicolor mycorrhizal transcriptome.

Larsen PE, Trivedi G, Sreedasyam A, Lu V, Podila GK, Collart FR.

PLoS One. 2010 Jul 6;5(7):e9780. doi: 10.1371/journal.pone.0009780.


Effects of implant design and surface roughness on crestal bone and soft tissue levels in the esthetic zone.

Stein AE, McGlmphy EA, Johnston WM, Larsen PE.

Int J Oral Maxillofac Implants. 2009 Sep-Oct;24(5):910-9.


Distribution of anthocyanins delivered from a bioadhesive black raspberry gel following topical intraoral application in normal healthy volunteers.

Ugalde CM, Liu Z, Ren C, Chan KK, Rodrigo KA, Ling Y, Larsen PE, Chacon GE, Stoner GD, Mumper RJ, Fields HW, Mallery SR.

Pharm Res. 2009 Apr;26(4):977-86. doi: 10.1007/s11095-008-9806-x. Epub 2009 Jan 10.


Topical application of a bioadhesive black raspberry gel modulates gene expression and reduces cyclooxygenase 2 protein in human premalignant oral lesions.

Mallery SR, Zwick JC, Pei P, Tong M, Larsen PE, Shumway BS, Lu B, Fields HW, Mumper RJ, Stoner GD.

Cancer Res. 2008 Jun 15;68(12):4945-57. doi: 10.1158/0008-5472.CAN-08-0568.


Effects of a topically applied bioadhesive berry gel on loss of heterozygosity indices in premalignant oral lesions.

Shumway BS, Kresty LA, Larsen PE, Zwick JC, Lu B, Fields HW, Mumper RJ, Stoner GD, Mallery SR.

Clin Cancer Res. 2008 Apr 15;14(8):2421-30. doi: 10.1158/1078-0432.CCR-07-4096.


Formulation and in-vitro and in-vivo evaluation of a mucoadhesive gel containing freeze dried black raspberries: implications for oral cancer chemoprevention.

Mallery SR, Stoner GD, Larsen PE, Fields HW, Rodrigo KA, Schwartz SJ, Tian Q, Dai J, Mumper RJ.

Pharm Res. 2007 Apr;24(4):728-37. Epub 2007 Feb 15.


The Ohio State University Oral and Maxillofacial Surgery Residency program.

Weaver JM, Chacon GE, Larsen PE.

J Oral Maxillofac Surg. 2006 Jul;64(7):1003-5. No abstract available.


Effect of alendronate on endosseous implant integration: an in vivo study in rabbits.

Chacon GE, Stine EA, Larsen PE, Beck FM, McGlumphy EA.

J Oral Maxillofac Surg. 2006 Jul;64(7):1005-9.


Heat production by 3 implant drill systems after repeated drilling and sterilization.

Chacon GE, Bower DL, Larsen PE, McGlumphy EA, Beck FM.

J Oral Maxillofac Surg. 2006 Feb;64(2):265-9.


A comparison of providers' and consumers' perceptions of facial-profile attractiveness.

Maple JR, Vig KW, Beck FM, Larsen PE, Shanker S.

Am J Orthod Dentofacial Orthop. 2005 Dec;128(6):690-6; quiz 801.


Pull-out strength of monocortical screws placed in the maxillae and mandibles of dogs.

Huja SS, Litsky AS, Beck FM, Johnson KA, Larsen PE.

Am J Orthod Dentofacial Orthop. 2005 Mar;127(3):307-13.


Prospective study of 429 hydroxyapatite-coated cylindric omniloc implants placed in 121 patients.

McGlumphy EA, Peterson LJ, Larsen PE, Jeffcoat MK.

Int J Oral Maxillofac Implants. 2003 Jan-Feb;18(1):82-92.


The great teaching case.

Larsen PE.

Oral Surg Oral Med Oral Pathol Oral Radiol Endod. 2003 Feb;95(2):127. No abstract available.


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